jgi.p|Nanoce1779_2|625443, mRNA_4226 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|625443
Unique Name	mRNA_4226
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4776
Alignment location	scaffold_10:55551..61397 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	625529
Track	FilteredModels2
ProteinId	625443

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_10	supercontig	scaffold_10:55551..61397 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|625443	gene_4226	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|625443	mRNA_4226-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_4226	CDS_4226	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_10:55551..61397-
coding sequence from alignment at scaffold_10:55551..61397-

mRNA sequence

>mRNA_4226 ID=mRNA_4226|Name=jgi.p|Nanoce1779_2|625443|organism=Nannochloropsis oceanica|type=mRNA|length=4776bp
CCCCAATTCCGAGTTCCTGAAGGTGAGGAAAGAGCAGGAAGGAGGGAGGG
AAGGAGGGAGGGAACAAGGGTCAGCAATCATGGGAAAGGGAAGGACGGAG
TCAAGGGGAAATGACCAACGGGGAGAAGAGGGACAAGAGAAGGGGAAAAG
AGGATGAGGGTGCGTTTGAACTCATGGGGCCTTCCTGTCGTGCTTTCTTC
ACCTTTCATCCCTCCTTCCGTCCATCCCACAGTTCAAGGAGGAGTACAAG
TTGGAGGACATGAGTCCTGCCGATTGGTGGTCTAAGATCGACGAAATCGC
CAAGGACAACGCCGCGAAGGGCGTTAACCTCCCCGAGATGACTTTGGACC
TAACCAAGGACGACTTTTTGGGTGTGGCCCGCGAGGAATTCGTGAAGTCC
ATTAAGCAGTTCCTCAAGGTGGAGTCCGAGCTCTACCCTGTATTTATCAT
CTCCAAGCCCGGCTGTGAGGAGGGTGCCAAGCTAGTGAACGCCTTCAACA
AGACCATGGACATCCCTGTGCGCACGTACGAGGTATTTGGTTTCGATGCC
TTCAACTTCAAGGTCAAGGCTGACTACGATTGGGGCGAGGCACGGCTGGA
GGCGATTGAGGAGCTGACCGGCAGCAAGGAGTTGCCGTTGGTGTACGTGG
GTGGTAAGCTGATCGGCGGCGCCGAGAAAGTTAATGCTCAAATTGCAGAC
GGCAGCCTGAAGAAGACTGTGGCGACCTTGCGACAGGCCATCGTGGACAT
GGTGGAGGCTCGCTTTCCCAAGCAAGAGGAGGAGAGCATGTATATTGGCA
TGCGTAAGGTGACAGCAGCGGAATATAAGGCCTATGAGGCGTTTCAGGCC
AAGACAGGCGGATTGGACCCCTTGGAGGTGAACCGGAAGAAGGCCAAGGA
GGCGGCGCAGAATAAGTAGGGGCTTGGGTTAGTTCTGGTTGGGAGGAGGG
GGAAAAGAGGGAAGGAGGGAGAAGGGAGTGTAGGGCGGGACAGTGGTGAT
GGGGGAGGGAGTATGTGTGCGTGTTTTTTATAAACGCCTAAGTGTCTCGT
GGTACATTTTAAAGGAGGGAAGGAAGGTAGATTGATTGGGAGGGAGGGAT
AAAAGCGCCTGAGCGCTGTGTCGTTTGAGATAAGATGGGATGGCGAAAGA
CAAAAGAAGAGAAAGAAGAAGAGAAGGAGGGAAAAGAGCTACCCGGTGGA
GAAGGGTCGACGCTTTATTAGGGTTATGTCTCTTTCTTTCATGTTTTCAC
CTCCTCATGTGCCTGTCTATGTGCATGTGTGTCTGTGTTGTGCGTGCGTG
CACTCCTACGTGTGCGATGTGCCTACGTGTGGGGGGGGTTCGTGTGCACG
GGGGTAGTGTGTAGGTGTACTACTACTGCTACTGCTATTCGCTTATGATA
TCGGTGCGAGGGCTCAACTCACATTTCTGTGTGACCACCAAACCCAACCA
TCCCCCCCTTTCCTCCTTCCCTTGTTCCTCCTCACTGTTCTCTCTCCCTT
GGACACAGAAGTAGATGTGCCCAGGCAGGGGTGGCAGTAGCAGCAGCAGC
AGCAGCAGCGACGAAGAGATAAGGAAATAAAAACCAGGAGGGAAAACAGG
AACGCCACCCTCTAGTTGCCATCAATCCCCTGAAACTTTTTTCTTTCCAT
TTTCCCTTTCTGTCCCTTTGATTTAATACATCCCCACTTTAGGCATTTCC
CCCTCCCTCCCTTCCTACCTCCTTCCCTCCAATCTTCGTGACTTCACGCG
CCTCCCTTCCACGGGACTCCGTACGTCTCCTCACACACCACCTCGTCCAT
ATCAAACCTCAATGATGCCGGGGGCTGCTTCGATGACACTGCATGCCCCT
CCTTCCCTTCCTGTGCCGCTTCCTCGGCAGGCGTGGCGGCATAGCCCACA
CAAACCACCACCGGCACTATGTACCGGGAAGGCACCTTCAACAACCTCCT
CAACCGCCGGGCATCAAACCCCTCCATGGGGCACGTCGTCAGTCCATGCG
ATGATGCAGCCAACATAAAGGTCATGGCGGCAAGCATCGTATTCTTCGCT
GCCCAGGTCTCCGGTCGCTCGAAGCGTGGCACTGGTTTGAATGTCCCCAC
CACGTTCATAAACATTCTCTTTCCCCAGTACAAACACCATCGAACCAAAG
AAAATCGATACCCCGTCGAGAAAAGGGTCGCGAAAAAAGAAATTTGCTTG
AGAAAGCCTTCTGGGAAAGTGCCTGTTCGACGAAAGAGCTCTACGACACG
CGGCATGAGCCGCCCACTTTCCAAGTCGGCGGCAAAGATAACAGTGACAG
GGGCGTTACGCACCCGGTCACCGTTGGCGCCGAGCATGGCATGCGTGGCC
ACCTTGTCGCGAAGGGCGGGGTCTTGCAGGACGATGAGTTTGAACGGCTG
GGTATTGAAGGAGGAAGGAGAGCGTTGTGTCAGGCGGAGGAGGTCGTTGA
GGATGGTTCTTGACACGGACTTATGCGCGTAGTGAGAGTTGGAGTAACGG
TTCCGCACGACGTCGGAAAAGGGTGCGGCCAGAATGGAAGGTGGCGGTTG
ATTCCCTCCCAAACTAGCCGCCGCAGCAGCAGCAGCGTCGAGAACCACAG
GTGAAGGAGGATTGGAGGGGGAGGAGGCTCGTGATGATAATGCTGGGGGT
GATGGTGACCGCAGGACAAAACCCTCGGCCGTCGCAGGCAGCAGGGTCAG
GAGAAGGAATGGCAAAATGAGGAGGCGCATCATCTAGCGTAGTAATAGCT
GGACAGTCGCCTGTGGTGTGAGGTGTGAGGATTAGATGATCGAAGGGAGG
GGAGAAGCGATGGGGGAGGGATTTGTTCTTTTCGATGACGGAGGCTTGGC
TGCCGCGACGAGAGAAGCAGGGAGAGATGACACGAAACTCCCCCGCACAC
GCGCATTACATGTTGCGCCCTTGTCCACATAATAATGGAACACAGCACAG
CATGGCAGCAGTCTCCTCTTCAAGTCGCTTTATCGCCCCAAGCGATGAGG
GAGGCACCTAAAACCCATCTGCCTTCTTGATTCGATTCTACTGATGGCGC
AAGCATGCAATGACGACGACAACCACACGTTCTGGACGCTGTCGCCTCCA
ACCCATATATTGCCACGCTTTTCTTATCAATCGTACAACCTTTCTGCTGT
GCGCCTACCGCGTGCGCCCGCCACTCCTTTCCCTCGTCGCTCACATGTAT
TTCCCCGCTTCCCCGTCCCAGGCCACAGACCACTGCCACAAACCAAACAT
GCTTGCTGCTCGTACGGCTCTGCGTCCCGTTACTATGGCCGCTGCCCGCT
CCTTCTCCTCCACCAAGTCTACGGCCGCCAAGGTTGCTGTGGTGGGTGCG
TCGGGAGGCATTGGGCAGCCCTTATCCATGCTCCTAAAGCTGGACCCCAG
CATCAAGGAGCTCAACTTGTACGATATTGTGCACACCCCCGGTGTGGCCG
CGGATTTGTCCCACATCCCCTTCCCTGCGAAAGTCAAGGGATTCAAAGGT
GCGGAATCCGTCGAAGCCGCGCTGAAGGGATGCGATGTGATTGTTGTCCC
GGCCGGCGTGCCGCGAAAGCCTGGTATGACCCGTGACGACCTCTTCAACA
TCAATGCCGGCATTGTGAAAACAATTGCTGAGGCCGCCGCCAAGGTGGCG
CCCAATGCCTGCTATTTGATCATCTCTAACCCGGTCAATTCCACAGTGCC
CATCTTTGCGGAGGTGCTCAAGAAGGCGGGGACCTACAACCCCAAGAAAC
TCTTCGGAGTCACCACGCTGGACGTCATCCGCGCCAACACCTTCGTGTCC
GAGAATCAAGGCACGGATCCTACCTCCACCAACGTGACTGTCGTGGGCGG
TCACGCCGGGACGACCATCCTTCCCCTCTTGTCTCAAGTGAAGGGAGCCA
AGTTCTCCCCCGAGGCCCTGGCGGCACTGACCCACCGCATTCAGTTCGGA
GGGGACGAGGTGGTTAAGGCTAAGGATGGCGCCGGATCCGCGACCCTAAG
CATGGCATATGCTGGCTATTTGTTCACGGCCCAGTTGCTCAAGGCCCTCA
AGGGCGAGAAGGGTGTGGTGGCGTGCACTTTCGTGGAGAACACCGTGACG
GCCGCGCCCTTTTTCGCCGTGCCTGTGACGTTGGGGAAGGGGGGGGTGGA
GAAAATCCATAGTTTGGGTGAGCTCTCGGCCGTGGAGAAGGAGGCCATGG
ACAAGGCGATACCTGATTTGGTCGCGCAGGCCAAGAAGGGGGTGGAGTTC
GTGAAGAACGCTAAATAGAGGGGAGGGAGGGAGAGAAGGAGGAAGGGAGG
GAGGGAGAAAAGGAGGGACAGTTTTGATTATGCGAGTTGTTAGGTAGAGA
AATATGTATCCTAGGCTCAGCGGAGAGAGACGGAAAGGGAGAGGAGAAAA
CGGGCAAGAGAGCAAGGGAATGTAGTAGCACACAAGAGAGGGAAGGAGGG
AGGGAGGTAGGGAGGGAGGGAGTAGTCTCTCACAACAAACTAGAAAATAA
GAAGTGAAGCATAGGAAGGAAACGAGTCTCGATGAGTTTTTCAACACCGA
CAGCTGACGGTCTTAGATATCCGTTACTTATTGGGCGGCTTGCCCCCAAA
GAATCGCTCCCACTTCCGTCCTTTCTCCTTCGCTCCCTCCTCTCCAAACC
CCCTCCCTCCTCTCCCTTGGTCACCATCCTCTCCCATTCATGACAGCAAC
TCACTCAATTTCGGGTCCAGCGTTCGGCTTCCATTCGACGACGACGAAGA
AGTGTCGCCCCATAGACTACCTCCCC

protein sequence of jgi.p|Nanoce1779_2|625443

>mRNA_4226-protein ID=mRNA_4226-protein|Name=jgi.p|Nanoce1779_2|625443|organism=Nannochloropsis oceanica|type=polypeptide|length=403bp
MTTTTTRSGRCRLQPIYCHAFLINRTTFLLCAYRVRPPLLSLVAHMYFPA
SPSQATDHCHKPNMLAARTALRPVTMAAARSFSSTKSTAAKVAVVGASGG
IGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVKGFKGAES
VEAALKGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEAAAKVAPNA
CYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVSENQ
GTDPTSTNVTVVGGHAGTTILPLLSQVKGAKFSPEALAALTHRIQFGGDE
VVKAKDGAGSATLSMAYAGYLFTAQLLKALKGEKGVVACTFVENTVTAAP
FFAVPVTLGKGGVEKIHSLGELSAVEKEAMDKAIPDLVAQAKKGVEFVKN
AK*

mRNA from alignment at scaffold_10:55551..61397-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4226 ID=mRNA_4226|Name=jgi.p|Nanoce1779_2|625443|organism=Nannochloropsis oceanica|type=mRNA|length=5847bp|location=Sequence derived from alignment at scaffold_10:55551..61397- (Nannochloropsis oceanica)
CCCCAATTCCGAGTTCCTGAAGGTGAGGAAAGAGCAGGAAGGAGGGAGGG
AAGGAGGGAGGGAACAAGGGTCAGCAATCATGGGAAAGGGAAGGACGGAG
TCAAGGGGAAATGACCAACGGGGAGAAGAGGGACAAGAGAAGGGGAAAAG
AGGATGAGGGTGCGTTTGAACTCATGGGGCCTTCCTGTCGTGCTTTCTTC
ACCTTTCATCCCTCCTTCCGTCCATCCCACAGTTCAAGGAGGAGTACAAG
TTGGAGGACATGAGTCCTGCCGATTGGTGGTCTAAGATCGACGAAATCGC
CAAGGACAACGCCGCGAAGGGCGTTAACCTCCCCGAGGTACGTCCTCTCC
CTCCCTCCCTCTTTTCCCTCTTCCCCCCATCCTTCTTTTGCCGTTTTTCC
CACCCTTTAGCTTCCTACCGTTGCTGACCACGCCCTTCCCTCCTTCTCTC
TCTCCCTCCCTCCCCCCCCTCTTTCCCCTTAGATGACTTTGGACCTAACC
AAGGACGACTTTTTGGGTGTGGCCCGCGAGGAATTCGTGAAGTCCATTAA
GCAGTTCCTCAAGGTTTGTCCTTACCCCTGCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCGGTACGTCCATGGTCTGTGTCTCTAAAAA
CTGACGCCCAACCCTGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CGCTCCTCACCAGGTGGAGTCCGAGCTCTACCCTGTATTTATCATCTCCA
AGCCCGGCTGTGAGGAGGGTGCCAAGCTAGTGAACGTGAGTCGGGCCGAG
GGAGGGAGGGAGGGAGGGAAGAGCATGTCTCATGACCGGCGAGTTCCAGC
AGAGAGGAGGGTGCTTACCAAAATAACGTCTCGTTTCCCTCCCTCCCTCC
CTCAGGCCTTCAACAAGACCATGGACATCCCTGTGCGCACGTACGAGGTA
TTTGGTTTCGATGCCTTCAACTTCAAGGTCAAGGCTGACTACGATTGGGG
CGAGGCACGGCTGGAGGCGATTGAGGAGCTGACCGGCAGCAAGGTCAGGA
AGGAGGGAGGGAGGGAAGGGGGGGGTGAGAGTGGGAGGGTGGGAAGGGGA
ATGGATAATCACTTTGGTGTAAGCCACAACGGACGGGATTGAACGAGTCG
ACAGGCGACATCATGGATAAGCCCCTCAAAAAAGCAAGCCCATCTGACAC
GCCCTCCTTCCCCCCCCCCCCTCCCTCCCTCCCTCCTTCTCGCCTCACAG
GAGTTGCCGTTGGTGTACGTGGGTGGTAAGCTGATCGGCGGCGCCGAGAA
AGTTAATGCTCAAATTGCAGACGGCAGCCTGAAGAAGACTGTGGCGACCT
TGCGACAGGTAGACAGGGTGGGAAGGAGGGGGGGGGATGACCTCACAATA
AAGAGGGATTTGGGTTGAATGAGAGGGGGATCTCTCTCTCCCAGCCAATG
TGGGGATATAATTACAAATTCTTTCATATTGGTTTCTTTAATGCACTCAT
GCTCGTGTCTATGTCGTGGTGGACACGGCTAGGTTCTATCTTTCAACTTA
AGGGAGAAAAGACCTTGTGCAATTGAAGCACACACACAAGCAGCAGCTGC
TTACCCCCTCCTCCCTTCCCCCCGTTCTTCGCGCCTTTTTCTCCTTCACA
GGCCATCGTGGACATGGTGGAGGCTCGCTTTCCCAAGCAAGAGGAGGAGA
GCATGTATATTGGCATGCGTAAGGTGACAGCAGCGGAATATAAGGCCTAT
GAGGCGTTTCAGGCCAAGACAGGCGGATTGGACCCCTTGGAGGTGAACCG
GAAGAAGGCCAAGGAGGCGGCGCAGAATAAGTAGGGGCTTGGGTTAGTTC
TGGTTGGGAGGAGGGGGAAAAGAGGGAAGGAGGGAGAAGGGAGTGTAGGG
CGGGACAGTGGTGATGGGGGAGGGAGTATGTGTGCGTGTTTTTTATAAAC
GCCTAAGTGTCTCGTGGTACATTTTAAAGGAGGGAAGGAAGGTAGATTGA
TTGGGAGGGAGGGATAAAAGCGCCTGAGCGCTGTGTCGTTTGAGATAAGA
TGGGATGGCGAAAGACAAAAGAAGAGAAAGAAGAAGAGAAGGAGGGAAAA
GAGCTACCCGGTGGAGAAGGGTCGACGCTTTATTAGGGTTATGTCTCTTT
CTTTCATGTTTTCACCTCCTCATGTGCCTGTCTATGTGCATGTGTGTCTG
TGTTGTGCGTGCGTGCACTCCTACGTGTGCGATGTGCCTACGTGTGGGGG
GGGTTCGTGTGCACGGGGGTAGTGTGTAGGTGTACTACTACTGCTACTGC
TATTCGCTTATGATATCGGTGCGAGGGCTCAACTCACATTTCTGTGTGAC
CACCAAACCCAACCATCCCCCCCTTTCCTCCTTCCCTTGTTCCTCCTCAC
TGTTCTCTCTCCCTTGGACACAGAAGTAGATGTGCCCAGGCAGGGGTGGC
AGTAGCAGCAGCAGCAGCAGCAGCGACGAAGAGATAAGGAAATAAAAACC
AGGAGGGAAAACAGGAACGCCACCCTCTAGTTGCCATCAATCCCCTGAAA
CTTTTTTCTTTCCATTTTCCCTTTCTGTCCCTTTGATTTAATACATCCCC
ACTTTAGGCATTTCCCCCTCCCTCCCTTCCTACCTCCTTCCCTCCAATCT
TCGTGACTTCACGCGCCTCCCTTCCACGGGACTCCGTACGTCTCCTCACA
CACCACCTCGTCCATATCAAACCTCAATGATGCCGGGGGCTGCTTCGATG
ACACTGCATGCCCCTCCTTCCCTTCCTGTGCCGCTTCCTCGGCAGGCGTG
GCGGCATAGCCCACACAAACCACCACCGGCACTATGTACCGGGAAGGCAC
CTTCAACAACCTCCTCAACCGCCGGGCATCAAACCCCTCCATGGGGCACG
TCGTCAGTCCATGCGATGATGCAGCCAACATAAAGGTCATGGCGGCAAGC
ATCGTATTCTTCGCTGCCCAGGTCTCCGGTCGCTCGAAGCGTGGCACTGG
TTTGAATGTCCCCACCACGTTCATAAACATTCTCTTTCCCCAGTACAAAC
ACCATCGAACCAAAGAAAATCGATACCCCGTCGAGAAAAGGGTCGCGAAA
AAAGAAATTTGCTTGAGAAAGCCTTCTGGGAAAGTGCCTGTTCGACGAAA
GAGCTCTACGACACGCGGCATGAGCCGCCCACTTTCCAAGTCGGCGGCAA
AGATAACAGTGACAGGGGCGTTACGCACCCGGTCACCGTTGGCGCCGAGC
ATGGCATGCGTGGCCACCTTGTCGCGAAGGGCGGGGTCTTGCAGGACGAT
GAGTTTGAACGGCTGGGTATTGAAGGAGGAAGGAGAGCGTTGTGTCAGGC
GGAGGAGGTCGTTGAGGATGGTTCTTGACACGGACTTATGCGCGTAGTGA
GAGTTGGAGTAACGGTTCCGCACGACGTCGGAAAAGGGTGCGGCCAGAAT
GGAAGGTGGCGGTTGATTCCCTCCCAAACTAGCCGCCGCAGCAGCAGCAG
CGTCGAGAACCACAGGTGAAGGAGGATTGGAGGGGGAGGAGGCTCGTGAT
GATAATGCTGGGGGTGATGGTGACCGCAGGACAAAACCCTCGGCCGTCGC
AGGCAGCAGGGTCAGGAGAAGGAATGGCAAAATGAGGAGGCGCATCATCT
AGCGTAGTAATAGCTGGACAGTCGCCTGTGGTGTGAGGTGTGAGGATTAG
ATGATCGAAGGGAGGGGAGAAGCGATGGGGGAGGGATTTGTTCTTTTCGA
TGACGGAGGCTTGGCTGCCGCGACGAGAGAAGCAGGGAGAGATGACACGA
AACTCCCCCGCACACGCGCATTACATGTTGCGCCCTTGTCCACATAATAA
TGGAACACAGCACAGCATGGCAGCAGTCTCCTCTTCAAGTCGCTTTATCG
CCCCAAGCGATGAGGGAGGCACCTAAAACCCATCTGCCTTCTTGATTCGA
TTCTACTGATGGCGCAAGCATGCAATGACGACGACAACCACACGTTCTGG
ACGCTGTCGCCTCCAACCCATATATTGCCACGCTTTTCTTATCAATCGTA
CAACCTTTCTGCTGTGCGCCTACCGCGTGCGCCCGCCACTCCTTTCCCTC
GTCGCTCACATGTATTTCCCCGCTTCCCCGTCCCAGGCCACAGACCACTG
CCACAAACCAAACATGCTTGCTGCTCGTACGGCTCTGCGTCCCGTTACTA
TGGCCGCTGCCCGCTCCTTCTCCTCCACCAAGTCTACGGCCGCCAAGGTT
GCTGTGGTGGGTGCGTCGGGAGGCATTGGGCAGCCCTTATCCATGCTCCT
AAAGCTGGACCCCAGCATCAAGGAGCTCAACTTGTACGATATTGTGCACA
CCCCCGGTGTGGCCGCGGATTTGTCCCACATCCCCTTCCCTGCGAAAGTC
AAGGGATTCAAAGGTGCGGAATCCGTCGAAGCCGCGCTGAAGGGATGCGA
TGTGATTGTTGTCCCGGCCGGCGTGCCGCGAAAGCCTGGTATGACCCGTG
ACGACCTCTTCAACATCAATGCCGGCATTGTGAAAACAATTGCTGAGGCC
GCCGCCAAGGTGGCGCCCAATGCCTGCTATTTGATCATCTCTAACCCGGT
CAATTCCACAGTGCCCATCTTTGCGGAGGTGCTCAAGAAGGTGGGTATAG
GTGGGAGTCAATCATGGCTGCAGGCATCCTTGCTCCCTCCCTTCCTGACA
CTTCTCACTCCTTCCTGATGCAATCCATCTTGTCATGTGTTACATTCACC
TCCTTTCTTTCTCTTCTACCTCCTTTCTTCCTTTCCTCCGTGCCAGGCGG
GGACCTACAACCCCAAGAAACTCTTCGGAGTCACCACGCTGGACGTCATC
CGCGCCAACACCTTCGTGTCCGAGAATCAAGGCACGGATCCTACCTCCAC
CAACGTGACTGTCGTGGGCGGTCACGCCGGGACGACCATCCTTCCCCTCT
TGTCTCAAGTGAAGGGAGCCAAGTTCTCCCCCGAGGCCCTGGCGGCACTG
ACCCACCGCATTCAGTTCGGAGGGGACGAGGTGGTTAAGGCTAAGGATGG
CGCCGGATCCGCGACCCTAAGCATGGCATATGCTGGCTATTTGTTCACGG
CCCAGTTGCTCAAGGCCCTCAAGGGCGAGAAGGGTGTGGTGGCGTGCACT
TTCGTGGAGAACACCGTGACGGCCGCGCCCTTTTTCGCCGTGCCTGTGAC
GTTGGGGAAGGGGGGGGTGGAGAAAATCCATAGTTTGGGTGAGCTCTCGG
CCGTGGAGAAGGAGGCCATGGACAAGGCGATACCTGATTTGGTCGCGCAG
GCCAAGAAGGGGGTGGAGTTCGTGAAGAACGCTAAATAGAGGGGAGGGAG
GGAGAGAAGGAGGAAGGGAGGGAGGGAGAAAAGGAGGGACAGTTTTGATT
ATGCGAGTTGTTAGGTAGAGAAATATGTATCCTAGGCTCAGCGGAGAGAG
ACGGAAAGGGAGAGGAGAAAACGGGCAAGAGAGCAAGGGAATGTAGTAGC
ACACAAGAGAGGGAAGGAGGGAGGGAGGTAGGGAGGGAGGGAGTAGTCTC
TCACAACAAACTAGAAAATAAGAAGTGAAGCATAGGAAGGAAACGAGTCT
CGATGAGTTTTTCAACACCGACAGCTGACGGTCTTAGATATCCGTTACTT
ATTGGGCGGCTTGCCCCCAAAGAATCGCTCCCACTTCCGTCCTTTCTCCT
TCGCTCCCTCCTCTCCAAACCCCCTCCCTCCTCTCCCTTGGTCACCATCC
TCTCCCATTCATGACAGCAACTCACTCAATTTCGGGTCCAGCGTTCGGCT
TCCATTCGACGACGACGAAGAAGTGTCGCCCCATAGACTACCTCCCC

Coding sequence (CDS) from alignment at scaffold_10:55551..61397-

>mRNA_4226 ID=mRNA_4226|Name=jgi.p|Nanoce1779_2|625443|organism=Nannochloropsis oceanica|type=CDS|length=2418bp|location=Sequence derived from alignment at scaffold_10:55551..61397- (Nannochloropsis oceanica)
GCGGGGACCTACAACCCCAAGAAACTCTTCGGAGTCACCACGCTGGACGT
CATCCGCGCCAACACCTTCGTGTCCGAGAATCAAGGCACGGATCCTACCT
CCACCAACGTGACTGTCGTGGGCGGTCACGCCGGGACGACCATCCTTCCC
CTCTTGTCTCAAGTGAAGGGAGCCAAGTTCTCCCCCGAGGCCCTGGCGGC
ACTGACCCACCGCATTCAGTTCGGAGGGGACGAGGTGGTTAAGGCTAAGG
ATGGCGCCGGATCCGCGACCCTAAGCATGGCATATGCTGGCTATTTGTTC
ACGGCCCAGTTGCTCAAGGCCCTCAAGGGCGAGAAGGGTGTGGTGGCGTG
CACTTTCGTGGAGAACACCGTGACGGCCGCGCCCTTTTTCGCCGTGCCTG
TGACGTTGGGGAAGGGGGGGGTGGAGAAAATCCATAGTTTGGGTGAGCTC
TCGGCCGTGGAGAAGGAGGCCATGGACAAGGCGATACCTGATTTGGTCGC
GCAGGCCAAGAAGGGGGTGGAGTTCGTGAAGAACGCTAAATAGATGACGA
CGACAACCACACGTTCTGGACGCTGTCGCCTCCAACCCATATATTGCCAC
GCTTTTCTTATCAATCGTACAACCTTTCTGCTGTGCGCCTACCGCGTGCG
CCCGCCACTCCTTTCCCTCGTCGCTCACATGTATTTCCCCGCTTCCCCGT
CCCAGGCCACAGACCACTGCCACAAACCAAACATGCTTGCTGCTCGTACG
GCTCTGCGTCCCGTTACTATGGCCGCTGCCCGCTCCTTCTCCTCCACCAA
GTCTACGGCCGCCAAGGTTGCTGTGGTGGGTGCGTCGGGAGGCATTGGGC
AGCCCTTATCCATGCTCCTAAAGCTGGACCCCAGCATCAAGGAGCTCAAC
TTGTACGATATTGTGCACACCCCCGGTGTGGCCGCGGATTTGTCCCACAT
CCCCTTCCCTGCGAAAGTCAAGGGATTCAAAGGTGCGGAATCCGTCGAAG
CCGCGCTGAAGGGATGCGATGTGATTGTTGTCCCGGCCGGCGTGCCGCGA
AAGCCTGGTATGACCCGTGACGACCTCTTCAACATCAATGCCGGCATTGT
GAAAACAATTGCTGAGGCCGCCGCCAAGGTGGCGCCCAATGCCTGCTATT
TGATCATCTCTAACCCGGTCAATTCCACAGTGCCCATCTTTGCGGAGGTG
CTCAAGAAGGCGGGGACCTACAACCCCAAGAAACTCTTCGGAGTCACCAC
GCTGGACGTCATCCGCGCCAACACCTTCGTGTCCGAGAATCAAGGCACGG
ATCCTACCTCCACCAACGTGACTGTCGTGGGCGGTCACGCCGGGACGACC
ATCCTTCCCCTCTTGTCTCAAGTGAAGGGAGCCAAGTTCTCCCCCGAGGC
CCTGGCGGCACTGACCCACCGCATTCAGTTCGGAGGGGACGAGGTGGTTA
AGGCTAAGGATGGCGCCGGATCCGCGACCCTAAGCATGGCATATGCTGGC
TATTTGTTCACGGCCCAGTTGCTCAAGGCCCTCAAGGGCGAGAAGGGTGT
GGTGGCGTGCACTTTCGTGGAGAACACCGTGACGGCCGCGCCCTTTTTCG
CCGTGCCTGTGACGTTGGGGAAGGGGGGGGTGGAGAAAATCCATAGTTTG
GGTGAGCTCTCGGCCGTGGAGAAGGAGGCCATGGACAAGGCGATACCTGA
TTTGGTCGCGCAGGCCAAGAAGGGGGTGGAGTTCGTGAAGAACGCTAAAT
AGATGACGACGACAACCACACGTTCTGGACGCTGTCGCCTCCAACCCATA
TATTGCCACGCTTTTCTTATCAATCGTACAACCTTTCTGCTGTGCGCCTA
CCGCGTGCGCCCGCCACTCCTTTCCCTCGTCGCTCACATGTATTTCCCCG
CTTCCCCGTCCCAGGCCACAGACCACTGCCACAAACCAAACATGCTTGCT
GCTCGTACGGCTCTGCGTCCCGTTACTATGGCCGCTGCCCGCTCCTTCTC
CTCCACCAAGTCTACGGCCGCCAAGGTTGCTGTGGTGGGTGCGTCGGGAG
GCATTGGGCAGCCCTTATCCATGCTCCTAAAGCTGGACCCCAGCATCAAG
GAGCTCAACTTGTACGATATTGTGCACACCCCCGGTGTGGCCGCGGATTT
GTCCCACATCCCCTTCCCTGCGAAAGTCAAGGGATTCAAAGGTGCGGAAT
CCGTCGAAGCCGCGCTGAAGGGATGCGATGTGATTGTTGTCCCGGCCGGC
GTGCCGCGAAAGCCTGGTATGACCCGTGACGACCTCTTCAACATCAATGC
CGGCATTGTGAAAACAATTGCTGAGGCCGCCGCCAAGGTGGCGCCCAATG
CCTGCTATTTGATCATCTCTAACCCGGTCAATTCCACAGTGCCCATCTTT
GCGGAGGTGCTCAAGAAG

Synonyms

Publications