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Properties
Property Name | Value |
TranscriptId | 590260 |
Track | FilteredModels2 |
ProteinId | 590174 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_11 | supercontig | scaffold_11:453354..454618 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5738 ID=mRNA_5738|Name=jgi.p|Nanoce1779_2|590174|organism=Nannochloropsis oceanica|type=mRNA|length=1265bp GGGGCGGTGGGGATGGGCGGGAACGAGGCGGCCGCGGCCATGGACCCAAA ACAGAGCTATGAGCAGTTGCTGGAGGCCTTCTTGGGTCTTGACTTTGGGG ATGCCTCGTATGTGCGGGAGGTAGTAGAGGCCAACTATGAGCGATGCACC ATGGAGTTCTTGGACCTGCTGGGCGAGCGCCTGGCAGATGCCTCCACGCC TTCCGACATGCTCTCCCGCCTGACGGCTCTTAAGGGCCACATCGAGTATA TTCTGCAGGAGCGCATGTCCCGAGCGGCGGAGCGTTTGCAAAACATCGTC AAGGCCGGGGCCGTGGACGCCATGCTCGAGAAGATTTACGAGCTGAACGA CCGGGGCGAAATTGATGAGCCCTTTATCTTGCTACTCGAGACGAATGTGC AGCAGGCGGAGCGAGCTGGGGCAGCTCCTGCGGCGGAATTATTTCGCAAA CTCGTGGCCACGGCCCGGGAAGCGATCGACGAGAAGCTGACTCCGTCCAC GCGGTTGGTCCGACGCTTGCTGCGGGTGACCGACTCGGAGAAGCGCAAGG AGGTGTTGCACGACGCCTTTCGACCCAAGGCCACCTCCTTGACGGCAGAG GGGGCTAAAACCGAGGCTATGCCGGACGTGCCCCCGCCCGATTTCATCGA GGAGCTCCGGCAGCTCATCAAGAACTTTGGGAACATCGAGGCCAACGACT TTGGGGCCATGCTGCGGGCCCTGGTGGAGGAGGCGGAAGAGGTCTCCACC ACTATCTATGGCAAGGCCATGACCCATCGCGAGCAACAGGACTACATGTG GCAGAAGGGCTCCGTCTCGGTCTTTGACCTTGAGGCCTTGGAAGGCAAGG CGCAGGCAACAGGTGAGCAAATGCCATGGCAAAATGATGCCTATGACTCC ATGATGCCCCCAGGTTTTGAGAACGGCGTCCGCACCATTGGCGGCAACGA CAAGAGCAAATTTTGACATGTCAATGACGGGTGCAGATGAAAGGGAATGT GATGGATAGTTGATAATGATTGATTACATGTGATTTTAAAACCGAGGTAG GCGATGGAGAGAAGGCACGGTGTGCATGGCGGATGATGTGTTTTTGTTTA TGTGAGGCAGAAAGCCAGATGCCTGCACAAAAAAAGCAAACAAACAAAAA TGCATACACAGCGCAATCGTGGTTTTCGTTCGCCATCTCATGCTTTCCTC TGACTTAGGAGATCGAAGCGCTGAAACGAGCGACACGCATCGTGACGCAC CACGTTCAAAGTGAC back to topprotein sequence of jgi.p|Nanoce1779_2|590174 >mRNA_5738-protein ID=mRNA_5738-protein|Name=jgi.p|Nanoce1779_2|590174|organism=Nannochloropsis oceanica|type=polypeptide|length=318bp MGGNEAAAAMDPKQSYEQLLEAFLGLDFGDASYVREVVEANYERCTMEFL DLLGERLADASTPSDMLSRLTALKGHIEYILQERMSRAAERLQNIVKAGA VDAMLEKIYELNDRGEIDEPFILLLETNVQQAERAGAAPAAELFRKLVAT AREAIDEKLTPSTRLVRRLLRVTDSEKRKEVLHDAFRPKATSLTAEGAKT EAMPDVPPPDFIEELRQLIKNFGNIEANDFGAMLRALVEEAEEVSTTIYG KAMTHREQQDYMWQKGSVSVFDLEALEGKAQATGEQMPWQNDAYDSMMPP GFENGVRTIGGNDKSKF* back to topmRNA from alignment at scaffold_11:453354..454618+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5738 ID=mRNA_5738|Name=jgi.p|Nanoce1779_2|590174|organism=Nannochloropsis oceanica|type=mRNA|length=1265bp|location=Sequence derived from alignment at scaffold_11:453354..454618+ (Nannochloropsis oceanica) GGGGCGGTGGGGATGGGCGGGAACGAGGCGGCCGCGGCCATGGACCCAAA
ACAGAGCTATGAGCAGTTGCTGGAGGCCTTCTTGGGTCTTGACTTTGGGG
ATGCCTCGTATGTGCGGGAGGTAGTAGAGGCCAACTATGAGCGATGCACC
ATGGAGTTCTTGGACCTGCTGGGCGAGCGCCTGGCAGATGCCTCCACGCC
TTCCGACATGCTCTCCCGCCTGACGGCTCTTAAGGGCCACATCGAGTATA
TTCTGCAGGAGCGCATGTCCCGAGCGGCGGAGCGTTTGCAAAACATCGTC
AAGGCCGGGGCCGTGGACGCCATGCTCGAGAAGATTTACGAGCTGAACGA
CCGGGGCGAAATTGATGAGCCCTTTATCTTGCTACTCGAGACGAATGTGC
AGCAGGCGGAGCGAGCTGGGGCAGCTCCTGCGGCGGAATTATTTCGCAAA
CTCGTGGCCACGGCCCGGGAAGCGATCGACGAGAAGCTGACTCCGTCCAC
GCGGTTGGTCCGACGCTTGCTGCGGGTGACCGACTCGGAGAAGCGCAAGG
AGGTGTTGCACGACGCCTTTCGACCCAAGGCCACCTCCTTGACGGCAGAG
GGGGCTAAAACCGAGGCTATGCCGGACGTGCCCCCGCCCGATTTCATCGA
GGAGCTCCGGCAGCTCATCAAGAACTTTGGGAACATCGAGGCCAACGACT
TTGGGGCCATGCTGCGGGCCCTGGTGGAGGAGGCGGAAGAGGTCTCCACC
ACTATCTATGGCAAGGCCATGACCCATCGCGAGCAACAGGACTACATGTG
GCAGAAGGGCTCCGTCTCGGTCTTTGACCTTGAGGCCTTGGAAGGCAAGG
CGCAGGCAACAGGTGAGCAAATGCCATGGCAAAATGATGCCTATGACTCC
ATGATGCCCCCAGGTTTTGAGAACGGCGTCCGCACCATTGGCGGCAACGA
CAAGAGCAAATTTTGACATGTCAATGACGGGTGCAGATGAAAGGGAATGT
GATGGATAGTTGATAATGATTGATTACATGTGATTTTAAAACCGAGGTAG
GCGATGGAGAGAAGGCACGGTGTGCATGGCGGATGATGTGTTTTTGTTTA
TGTGAGGCAGAAAGCCAGATGCCTGCACAAAAAAAGCAAACAAACAAAAA
TGCATACACAGCGCAATCGTGGTTTTCGTTCGCCATCTCATGCTTTCCTC
TGACTTAGGAGATCGAAGCGCTGAAACGAGCGACACGCATCGTGACGCAC
CACGTTCAAAGTGAC back to topCoding sequence (CDS) from alignment at scaffold_11:453354..454618+ >mRNA_5738 ID=mRNA_5738|Name=jgi.p|Nanoce1779_2|590174|organism=Nannochloropsis oceanica|type=CDS|length=954bp|location=Sequence derived from alignment at scaffold_11:453354..454618+ (Nannochloropsis oceanica) ATGGGCGGGAACGAGGCGGCCGCGGCCATGGACCCAAAACAGAGCTATGA GCAGTTGCTGGAGGCCTTCTTGGGTCTTGACTTTGGGGATGCCTCGTATG TGCGGGAGGTAGTAGAGGCCAACTATGAGCGATGCACCATGGAGTTCTTG GACCTGCTGGGCGAGCGCCTGGCAGATGCCTCCACGCCTTCCGACATGCT CTCCCGCCTGACGGCTCTTAAGGGCCACATCGAGTATATTCTGCAGGAGC GCATGTCCCGAGCGGCGGAGCGTTTGCAAAACATCGTCAAGGCCGGGGCC GTGGACGCCATGCTCGAGAAGATTTACGAGCTGAACGACCGGGGCGAAAT TGATGAGCCCTTTATCTTGCTACTCGAGACGAATGTGCAGCAGGCGGAGC GAGCTGGGGCAGCTCCTGCGGCGGAATTATTTCGCAAACTCGTGGCCACG GCCCGGGAAGCGATCGACGAGAAGCTGACTCCGTCCACGCGGTTGGTCCG ACGCTTGCTGCGGGTGACCGACTCGGAGAAGCGCAAGGAGGTGTTGCACG ACGCCTTTCGACCCAAGGCCACCTCCTTGACGGCAGAGGGGGCTAAAACC GAGGCTATGCCGGACGTGCCCCCGCCCGATTTCATCGAGGAGCTCCGGCA GCTCATCAAGAACTTTGGGAACATCGAGGCCAACGACTTTGGGGCCATGC TGCGGGCCCTGGTGGAGGAGGCGGAAGAGGTCTCCACCACTATCTATGGC AAGGCCATGACCCATCGCGAGCAACAGGACTACATGTGGCAGAAGGGCTC CGTCTCGGTCTTTGACCTTGAGGCCTTGGAAGGCAAGGCGCAGGCAACAG GTGAGCAAATGCCATGGCAAAATGATGCCTATGACTCCATGATGCCCCCA GGTTTTGAGAACGGCGTCCGCACCATTGGCGGCAACGACAAGAGCAAATT TTGA back to top
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