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Properties
| Property Name | Value |
|---|
| TranscriptId | 106356 |
| Track | FilteredModels2 |
| ProteinId | 106270 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:513900..516346 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7193 ID=mRNA_7193|Name=jgi.p|Nanoce1779_2|106270|organism=Nannochloropsis oceanica|type=mRNA|length=934bp
TTTATTTATTTATTATTTATTATTTATTATTTATTTATTTTGGGGGTCTT
CCCTCCCCATCACTTACCTTCTTCATCCCTCGTTTTCTCACGGTCGTGGA
AACTTTGTCTCCCTCGTTCCCTCCCTCCGTTTTTATTCTTTTACTTGCCT
GAGTAAGACGTCGGACCACAGTATCTATGACACCACTCATTCTCCCTCCC
TCCTTCCCTCCTCCTCCTCACCTTCCTCCCAGATGAACCTCCTCGATCGT
GGAGTCAAGATGGCGGCTGAGGCTGACGAGGACCCGGACATGAACTTTGT
CCGTAAGCACGCCCTGGCCCAGGCAGAGGAACTCGGCGTCTCGGTCCGCG
ATGCAGCCACCCGCGTCTTCTCCAACGCCGCCGGCTCTTACTCGGCAAAC
GTCGGGCTTACTATCGAGAATGGGGGCTGGGACGGAGAGGCCCAACTCCA
AGAACAATTCGTCAGCCGCAAAGGCTTTGCCTTCAATGCGGACAAGCCGG
GTATGATGGATGCCCGCACCAAACTGCTCAACCCCAAGTTCTACGAAGGC
ATGCTTGCAACCGGCTACGAGGGCGCGCGTGAGATCACGAAGCGATTGCG
CAACACTATGGGCTGGTCGGCCACGGCCGGGGAGGTGGACAATTTCATCT
ACGAGGACGCCAACGACGTCTTCATCAAGGACGAGTCCATGCGAGATCGA
CTCCTGGAGACCAATCCCAACGCCCTGCGGGACATGGTGACGACGTTTTT
GGAGGCCAACGGGCGCGGGTACTGGGACACCAGCGAGGAGAATCTCGACA
TTCTTCGTGAACTCTACGAGGAGGTGGAGGATCGCATCGAAGGGCTCGCG
TAAGGAGGAGGGAACCTCCCCCCGTCCCTCCCTTACATGTCTAGATGTGT
CTTTACGTATGTCTTCATGTGCGTGTGTGCGGCC back to topprotein sequence of jgi.p|Nanoce1779_2|106270 >mRNA_7193-protein ID=mRNA_7193-protein|Name=jgi.p|Nanoce1779_2|106270|organism=Nannochloropsis oceanica|type=polypeptide|length=207bp
MNLLDRGVKMAAEADEDPDMNFVRKHALAQAEELGVSVRDAATRVFSNAA
GSYSANVGLTIENGGWDGEAQLQEQFVSRKGFAFNADKPGMMDARTKLLN
PKFYEGMLATGYEGAREITKRLRNTMGWSATAGEVDNFIYEDANDVFIKD
ESMRDRLLETNPNALRDMVTTFLEANGRGYWDTSEENLDILRELYEEVED
RIEGLA* back to topmRNA from alignment at scaffold_16:513900..516346- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7193 ID=mRNA_7193|Name=jgi.p|Nanoce1779_2|106270|organism=Nannochloropsis oceanica|type=mRNA|length=2447bp|location=Sequence derived from alignment at scaffold_16:513900..516346- (Nannochloropsis oceanica)
TTTATTTATTTATTATTTATTATTTATTATTTATTTATTTTGGGGGTCTT
CCCTCCCCATCACTTACCTTCTTCATCCCTCGTTTTCTCACGGTCGTGGA
AACTTTGTCTCCCTCGTTCCCTCCCTCCGTTTTTATTCTTTTACTTGCCT
GAGTAAGACGTCGGACCACAGTATCTATGACACCACTCATTCTCCCTCCC
TCCTTCCCTCCTCCTCCTCACCTTCCTCCCAGATGAACCTCCTCGATCGT
GGAGTCAAGATGGCGGCTGAGGCTGACGAGGACCCGGACATGAACTTTGT
CCGTAAGCACGCCCTGGCCCAGGCAGAGGTGAGGAGGAAGGAGGGAGGGA
GGAAGGGCCCGAGTGTTCCGGGTATTTTTTCTCCTCAAACCAAACCAAGC
TCACCCTTCTCCCCTCTTTCCGTCCCTCCCTCCTTCCTTCCTCATCAGGA
ACTCGGCGTCTCGGTCCGCGATGCAGCCACCCGCGTCTTCTCCAACGCCG
CCGGCTCTTACTCGGCAAACGTCGGGCTTACTATCGAGAATGGGGGCTGG
GACGGAGAGGCCCAACTCCAAGAACAATTCGTCAGCCGCAAAGTGCGTAT
CTTCCCTCCCTTTCTTCCTCCTTCCCGCTTGGCCTTCCCCCGCATTGTTG
CACCAGTCGTGACACTGTATTGGCCCCCTTTTTCTGTCAGACGGAACCTC
AATCAAACCCCCCTCTCAACTCCCCTCCCTCCCTCGCCTCCTCAGGGCTT
TGCCTTCAATGCGGACAAGCCGGGTATGATGGAGCAACGCACAGACGCCT
TCCGCAGCGCCCTCAAGAGCGTGGACGTTACTTTTCAAAATTTGGACTCG
TCGGAGATTTCCCTAACTGACGTCAGCCACTATTACGACAGGTGCGCCTT
TCGTAACTCCGTCCGTCCCTCCCTTTCTCTTCTCATGTTTCCATCCGCCT
CACACACTCGTCACCTCCCCAACACTTCTCCCCCTTCTCTGACTCCCGCT
CTCCCTCCCTCCCTCCCGCCCGCCCTCCCTCCCTCCCTCCCTCCCAGCGA
CCCGACCAAGGTAGTGCAGTCCCTGCGTGACGACAAGAAGAAGCCCATGT
CCTTCATCGCCGACACCACCACGGCCAACGCCCAGGTATGGAGGGAGTAA
GGGAGGAAAGATAGGAAGGAGGGCCGACAGGAAGGAGGGCAGACAAGAGA
TGATGATGGACAACTACTAGGAGGAGAGTTGAGCTTCTGTCGCTTTCGTG
ATCTTTTTCAATGCTCACCCCTTCCTCCCTCCCTCCCTCCTTCCTTCCCT
CCCTCTCCAGGTCCGTTCCCTGTCTGAGACTGTCCGTCTGGATGCCCGCA
CCAAACTGCTCAACCCCAAGTTCTACGAAGGTACGACAAACACCTCCCTC
TCTCCTTCCCTCACTCCTTCCGCCTTTTCTGTCCTCTCTCCCCTCCCTCC
CTCCCTTCCTTTATTTCTCGTCGCTCACCCCTTGCATTCCCTCCCTCCCT
CCCTCCCAGGCATGCTTGCAACCGGCTACGAGGGCGCGCGTGAGATCACG
AAGCGATTGCGCAACACTATGGGCTGGTAAGTGCCCCCAGAAGGGAGGGA
AGGAGGGAAGCGAAGACACGTGGAAACCAACAACCATAGCTCCATAAGTT
TGATAGGGGGATAAATACAAATAGATAATTCTTTTTGCATCTGCATGTCT
AGGTCACATCTAGGTGGAGCCATTCCCGACTCAATTTCATCCCTCCCTCC
CTCCCGCTCACCCTCTTCCAGGTCGGCCACGGCCGGGGAGGTGGACAATT
TCATCTACGAGGACGCCAACGACGTCTTCATCAAGGACGAGTCCATGCGA
GATCGACTCCTGGAGACCAATCCCAACGCCCTGCGGGACATGGTGACGAC
GTTTTTGGAGGTGAGGGGGAGGGGAAGGGAGGAAGGACAGCAAGGGGCCC
ATACCCTTGTCGGTTACTGTGTCGTGATTTTGAGTTATGTTCGATCGGTG
GGACGGGCTGTTTCATTCTCTTTCTCTCCCCTTCCCGCCCTCCTTCCCTC
CCTCCCTTGCTCTTGTGGGCAGCCTGTTGTTTATTATTATTATTATTATT
ATTATTATTATTTATTTATTATTATTATTTCTTGTCATCCTCCTGTTCTC
TCTCCGTTCCTCCTTTCCTCCCTCTCTCTCCTTCCCTCCCCCAAGCCGCC
AGCCGTTATCGCCACTAGAGCTAGTCATCAGTCTCATCCCTCCTCCCTCC
CTCCCTCCCTCCCTCAGGCCAACGGGCGCGGGTACTGGGACACCAGCGAG
GAGAATCTCGACATTCTTCGTGAACTCTACGAGGAGGTGGAGGATCGCAT
CGAAGGGCTCGCGTAAGGAGGAGGGAACCTCCCCCCGTCCCTCCCTTACA
TGTCTAGATGTGTCTTTACGTATGTCTTCATGTGCGTGTGTGCGGCC back to topCoding sequence (CDS) from alignment at scaffold_16:513900..516346- >mRNA_7193 ID=mRNA_7193|Name=jgi.p|Nanoce1779_2|106270|organism=Nannochloropsis oceanica|type=CDS|length=4347bp|location=Sequence derived from alignment at scaffold_16:513900..516346- (Nannochloropsis oceanica)
GCCAACGGGCGCGGGTACTGGGACACCAGCGAGGAGAATCTCGACATTCT
TCGTGAACTCTACGAGGAGGTGGAGGATCGCATCGAAGGGCTCGCGTAAG
TCGGCCACGGCCGGGGAGGTGGACAATTTCATCTACGAGGACGCCAACGA
CGTCTTCATCAAGGACGAGTCCATGCGAGATCGACTCCTGGAGACCAATC
CCAACGCCCTGCGGGACATGGTGACGACGTTTTTGGAGGCATGCTTGCAA
CCGGCTACGAGGGCGCGCGTGAGATCACGAAGCGATTGCGCAACACTATG
GGCTGTGCCCGCACCAAACTGCTCAACCCCAAGTTCTACGAAGGGCTTTG
CCTTCAATGCGGACAAGCCGGGTATGATGGAGAACTCGGCGTCTCGGTCC
GCGATGCAGCCACCCGCGTCTTCTCCAACGCCGCCGGCTCTTACTCGGCA
AACGTCGGGCTTACTATCGAGAATGGGGGCTGGGACGGAGAGGCCCAACT
CCAAGAACAATTCGTCAGCCGCAAAATGAACCTCCTCGATCGTGGAGTCA
AGATGGCGGCTGAGGCTGACGAGGACCCGGACATGAACTTTGTCCGTAAG
CACGCCCTGGCCCAGGCAGAGGCCAACGGGCGCGGGTACTGGGACACCAG
CGAGGAGAATCTCGACATTCTTCGTGAACTCTACGAGGAGGTGGAGGATC
GCATCGAAGGGCTCGCGTAAGTCGGCCACGGCCGGGGAGGTGGACAATTT
CATCTACGAGGACGCCAACGACGTCTTCATCAAGGACGAGTCCATGCGAG
ATCGACTCCTGGAGACCAATCCCAACGCCCTGCGGGACATGGTGACGACG
TTTTTGGAGGCATGCTTGCAACCGGCTACGAGGGCGCGCGTGAGATCACG
AAGCGATTGCGCAACACTATGGGCTGTGCCCGCACCAAACTGCTCAACCC
CAAGTTCTACGAAGGGCTTTGCCTTCAATGCGGACAAGCCGGGTATGATG
GAGAACTCGGCGTCTCGGTCCGCGATGCAGCCACCCGCGTCTTCTCCAAC
GCCGCCGGCTCTTACTCGGCAAACGTCGGGCTTACTATCGAGAATGGGGG
CTGGGACGGAGAGGCCCAACTCCAAGAACAATTCGTCAGCCGCAAAATGA
ACCTCCTCGATCGTGGAGTCAAGATGGCGGCTGAGGCTGACGAGGACCCG
GACATGAACTTTGTCCGTAAGCACGCCCTGGCCCAGGCAGAGGCCAACGG
GCGCGGGTACTGGGACACCAGCGAGGAGAATCTCGACATTCTTCGTGAAC
TCTACGAGGAGGTGGAGGATCGCATCGAAGGGCTCGCGTAAGTCGGCCAC
GGCCGGGGAGGTGGACAATTTCATCTACGAGGACGCCAACGACGTCTTCA
TCAAGGACGAGTCCATGCGAGATCGACTCCTGGAGACCAATCCCAACGCC
CTGCGGGACATGGTGACGACGTTTTTGGAGGCATGCTTGCAACCGGCTAC
GAGGGCGCGCGTGAGATCACGAAGCGATTGCGCAACACTATGGGCTGTGC
CCGCACCAAACTGCTCAACCCCAAGTTCTACGAAGGGCTTTGCCTTCAAT
GCGGACAAGCCGGGTATGATGGAGAACTCGGCGTCTCGGTCCGCGATGCA
GCCACCCGCGTCTTCTCCAACGCCGCCGGCTCTTACTCGGCAAACGTCGG
GCTTACTATCGAGAATGGGGGCTGGGACGGAGAGGCCCAACTCCAAGAAC
AATTCGTCAGCCGCAAAATGAACCTCCTCGATCGTGGAGTCAAGATGGCG
GCTGAGGCTGACGAGGACCCGGACATGAACTTTGTCCGTAAGCACGCCCT
GGCCCAGGCAGAGGCCAACGGGCGCGGGTACTGGGACACCAGCGAGGAGA
ATCTCGACATTCTTCGTGAACTCTACGAGGAGGTGGAGGATCGCATCGAA
GGGCTCGCGTAAGTCGGCCACGGCCGGGGAGGTGGACAATTTCATCTACG
AGGACGCCAACGACGTCTTCATCAAGGACGAGTCCATGCGAGATCGACTC
CTGGAGACCAATCCCAACGCCCTGCGGGACATGGTGACGACGTTTTTGGA
GGCATGCTTGCAACCGGCTACGAGGGCGCGCGTGAGATCACGAAGCGATT
GCGCAACACTATGGGCTGTGCCCGCACCAAACTGCTCAACCCCAAGTTCT
ACGAAGGGCTTTGCCTTCAATGCGGACAAGCCGGGTATGATGGAGAACTC
GGCGTCTCGGTCCGCGATGCAGCCACCCGCGTCTTCTCCAACGCCGCCGG
CTCTTACTCGGCAAACGTCGGGCTTACTATCGAGAATGGGGGCTGGGACG
GAGAGGCCCAACTCCAAGAACAATTCGTCAGCCGCAAAATGAACCTCCTC
GATCGTGGAGTCAAGATGGCGGCTGAGGCTGACGAGGACCCGGACATGAA
CTTTGTCCGTAAGCACGCCCTGGCCCAGGCAGAGGCCAACGGGCGCGGGT
ACTGGGACACCAGCGAGGAGAATCTCGACATTCTTCGTGAACTCTACGAG
GAGGTGGAGGATCGCATCGAAGGGCTCGCGTAAGTCGGCCACGGCCGGGG
AGGTGGACAATTTCATCTACGAGGACGCCAACGACGTCTTCATCAAGGAC
GAGTCCATGCGAGATCGACTCCTGGAGACCAATCCCAACGCCCTGCGGGA
CATGGTGACGACGTTTTTGGAGGCATGCTTGCAACCGGCTACGAGGGCGC
GCGTGAGATCACGAAGCGATTGCGCAACACTATGGGCTGTGCCCGCACCA
AACTGCTCAACCCCAAGTTCTACGAAGGGCTTTGCCTTCAATGCGGACAA
GCCGGGTATGATGGAGAACTCGGCGTCTCGGTCCGCGATGCAGCCACCCG
CGTCTTCTCCAACGCCGCCGGCTCTTACTCGGCAAACGTCGGGCTTACTA
TCGAGAATGGGGGCTGGGACGGAGAGGCCCAACTCCAAGAACAATTCGTC
AGCCGCAAAATGAACCTCCTCGATCGTGGAGTCAAGATGGCGGCTGAGGC
TGACGAGGACCCGGACATGAACTTTGTCCGTAAGCACGCCCTGGCCCAGG
CAGAGGCCAACGGGCGCGGGTACTGGGACACCAGCGAGGAGAATCTCGAC
ATTCTTCGTGAACTCTACGAGGAGGTGGAGGATCGCATCGAAGGGCTCGC
GTAAGTCGGCCACGGCCGGGGAGGTGGACAATTTCATCTACGAGGACGCC
AACGACGTCTTCATCAAGGACGAGTCCATGCGAGATCGACTCCTGGAGAC
CAATCCCAACGCCCTGCGGGACATGGTGACGACGTTTTTGGAGGCATGCT
TGCAACCGGCTACGAGGGCGCGCGTGAGATCACGAAGCGATTGCGCAACA
CTATGGGCTGTGCCCGCACCAAACTGCTCAACCCCAAGTTCTACGAAGGG
CTTTGCCTTCAATGCGGACAAGCCGGGTATGATGGAGAACTCGGCGTCTC
GGTCCGCGATGCAGCCACCCGCGTCTTCTCCAACGCCGCCGGCTCTTACT
CGGCAAACGTCGGGCTTACTATCGAGAATGGGGGCTGGGACGGAGAGGCC
CAACTCCAAGAACAATTCGTCAGCCGCAAAATGAACCTCCTCGATCGTGG
AGTCAAGATGGCGGCTGAGGCTGACGAGGACCCGGACATGAACTTTGTCC
GTAAGCACGCCCTGGCCCAGGCAGAGGCCAACGGGCGCGGGTACTGGGAC
ACCAGCGAGGAGAATCTCGACATTCTTCGTGAACTCTACGAGGAGGTGGA
GGATCGCATCGAAGGGCTCGCGTAAGTCGGCCACGGCCGGGGAGGTGGAC
AATTTCATCTACGAGGACGCCAACGACGTCTTCATCAAGGACGAGTCCAT
GCGAGATCGACTCCTGGAGACCAATCCCAACGCCCTGCGGGACATGGTGA
CGACGTTTTTGGAGGCATGCTTGCAACCGGCTACGAGGGCGCGCGTGAGA
TCACGAAGCGATTGCGCAACACTATGGGCTGTGCCCGCACCAAACTGCTC
AACCCCAAGTTCTACGAAGGGCTTTGCCTTCAATGCGGACAAGCCGGGTA
TGATGGAGAACTCGGCGTCTCGGTCCGCGATGCAGCCACCCGCGTCTTCT
CCAACGCCGCCGGCTCTTACTCGGCAAACGTCGGGCTTACTATCGAGAAT
GGGGGCTGGGACGGAGAGGCCCAACTCCAAGAACAATTCGTCAGCCGCAA
AATGAACCTCCTCGATCGTGGAGTCAAGATGGCGGCTGAGGCTGACGAGG
ACCCGGACATGAACTTTGTCCGTAAGCACGCCCTGGCCCAGGCAGAG back to top
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