jgi.p|Nanoce1779_2|548962, gene_1332 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|548962
Unique Namegene_1332
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:297229..300427 -

Link to JBrowse

Properties
Property NameValue
TranscriptId549048
ProteinId548962
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:297229..300427 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006855drug transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015297antiporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01530NO03G01530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|548962mRNA_1332-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|548962mRNA_1332Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|548962

>mRNA_1332-protein ID=mRNA_1332-protein|Name=jgi.p|Nanoce1779_2|548962|organism=Nannochloropsis oceanica|type=polypeptide|length=607bp
MRRLQIILQLSVLVGVAAAFTSLSTITHRYDSSSGSTGGRSSGGGREGGS
SRTCRFWPTTQRKLLCTAIPPTPLSASGVGNSDSSLSQHSHLHHQPPAAA
TTTVEVAHGHSVAHGGRRQGMLRSLRSGWTKLVTPQEYDRQIWELALPTL
GAVLIDPCLSLVDTMFVGKLGHIALASMGPCTALYNMIFATASCMFSVST
AVLIARYKALGDREATGRTIFTGMASALTLGIFFTMLMASRPAAALRLMG
ASSPDMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVV
GLINLILDPLLMFKFGLGVKGAAMATAIAQWIGALSYVIKMARKKEIFGL
NLGLKVIPKIEDVKEFWTAGVAMLFRSLCNVGAWTLMASIATRMGVVEIA
AHQLILSMWLVIAFVQDAVGAAGQVLVSQQMGHSGSSRHAIRRGKARARA
IAKRAISFSAVIGLVLSLVSQMVLPSLIPLFCSSPEVVALTSSVLPIVLL
GFPICCVVWTWDSVYYGASDFKYNAKVIAMSSSIAVSLTLASLHYEWGLI
GLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLSLSEGDDGGGQTMMNE
AVPQIS*
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Synonyms
Publications