jgi.p|Nanoce1779_2|564896, gene_3117 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|564896
Unique Namegene_3117
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:694010..700446 +

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Properties
Property NameValue
TranscriptId564982
ProteinId564896
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:694010..700446 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0034061DNA polymerase activity
GO:0003676nucleic acid binding
GO:0004386helicase activity
GO:0005524ATP binding
GO:0003677DNA binding
GO:0003887DNA-directed DNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03120NO05G03120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|564896mRNA_3117-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|564896mRNA_3117Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|564896

>mRNA_3117-protein ID=mRNA_3117-protein|Name=jgi.p|Nanoce1779_2|564896|organism=Nannochloropsis oceanica|type=polypeptide|length=2058bp
MTYNARKSKRDTLRIRAFHGGTGGRGFGRCQIGVCTIEKANALVNKMIQE
ETIGQLSCLVVDELHMMADQQRGYLLELLLSKLKFLQQQQKRAVQKQPED
ATTAITTIGISSFASLTIRPLLDLQIIGLSATLPNLEEVAGWMDAAFFHT
TFRPVQLQETYKLGDGLYTAQGSLLRQLRPCRQPVQDPDHIVTLVEETTS
KGHQVLVFCHYRKHCESCAALLAEQLGELPAALVIWDGRGATEAGKGKES
DDVASKRQALLDTLRENSPTMHPCLMLAIPKGIGIHHAGLADYEKDALEE
AFRQGVLSVIVATSSLGTGINLPAARVIFRSLRAGANREFEISSYRQMAG
RAGRAGKSSYGESILLLKQPEDVNEALRLMTDPLPRLKSCLNPEMDGGRA
LVRAILEAIASGVLRQLGDLDTFLHCMLAVRQRSQNAAGLQAFLSHARSA
LCYLVEHRIVEEQPHDPNSAAGLQKLKQEEGENYEGASAGGESVSSAAAA
PAAVAAAVSVFPTARVAKQLAATKLGHALFQSSFAPDEGLLVFQDLKRAR
MRLVLDSDLHLLYLVTPVFHGLQPDFNRLWNIYDRARRADPVKALVFELV
GLDEAHFDRWSRQPPSSGAGTALGPLLHIPVTDAETTTAGPKHRAGAAVT
MGFLADEQLAIMRARRLWGALALHDLVVSECSLDATAAMYQVDRGSLQAL
QQSATSYAGMVKSFLTQLDWTLMVRALENAGIAVSGEKGKELVSLMQIPR
LELSLARALYNADVQTVAAVASEPVEHLADIVRKVRPFTAAKSSGNKGVE
GGVNQDELAFYDEAAHRLRDVAQFVLTREEKHRKTRLEQLQEKLGNEMHD
DSTGERVDPDSSSDSGDDVATSANVALDNGIVSHLSSYQSTIPFQSVRFS
IGNDGGGTGSGLSTICQVQSMRSDIPSKTFFETPVAVRKAALRPEDYPLH
LCVRTPTRTPSSPGQYLYIPQVPSDCSDQQALRLPAHEVFTAPGGNGARG
RLQDGPRGVEFVPEGLLFPSACVSAAESHAFSDLTASWSKASCYSLMLHF
RSLPSLSGWDERILPSSSFSLDASGFWRYATKTTPYPVMAGKRQQAFYNP
RDENVILCGVAISLDGRRSTYCWLPPPFSPRPFERFACLGDEKSSPDGRG
ATIDSGAGAIAGAIGPAEATSNFKRPYSAYVASPAPASLQTLPEKNITLV
FSFLGYAPCRSAGSATDLHGGRGLDSRQPYHLKQQAAPHLYSNPAMLICR
RWNRIGCAWFNKHVSLRGWERVKWLLAQQGPVKILWDAPMVLAALRERNI
MVAGPLEDPKVGLALLGQDRLKSGPAGASHSGPLQLLELPPGCEERHVEL
VAAQAAGLLQLGAAVEEDLAAHQLLEPFRLIEMPLAPVLAEMQFYGMRVD
RSWFPGVLLAIQERLLLLQDLADAFGGFHLNLNCQDSVHHLLYVALRLPP
PAKWSKKTNVWGGKGHSNKTVLGPVQSDWLESMTNASPAVKIVLEWRRLS
KALQNLQKLRSCTRLQPLLGSHRVRCRLDQCGTATGRIILSEPAMQQVAH
EVTLRQTVRDTIQDEVESQTGGKGAASAAALSSPPLPPELFTDDVAAALD
PVNAMPTENLAEPPHRMPTRQSGLAVAAVRADSYLWANASTNKAADGEIA
AHRATSQFGTLRCILSARISEPFMHYQLRHFPPLELTQEQQLLLLPPVQS
TVESTSTISVMTLADYWRSRGFNYSNDDAARIRQCVVEFPPGVVLTYPAD
KVFRRPDIIRDPQAIAQAVYDDIVTPAVALSPRNAFIAPRGCLLLSADYS
QIELHILAHFSKDPLLCEALNRHEDVFRSLAASWKRVSIESVTPTMRDEA
KQLAYAVLYGQSVTATAQLFAISTVEADKLRSSFLGTYPGIRSFIGSCKD
FCRAHGYVETLLGRRRYLPGIQSSDAGDRAQAERQSVNSVCQGSAADLIK
LAMVNIYHELERLQHGVGNGSDGGGSGGSCNGGNGESGSLGDIHDCRLVL
QIHDELLFEVKESMISEIMRIVKRCMEGAICLKVPLKVNLKIGPSWGALV
EDKAKAN*
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Synonyms
Publications