jgi.p|Nanoce1779_2|701, gene_1242 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|701
Unique Namegene_1242
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:67418..75385 -

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Properties
Property NameValue
TranscriptId787
ProteinId701
Product nameMetalloenzyme, LuxS/M16 peptidase-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:67418..75385 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008237metallopeptidase activity
GO:0003824catalytic activity
GO:0046872metal ion binding
GO:0004222metalloendopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00640NO03G00640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|701mRNA_1242-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|701mRNA_1242Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|701

>mRNA_1242-protein ID=mRNA_1242-protein|Name=jgi.p|Nanoce1779_2|701|organism=Nannochloropsis oceanica|type=polypeptide|length=982bp
MVRSEVVQEYGAKVTLYRHRKTQTEIMSVTVDDDNKVFGITFRTPPTDST
GLPHILEHSVLCGSRKFPVKEPFVDLLKGSLQTFLNAFTYPDRTCYHPVA
SQNTKDFYNLIHVYLDAVLHPRAVGDPLVLQQEGWHLELEDKKEPLTYKG
VVYNEMKGVYSSPDQIMNRETQRALFPDNAYAVDSGGDPLVIPDLSFDQF
QAFHRHYYHPSNSRVYFYGNDDPLARLDLLDGYLNEFEAQELDSQVTYQP
KKTEPWTLTKTFPATEVTKDKGMVALNWLVNDKALSMKDQLVLGILDHIL
MGSSAAFLYRRLIESGLGESVIGGGLDDTLLQNTFSVGLKGVKEEDFSKV
EQLVLEILQDCVKEGFPADAIAASVNSIEFSLREFNTGRFPRGLSFMLGA
MNHWIYDRDPLDGLRFEGPLEEIKADLAANKKIFEDAIDFYLLSNGHRAA
VRMVPDVSLEEKQQKEEEGRLAQIKAGMNDEALEKIIKDTAVLKAAQEAE
DSPEARASLPRLDLTDLDKVQKETPVEVAQERGVTILRHALPTNGILYAD
IGFDVSALSLDDLPLLPLFLRCLLETGTSTMDQTQLVRAIGTHTGGLRSS
SRISYKHPKGGVIDPTTDMTAHMFIRGKAVASKASELFSLIKDVLTDANL
GNQKRVLEMLKESKARYRSSVVGAGNSFASIRLSSRYSLPGLISEKSEGI
SYMLALDALIDQAENDWPALQTRLEKIRDLVVKKENLILNLTGDNKVLTD
VLSPVYRFLDGMPSTGDRKLVCQDWRTDNQLFPNKNEGFSVPTQVNYVIK
GGPLWQKGEKVPGSATVINNYLRNGYLWDNVRVMGGAYGGFCSFSRMSGL
FSFGSYRDPNLLQTLDIYDAAAAHLAKSSITEEDLTQAIIGSIGDLDSPM
APDQKGFSSLIEHLMEESPEDRQQWRDEVLSTSSKDFAEFADRLADLKTR
STTAVVGSKKALEDANAKLAADAKLDVIELL*
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Synonyms
Publications