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Properties
| Property Name | Value |
|---|
| TranscriptId | 589276 |
| Track | FilteredModels2 |
| ProteinId | 589190 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:646355..647582 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4457 ID=mRNA_4457|Name=jgi.p|Nanoce1779_2|589190|organism=Nannochloropsis oceanica|type=mRNA|length=1103bp
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGATCCGGCACAAGCTCC
CCAACCCTATGCTTTTTGCGAGCAAAGATTTTCAAGAGATCGGTTGACTG
TCTTGGACCTGGCTCATGTTTCCAATGCCGCATATATGGACGCACCCGAG
CTGCAGAATTACCTCGTCGAGAACGTGCCGAGGCATCGATTTAGCAATGT
GACATTGGTGGATTTGGGCCAGTATGGTCCGGTGACGTATTTGTTTGATT
TGCCGCATAGCAAGGTGTTGTTGTGGGGGATCAGGGGGACAAATGCCCTG
TTTGACTTATTTCAAGACTTGGATGCTTACAGTGAAGCAATCCTCATTCA
ATTGTGTACATCTTTATTCCCTTTGTATGCCAGTCCGATCTTTCAACCTC
TATTGAATAAATTCGTGGGCACGAGCTATCACCTGGTTGAAGCTCTGGCC
ACGCTCAAAGATGTCCTGTTGAACCGGCAGCAAGGCAGTCAGATGGAAAT
TACCAATAAGCGAAAAGAGGAAACGAGACCGGGGCAGGAGCAGGCGACGG
CTGGGAAACGGTATTATTACGATGCGTTAGCCGACTACATCAACCGCACC
ATCATCACAGACCCGTACTATCAAGGGTACGAACTCCTGTTCACGGGCCA
CAGTCTTGGTGGTGGAGTCGCTCAGATTGTTGCCTCCCGTTTGAAAGGCG
TTGCGGTCGTGTTTTCTGCGCCGGGCGTCGTACTCTCTCGGCGAAAGTTC
AAAGTTTCCCTTGAGGATGTGGATGCCTACAACGTGAACGTGTGGGCTCT
CGGAGATCTGGTACCTCTTATTGACCAACAAAGCATCAAGGCCCAGACAA
TAAGGTGTTCGCCCGAGCGTTTTAGCTATCATTGTCATTCCATTTTGCAC
ACCATAGATGAGATAGAGGGAAGCTGTGGAAATGGTGATGAGGGGAGGGA
GGGCGTGAGAGAGTGGGGCGGAGAAGGATGATGCAAATGCGTGAATCAAG
AAACGACAAGAGTGAGCTGTGTGTAAATATGTATAAACCAAGTAAATGAA
TGCCCGTGTATTGACGTACGCGTGCTAAGGAATTAACATGATGTGCTTTA
GAA back to topprotein sequence of jgi.p|Nanoce1779_2|589190 >mRNA_4457-protein ID=mRNA_4457-protein|Name=jgi.p|Nanoce1779_2|589190|organism=Nannochloropsis oceanica|type=polypeptide|length=282bp
MDAPELQNYLVENVPRHRFSNVTLVDLGQYGPVTYLFDLPHSKVLLWGIR
GTNALFDLFQDLDAYSEAILIQLCTSLFPLYASPIFQPLLNKFVGTSYHL
VEALATLKDVLLNRQQGSQMEITNKRKEETRPGQEQATAGKRYYYDALAD
YINRTIITDPYYQGYELLFTGHSLGGGVAQIVASRLKGVAVVFSAPGVVL
SRRKFKVSLEDVDAYNVNVWALGDLVPLIDQQSIKAQTIRCSPERFSYHC
HSILHTIDEIEGSCGNGDEGREGVREWGGEG* back to topmRNA from alignment at scaffold_10:646355..647582+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4457 ID=mRNA_4457|Name=jgi.p|Nanoce1779_2|589190|organism=Nannochloropsis oceanica|type=mRNA|length=1228bp|location=Sequence derived from alignment at scaffold_10:646355..647582+ (Nannochloropsis oceanica)
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGATCCGGCACAAGCTCC
CCAACCCTATGCTTTTTGCGAGCAAAGATTTTCAAGAGATCGGTTGACTG
TCTTGGACCTGGCTCATGTTTCCAATGCCGCATATATGGACGCACCCGAG
CTGCAGAATTACCTCGTCGAGAACGTGCCGAGGCATCGATTTAGCAATGT
GACATTGGTGGATTTGGGCCAGTATGGTCCGGTGACGTATTTGTTTGATT
TGCCGCATAGCAAGGTGTTGTTGTGGGGGATCAGGGGGACAAATGCCCTG
TTTGACTTATTTCAAGACTTGGATGCTTACAGTGAAGCAATCCTCATTCA
ATTGTGTACATCTTTATTCCCTTTGTATGCCAGTCCGATCTTTCAACCTC
TATTGAATAAATTCGTGGGCACGAGCTATCACCTGGTTGAAGCTCTGGCC
ACGCTCAAAGATGTCCTGTTGAACCGGCAGCAAGGCAGTCAGATGGAAAT
TACCAATAAGCGAAAAGAGGAAACGAGACCGGGGCAGGAGCAGGCGACGG
CTGGGAAACGGTATTATTACGATGCGTTAGGTGAGTCGATGCGGCATAAA
AATTGAGGGGGTGTAGCGTCTTGTTCCGTGTCTTAATTTATGTATCGCCT
ATCCATGTCCACCTTTAATTTCCGACCACATCTTCCCTCCTCTCTCCCCT
ACCAGCCGACTACATCAACCGCACCATCATCACAGACCCGTACTATCAAG
GGTACGAACTCCTGTTCACGGGCCACAGTCTTGGTGGTGGAGTCGCTCAG
ATTGTTGCCTCCCGTTTGAAAGGCGTTGCGGTCGTGTTTTCTGCGCCGGG
CGTCGTACTCTCTCGGCGAAAGTTCAAAGTTTCCCTTGAGGATGTGGATG
CCTACAACGTGAACGTGTGGGCTCTCGGAGATCTGGTACCTCTTATTGAC
CAACAAAGCATCAAGGCCCAGACAATAAGGTGTTCGCCCGAGCGTTTTAG
CTATCATTGTCATTCCATTTTGCACACCATAGATGAGATAGAGGGAAGCT
GTGGAAATGGTGATGAGGGGAGGGAGGGCGTGAGAGAGTGGGGCGGAGAA
GGATGATGCAAATGCGTGAATCAAGAAACGACAAGAGTGAGCTGTGTGTA
AATATGTATAAACCAAGTAAATGAATGCCCGTGTATTGACGTACGCGTGC
TAAGGAATTAACATGATGTGCTTTAGAA back to topCoding sequence (CDS) from alignment at scaffold_10:646355..647582+ >mRNA_4457 ID=mRNA_4457|Name=jgi.p|Nanoce1779_2|589190|organism=Nannochloropsis oceanica|type=CDS|length=1692bp|location=Sequence derived from alignment at scaffold_10:646355..647582+ (Nannochloropsis oceanica)
ATGGACGCACCCGAGCTGCAGAATTACCTCGTCGAGAACGTGCCGAGGCA
TCGATTTAGCAATGTGACATTGGTGGATTTGGGCCAGTATGGTCCGGTGA
CGTATTTGTTTGATTTGCCGCATAGCAAGGTGTTGTTGTGGGGGATCAGG
GGGACAAATGCCCTGTTTGACTTATTTCAAGACTTGGATGCTTACAGTGA
AGCAATCCTCATTCAATTGTGTACATCTTTATTCCCTTTGTATGCCAGTC
CGATCTTTCAACCTCTATTGAATAAATTCGTGGGCACGAGCTATCACCTG
GTTGAAGCTCTGGCCACGCTCAAAGATGTCCTGTTGAACCGGCAGCAAGG
CAGTCAGATGGAAATTACCAATAAGCGAAAAGAGGAAACGAGACCGGGGC
AGGAGCAGGCGACGGCTGGGAAACGGTATTATTACGATGCGTTAGCCGAC
TACATCAACCGCACCATCATCACAGACCCGTACTATCAAGGGTACGAACT
CCTGTTCACGGGCCACAGTCTTGGTGGTGGAGTCGCTCAGATTGTTGCCT
CCCGTTTGAAAGGCGTTGCGGTCGTGTTTTCTGCGCCGGGCGTCGTACTC
TCTCGGCGAAAGTTCAAAGTTTCCCTTGAGGATGTGGATGCCTACAACGT
GAACGTGTGGGCTCTCGGAGATCTGGTACCTCTTATTGACCAACAAAGCA
TCAAGGCCCAGACAATAAGGTGTTCGCCCGAGCGTTTTAGCTATCATTGT
CATTCCATTTTGCACACCATAGATGAGATAGAGGGAAGCTGTGGAAATGG
TGATGAGGGGAGGGAGGGCGTGAGAGAGTGGGGCGGAGAAGGATGAATGG
ACGCACCCGAGCTGCAGAATTACCTCGTCGAGAACGTGCCGAGGCATCGA
TTTAGCAATGTGACATTGGTGGATTTGGGCCAGTATGGTCCGGTGACGTA
TTTGTTTGATTTGCCGCATAGCAAGGTGTTGTTGTGGGGGATCAGGGGGA
CAAATGCCCTGTTTGACTTATTTCAAGACTTGGATGCTTACAGTGAAGCA
ATCCTCATTCAATTGTGTACATCTTTATTCCCTTTGTATGCCAGTCCGAT
CTTTCAACCTCTATTGAATAAATTCGTGGGCACGAGCTATCACCTGGTTG
AAGCTCTGGCCACGCTCAAAGATGTCCTGTTGAACCGGCAGCAAGGCAGT
CAGATGGAAATTACCAATAAGCGAAAAGAGGAAACGAGACCGGGGCAGGA
GCAGGCGACGGCTGGGAAACGGTATTATTACGATGCGTTAGCCGACTACA
TCAACCGCACCATCATCACAGACCCGTACTATCAAGGGTACGAACTCCTG
TTCACGGGCCACAGTCTTGGTGGTGGAGTCGCTCAGATTGTTGCCTCCCG
TTTGAAAGGCGTTGCGGTCGTGTTTTCTGCGCCGGGCGTCGTACTCTCTC
GGCGAAAGTTCAAAGTTTCCCTTGAGGATGTGGATGCCTACAACGTGAAC
GTGTGGGCTCTCGGAGATCTGGTACCTCTTATTGACCAACAAAGCATCAA
GGCCCAGACAATAAGGTGTTCGCCCGAGCGTTTTAGCTATCATTGTCATT
CCATTTTGCACACCATAGATGAGATAGAGGGAAGCTGTGGAAATGGTGAT
GAGGGGAGGGAGGGCGTGAGAGAGTGGGGCGGAGAAGGATGA back to top
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