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Properties
Property Name | Value |
TranscriptId | 560161 |
Track | FilteredModels2 |
ProteinId | 560075 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_30 | supercontig | scaffold_30:218543..220322 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9018 ID=mRNA_9018|Name=jgi.p|Nanoce1779_2|560075|organism=Nannochloropsis oceanica|type=mRNA|length=1431bp CCCCTTTTCACTTACCACCATCCACGACAGAGACACACGCGCGCACAAAC ACACACAAACATACACATATATATATACATATATATACGTAGAGGAGCAT CTGGAGCACTGCGAAACAGACAACAGCACGACTGCACTTGTCCCTGCAGC CTTGGGCCGGTCTTCTGCTCACCTTGCATAAAGCAACGCACAGCAACCCA GCCACCTCGCATCCATCCGCCGCGTAGTGTCTTAGCTACGCTTCCCCCCT CCCTCCTTCACATCGACACAGATATTAAAGGCGCTGCATCCCCAAATTGC GGGTGTCCTTCTCCTTCCTATTCTCCCCCTGGTGTACTTACTTAGCTCCA GAGAGTGGTGCGTACGGCACCGCCGCCGCTCTCACGGGGTCGCCGCGTAG GAGGAAGAAGGCGACAGACAGAGCAAGACATACCGAAAGAGCAGCACATA TACACACGGCATCATGAACTCTTCATCAGAGTCACGCAACCCACAAGGTG CAGGGGGGAGAGAAGCCGGCGGAGCAGGGGTTGGGGATGTAGGAAAAGAC AAGAGGCCGCTTTCGGCCCGTCTTGGCATTCGCCTCGCCTTGGACCCGGA GGAAGGGAGGGAGGAAGGGCAGGGGGGTAGTTGTCGAACGGGTAGTCCGT TGCGGGAGGAGGATGATGGAGGGGGGAAAGTGACCAGTTGCAGCAGTAGC AGGAGAACGACGACAAGTACTAGGGGACACGGAAGCAACAGCAGTAGCAG CAGCACCAGCAGTGGTAGTGGTGGTAGTAGGGCGGAGAGGGAGGAGAAGG TAGAGACGCCAGTGACAAGGAGAGCTTTGGAGGCGTCGAGGAAGGTGGTC TCGAAGTTGAAGGCGTCAGGGATCAACTTGCTGGCGTTGGATTTTGATAT GACGGTATTAGATATCCATACCGGCGGACAGTGGGCAGGAAAAGCCTCGG AGCTCTGTTCGCACATCCGCCCCTTTTTTTCATCCCTCATCCTCGAAGCC GGTCGGGAGGGCATTCACATGGCTGTCGTCACGTTTTCACCCCAGACGGG CATGATCCGCGAGGTACTCAAGGAGAAGTTTGGCGAGCCCCTTGCGTCGC TGATTCCCGTGCGAGGGGCGGACGGCTCCTGGGTTTACTCGGGCAAAGGA TCTCAAAAAGGGAAACAAGGGCACATGGCCAGCGCCGTCGAAGAACTGTG CGCCCGTTGTCCTTCCCTAGTCATCACCAGGGGAAGCACCGTCTTGATTG ATGACGATCGATCGAACATCGACGTGGCCCTCAAGGCGGGTGTGCGTGCT TTCTGGCTCGACCCCTGCCGGCCCGAGGAGGTGGTAGAGAGCCTGTTGGG AGGGATGGGAATGTCCTCCCTCCCTCCTTCCCTCCCTCCCTCATTTTCGG AGGAGGGAGAGGGTTAGGTGGGGAGTGAGGG back to topprotein sequence of jgi.p|Nanoce1779_2|560075 >mRNA_9018-protein ID=mRNA_9018-protein|Name=jgi.p|Nanoce1779_2|560075|organism=Nannochloropsis oceanica|type=polypeptide|length=318bp MNSSSESRNPQGAGGREAGGAGVGDVGKDKRPLSARLGIRLALDPEEGRE EGQGGSCRTGSPLREEDDGGGKVTSCSSSRRTTTSTRGHGSNSSSSSTSS GSGGSRAEREEKVETPVTRRALEASRKVVSKLKASGINLLALDFDMTVLD IHTGGQWAGKASELCSHIRPFFSSLILEAGREGIHMAVVTFSPQTGMIRE VLKEKFGEPLASLIPVRGADGSWVYSGKGSQKGKQGHMASAVEELCARCP SLVITRGSTVLIDDDRSNIDVALKAGVRAFWLDPCRPEEVVESLLGGMGM SSLPPSLPPSFSEEGEG* back to topmRNA from alignment at scaffold_30:218543..220322- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9018 ID=mRNA_9018|Name=jgi.p|Nanoce1779_2|560075|organism=Nannochloropsis oceanica|type=mRNA|length=1780bp|location=Sequence derived from alignment at scaffold_30:218543..220322- (Nannochloropsis oceanica) CCCCTTTTCACTTACCACCATCCACGACAGAGACACACGCGCGCACAAAC
ACACACAAACATACACATATATATATACATATATATACGTAGAGGAGCAT
CTGGAGCACTGCGAAACAGACAACAGCACGACTGCACTTGTCCCTGCAGC
CTTGGGCCGGTCTTCTGCTCACCTTGCATAAAGCAACGCACAGCAACCCA
GCCACCTCGCATCCATCCGCCGCGTAGTGTCTTAGCTACGCTTCCCCCCT
CCCTCCTTCACATCGACACAGATATTAAAGGCGCTGCATCCCCAAATTGC
GGGTGTCCTTCTCCTTCCTATTCTCCCCCTGGTGTACTTACTTAGCTCCA
GAGAGTGGTGCGTACGGCACCGCCGCCGCTCTCACGGGGTCGCCGCGTAG
GAGGAAGAAGGCGACAGACAGAGCAAGACATACCGAAAGAGCAGCACATA
TACACACGGCATCATGAACTCTTCATCAGAGTCACGCAACCCACAAGGTG
CAGGGGGGAGAGAAGCCGGCGGAGCAGGGGTTGGGGATGTAGGAAAAGAC
AAGAGGCCGCTTTCGGCCCGTCTTGGCATTCGCCTCGCCTTGGACCCGGA
GGAAGGGAGGGAGGAAGGGCAGGGGGGTAGTTGTCGAACGGGTAGTCCGT
TGCGGGAGGAGGATGATGGAGGGGGGAAAGTGACCAGTTGCAGCAGTAGC
AGGAGAACGACGACAAGTACTAGGGGACACGGAAGCAACAGCAGTAGCAG
CAGCACCAGCAGTGGTAGTGGTGGTAGTAGGGCGGAGAGGGAGGAGAAGG
TAGAGACGCCAGTGACAAGGAGAGCTTTGGAGGCGTCGAGGAAGGTGGTC
TCGAAGTTGAAGGCGTCAGGGATCAACTTGCTGGCGTTGGATTTTGATAT
GACGGTATTAGATATCCATACCGGTAAGTGTTGTATTATTTGTATTCGTT
TTCTCAATAAGTTGTGTATATATACATATGTATAAAGGTATACTCTTTCT
TTGGCTCAGTAATGCATGGGTTCTTTTTTTGTGTTGACGCGCATTACAGC
CCTCTAGTTTCATCTAAATTACCATACACGCGGACTCATCCCTTCTACCA
CCACCACCACTGATGATCATCACAATTAACAGGCGGACAGTGGGCAGGAA
AAGCCTCGGAGCTCTGTTCGCACATCCGCCCCTTTTTTTCATCCCTCATC
CTCGAAGCCGGTCGGGAGGGCATTCACATGGCTGTCGTCACGTTTTCACC
CCAGACGGGCATGATCCGCGAGGTACTCAAGGAGAAGTTTGGTACGTCCC
CTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCCCTGCG
CTGAAGACACCCAAACGTGTGAATCAAACTGCAAATAATCGAACCCTATT
TCAAACTCCCCACCCCCCACCACACACACAGGCGAGCCCCTTGCGTCGCT
GATTCCCGTGCGAGGGGCGGACGGCTCCTGGGTTTACTCGGGCAAAGGAT
CTCAAAAAGGGAAACAAGGGCACATGGCCAGCGCCGTCGAAGAACTGTGC
GCCCGTTGTCCTTCCCTAGTCATCACCAGGGGAAGCACCGTCTTGATTGA
TGACGATCGATCGAACATCGACGTGGCCCTCAAGGCGGGTGTGCGTGCTT
TCTGGCTCGACCCCTGCCGGCCCGAGGAGGTGGTAGAGAGCCTGTTGGGA
GGGATGGGAATGTCCTCCCTCCCTCCTTCCCTCCCTCCCTCATTTTCGGA
GGAGGGAGAGGGTTAGGTGGGGAGTGAGGG back to topCoding sequence (CDS) from alignment at scaffold_30:218543..220322- >mRNA_9018 ID=mRNA_9018|Name=jgi.p|Nanoce1779_2|560075|organism=Nannochloropsis oceanica|type=CDS|length=2862bp|location=Sequence derived from alignment at scaffold_30:218543..220322- (Nannochloropsis oceanica) GCGAGCCCCTTGCGTCGCTGATTCCCGTGCGAGGGGCGGACGGCTCCTGG GTTTACTCGGGCAAAGGATCTCAAAAAGGGAAACAAGGGCACATGGCCAG CGCCGTCGAAGAACTGTGCGCCCGTTGTCCTTCCCTAGTCATCACCAGGG GAAGCACCGTCTTGATTGATGACGATCGATCGAACATCGACGTGGCCCTC AAGGCGGGTGTGCGTGCTTTCTGGCTCGACCCCTGCCGGCCCGAGGAGGT GGTAGAGAGCCTGTTGGGAGGGATGGGAATGTCCTCCCTCCCTCCTTCCC TCCCTCCCTCATTTTCGGAGGAGGGAGAGGGTTAGGCGGACAGTGGGCAG GAAAAGCCTCGGAGCTCTGTTCGCACATCCGCCCCTTTTTTTCATCCCTC ATCCTCGAAGCCGGTCGGGAGGGCATTCACATGGCTGTCGTCACGTTTTC ACCCCAGACGGGCATGATCCGCGAGGTACTCAAGGAGAAGTTTGATGAAC TCTTCATCAGAGTCACGCAACCCACAAGGTGCAGGGGGGAGAGAAGCCGG CGGAGCAGGGGTTGGGGATGTAGGAAAAGACAAGAGGCCGCTTTCGGCCC GTCTTGGCATTCGCCTCGCCTTGGACCCGGAGGAAGGGAGGGAGGAAGGG CAGGGGGGTAGTTGTCGAACGGGTAGTCCGTTGCGGGAGGAGGATGATGG AGGGGGGAAAGTGACCAGTTGCAGCAGTAGCAGGAGAACGACGACAAGTA CTAGGGGACACGGAAGCAACAGCAGTAGCAGCAGCACCAGCAGTGGTAGT GGTGGTAGTAGGGCGGAGAGGGAGGAGAAGGTAGAGACGCCAGTGACAAG GAGAGCTTTGGAGGCGTCGAGGAAGGTGGTCTCGAAGTTGAAGGCGTCAG GGATCAACTTGCTGGCGTTGGATTTTGATATGACGGTATTAGATATCCAT ACCGGCGAGCCCCTTGCGTCGCTGATTCCCGTGCGAGGGGCGGACGGCTC CTGGGTTTACTCGGGCAAAGGATCTCAAAAAGGGAAACAAGGGCACATGG CCAGCGCCGTCGAAGAACTGTGCGCCCGTTGTCCTTCCCTAGTCATCACC AGGGGAAGCACCGTCTTGATTGATGACGATCGATCGAACATCGACGTGGC CCTCAAGGCGGGTGTGCGTGCTTTCTGGCTCGACCCCTGCCGGCCCGAGG AGGTGGTAGAGAGCCTGTTGGGAGGGATGGGAATGTCCTCCCTCCCTCCT TCCCTCCCTCCCTCATTTTCGGAGGAGGGAGAGGGTTAGGCGGACAGTGG GCAGGAAAAGCCTCGGAGCTCTGTTCGCACATCCGCCCCTTTTTTTCATC CCTCATCCTCGAAGCCGGTCGGGAGGGCATTCACATGGCTGTCGTCACGT TTTCACCCCAGACGGGCATGATCCGCGAGGTACTCAAGGAGAAGTTTGAT GAACTCTTCATCAGAGTCACGCAACCCACAAGGTGCAGGGGGGAGAGAAG CCGGCGGAGCAGGGGTTGGGGATGTAGGAAAAGACAAGAGGCCGCTTTCG GCCCGTCTTGGCATTCGCCTCGCCTTGGACCCGGAGGAAGGGAGGGAGGA AGGGCAGGGGGGTAGTTGTCGAACGGGTAGTCCGTTGCGGGAGGAGGATG ATGGAGGGGGGAAAGTGACCAGTTGCAGCAGTAGCAGGAGAACGACGACA AGTACTAGGGGACACGGAAGCAACAGCAGTAGCAGCAGCACCAGCAGTGG TAGTGGTGGTAGTAGGGCGGAGAGGGAGGAGAAGGTAGAGACGCCAGTGA CAAGGAGAGCTTTGGAGGCGTCGAGGAAGGTGGTCTCGAAGTTGAAGGCG TCAGGGATCAACTTGCTGGCGTTGGATTTTGATATGACGGTATTAGATAT CCATACCGGCGAGCCCCTTGCGTCGCTGATTCCCGTGCGAGGGGCGGACG GCTCCTGGGTTTACTCGGGCAAAGGATCTCAAAAAGGGAAACAAGGGCAC ATGGCCAGCGCCGTCGAAGAACTGTGCGCCCGTTGTCCTTCCCTAGTCAT CACCAGGGGAAGCACCGTCTTGATTGATGACGATCGATCGAACATCGACG TGGCCCTCAAGGCGGGTGTGCGTGCTTTCTGGCTCGACCCCTGCCGGCCC GAGGAGGTGGTAGAGAGCCTGTTGGGAGGGATGGGAATGTCCTCCCTCCC TCCTTCCCTCCCTCCCTCATTTTCGGAGGAGGGAGAGGGTTAGGCGGACA GTGGGCAGGAAAAGCCTCGGAGCTCTGTTCGCACATCCGCCCCTTTTTTT CATCCCTCATCCTCGAAGCCGGTCGGGAGGGCATTCACATGGCTGTCGTC ACGTTTTCACCCCAGACGGGCATGATCCGCGAGGTACTCAAGGAGAAGTT TGATGAACTCTTCATCAGAGTCACGCAACCCACAAGGTGCAGGGGGGAGA GAAGCCGGCGGAGCAGGGGTTGGGGATGTAGGAAAAGACAAGAGGCCGCT TTCGGCCCGTCTTGGCATTCGCCTCGCCTTGGACCCGGAGGAAGGGAGGG AGGAAGGGCAGGGGGGTAGTTGTCGAACGGGTAGTCCGTTGCGGGAGGAG GATGATGGAGGGGGGAAAGTGACCAGTTGCAGCAGTAGCAGGAGAACGAC GACAAGTACTAGGGGACACGGAAGCAACAGCAGTAGCAGCAGCACCAGCA GTGGTAGTGGTGGTAGTAGGGCGGAGAGGGAGGAGAAGGTAGAGACGCCA GTGACAAGGAGAGCTTTGGAGGCGTCGAGGAAGGTGGTCTCGAAGTTGAA GGCGTCAGGGATCAACTTGCTGGCGTTGGATTTTGATATGACGGTATTAG ATATCCATACCG back to top
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