jgi.p|Nanoce1779_2|645231, gene_1232 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|645231
Unique Namegene_1232
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:31751..43292 -

Link to JBrowse

Properties
Property NameValue
TranscriptId645317
ProteinId645231
Product nameHistone acetylation protein-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:31751..43292 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003712transcription coregulator activity
GO:0004402histone acetyltransferase activity
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00540NO03G00540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|645231mRNA_1232-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|645231mRNA_1232Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|645231

>mRNA_1232-protein ID=mRNA_1232-protein|Name=jgi.p|Nanoce1779_2|645231|organism=Nannochloropsis oceanica|type=polypeptide|length=2205bp
MAVLIQGVQVTGSQPPPPAVIGGGGPGGGGGGVPQPYIPQQQQQQQQQQQ
VQQVVAPPLGGTIMPQKESQRGGSQQGGRAGGQQQQQQQQQQQQQQQQQQ
HQPGATGGVSYPPSQQQGGGIIAGGRGGGGRYPNPQLQQQLQQHQQRGPM
PSSGQGQQQVFILQQQQHQHPRGSAVNGPSPQQQQQQQQQQQQQQRMPQQ
QQRQQQPGGAQGMVSLQHQQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQHQQQQHQQQQQQQHQQHQQHQQQQQQQQQQQQQQQQQQQQQQQQRQL
QPSLQTPSALVSGAPGDIVAGGGPPPQQQQQQQTQQQQQRTSLSNQPQSE
QHRALRTEMVKNIMQLLQQRKPVPDPNKPLVVDRLNEMAIRLEDYLWKRS
STVEEYSNLHTLKHRLQCLAVYMGKHHQRSSQSPGQGPGEPGALGVGGGG
GGMRQLMGQSGTPGGGSQKALPLAGAGPGQLQRMVPTANASNIHLPNPHQ
GGMPGGGGMGAGAVVRPGGRGGGIGGGGLIMQPGSAIHGHPPGPNLGGNM
LPQGGMQQQKQQQQQRRPGGGAQPLEQGGQGGQQFFHHQQQQQQQQGQGG
RGGGRAGPAPVNGGGNFPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QHQQQQLQQQQFLQQQQQQQQQQQQQQPPHKVPGGAQLLAVGRSGMNNNV
STNNSNIGNINTNRNQPPMPLPTGPGGGPPTSQQQRMQHTPEQRQQILHQ
QQQRLLYLRHASKCIHVDGRCPQGYPNCKGMKELWKHIASCREQRCQFPH
CVSSRYVLSHYHKCKDTNCPVCGPVRNTIRSSRNASQPMPQLNQGGVGGV
MPVPGQPQPQPQQQSQQQQQQQQQQQQQQQQMYIPQQQQQQLQQGMGGGR
GGLMPIQAQPLIGGRGGRGGVRQKGKAGQVVQQQQQQQQQQAMLPAMADQ
LQVAGGGVGLTKEQLLQQQQQQQMQRQHQGLTPLSGHGIVKRQGGTEGVG
GGAGGRGVSPRGGGQQHRVAMTKNGPMIKLESHGWVPAQQLPNNQGFRPL
LPLPAPAQQLQGQPLRGGMVGSPMPAGRGGMVPKAIPPPPPSVAAPPPPT
AAMLQRFEDSVSLVNSFTDAQIKAHMESLRAGGAFMTPAKLKVKLLPLIL
KQLKSEYGWIFEEPVDPAKLGLPDYFDVIKHPMDLGTVKRRLENCSYTEM
EKAAADVKLTFDNAILYNPPGQEIHRVAKDMRDSFFRDFRQLEDEIRREE
KMTVNRGESCILCGCEKLYFEPAVYYCNGSCNSSRIRRSSYFYTGGRNQY
HWCVPCYQEIKGEEIHIGGTVLKKSELIKEKNIKQREESWVACDECSQWV
HQVCALYNGRNDQGESVKYYCPSCTIARRQKLPNGGIPSTPPLSAKFIKH
NKFSAFIEKRVHLKYNECYEALLKDARKEHKPKIQAERVRNAVYIRQVLS
TDKTFPVRERMLKRYAAQDYPNEFPAKSKCLVLFQNIDGVDVILFAMYVY
EYGHQCPMPNQRRVYISYLDSVHYFRPREFRTSIYHEILIAYLDYVKQRG
FHTAHIWACPPFKGDDYILHCHPPDQKVPREDRLRKWYWIMLETAKEKGV
VHSITTLYEENFVDPNNDATVLPYMEGDYWIGEVENLIKEIEDEEKEEAE
EAAGGGADSKKRRGQMKKKKKSSKSKRSVRQKLDDGSGMEINRDPVMERL
GEIINQMKESFIVANLYPPEYARACADRLKRESEEARQKKPCPPPPPMLE
AGPEMKEGVKEGVKEEISSSLPPSGGDGVGNGGEKKEGGGEGPKEGEAGK
KKGDASQEEISQEEGRGEEGEGEGRATAACPSAMEVEGANGEGKEKEKEK
EKEEKKEEGKEGEKKEEEVEKEGTAEASVTGFAAVASEGKEGGEERKTGA
APDVGSTAGTTTAASTSPSSSSSSASSSSSSEGGGGGGKVSSSFVPPEVV
EGKDETIDPDPNEECEIFDTRSEFLDFCKGEEEGGREGRNHYQFDVLRRA
KHSSMMCIYHLINPDAPKFLPACVACGKDITSPFKWTCAQSCEDDFSICQ
DCYTQGGWRRHPHPLTRVLIRGKAATEAGGDSDMLRHKEMLRRHLELLVH
SCTCQKPDCVSNCLKMRELLKHVHECPIKSQGGCKKCRRVWLLLQYHAKN
CKNKECHVPKCAQIREALRMRMLQQLAMEDRRRAAQNSTIGYRVQPKKEE
EDEG*
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Synonyms
Publications