jgi.p|Nanoce1779_2|667632, gene_1771 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|667632
Unique Namegene_1771
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:1471086..1475931 +

Link to JBrowse

Properties
Property NameValue
TranscriptId667718
ProteinId667632
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:1471086..1475931 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005388calcium-transporting ATPase activity
GO:0005524ATP binding
GO:0015662ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G05580NO03G05580Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667632mRNA_1771-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667632mRNA_1771Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|667632

>mRNA_1771-protein ID=mRNA_1771-protein|Name=jgi.p|Nanoce1779_2|667632|organism=Nannochloropsis oceanica|type=polypeptide|length=1205bp
MTFMSSTTAFLLAWSSTGVAARAGEGEEGRDDSHGALPPLSLDDAIDALQ
VDVAHGLYSTVARERLYQCGPNEVSPPNAPSYLHIFLDELYEGPQLLLMA
VGVAYALLGSMEEACTALVVVLLMINAEIVTEFRAKRAMARLQSTVPKIA
AVLRDEGQEMEIPAVTVVPGDIVILRAGQAVPADILILSASSLEIDEAAI
TGESIPNHKKAGARGGEGGGGREGRNEEVDGGVPRAGSFTPPALSVVVMG
GPSQEEEEEERRRGGGKAGGGENVLISEQKAYGGTMVTRGKGLGLVTRIG
RHTYLGSLLLKSRRLAPPRSPLQIHLRALAARLTVFALLASCFAAFIGAA
RSSSSNRSNVGGPSTSWKTTLLTALSLCFALIPEELPLLMVGVLAVGALT
LSRRGIYVKSLAAQEALAYVDVVLADKTGTLTENRLSLAEITLPSAMAGV
EEEEEEEAEEQAVGEGEGGGGSPGEKEGRRRRRREKKMLREEGDLEALLV
SWAYTSSTNSLPPSSDGGPGTLSEREGGKEGDGMPATPMVPDIPDVFDRA
VLLSYILWTEEEFRPSLSAEVKSHLRRMIPPLLQHKASHASLLAEDPFDP
SRKVSARAYRVRKGEREENGRGVDNRGGGGGGGGGGGGMVRNLLQYVGVR
GGGGKGEGGGEGKVKVFFRGAPDVLLDECEYVWVRGQPRRLGREERHQLA
ELLDTLCGEGLRVLGFAATTTAAAAVGAAGKGGDTSLTSSLLPSAAITGF
LAFEDPVRASVAEAIHTCHDAGIRVVMLTGDHQLTACSIARQSVEEGGVG
SEAGTEAGTEGGREEHFVVVCPDTPGWQADAKLLENGAVFCRASPDEKLA
LLRALQREGGREGGRGARHVVAVTGDGANDALSLAAADVGLAMGRYVGGK
GWKEKRSVDQAKAAAGIVVAHEEFPALLHTLREGRRLFANFRKALAFYLG
AKSALLLLFLLAPLPLSPLQIILLELFMDVGASTTFTLEPADGDLMLIPP
RHPSLPFFDDELLQATLAGGLSLLLVVLLSGGASDGHGGREGGRMDALEY
RQSLYFYGWLLGHIFLALHLRSFHQPLVVKGVFSNPAFLVWAGAVLLLVV
LLALFPPLGQVLGLVGLTRREWFRLTSLALVGTGWMEGWKLRRWYGPGGS
HAKETAILMRRRRGREESEENHQVVVVREGAARIVAAAKAGGPSMVTEKD
RLLG*
back to top
Synonyms
Publications