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Properties
Property Name | Value |
TranscriptId | 605987 |
Track | FilteredModels2 |
ProteinId | 605901 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_33 | supercontig | scaffold_33:131904..133956 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9263 ID=mRNA_9263|Name=jgi.p|Nanoce1779_2|605901|organism=Nannochloropsis oceanica|type=mRNA|length=2053bp GCACAGAGGCACCTACCCCTGCATTAAAAAAAGCATCGAGGTAATAGGGA GACATCATTATAAAGGAGAAATAATGGCGGACGACACGGCCAGCTTCCAA GATATGAGTGAGACGCAGCTCCGGCAATGGGTGGAAGCCCACCCTGAACA AGTAAATGACAAGAACGGTGGAAAATTCACTCCCTTATGCGTTGCTGTTT CAATCTTGAGCAACCTGCCACTGATTCTATGGTTGATCGATGAGAAAGGG GCGGACGTGAACGTGCGCACCAGGACGGGCTACACGCCTCTCCAACTGGC CCGGTCTCTTGACATCCTCGCTGCCTTGCTGGAGCGAGGAGCCAACCCTG TCCTGCAAAATTTACTCGGGCAATCCGCTCTCATCCACCAAGCAGCTTCT GGGCATGTCGATAATGTGGCACGTCTACTGCAAGACTCCCGGGTCCAAGC CACAGTAAATCTTAAGACCCCTTTTGGTTGGACAGCCCTCCACCACGCCT GTAGCCACATATACGAAACACCAGCCACCGCTATCGTCCATCTTCTCCTC CAAGCAGGTGCCAATCCTGCCCCCCTTGGCGATGAAGGGAAGTCCTCTTT GAGTTTGCTTCGACAGAATCGTCCCTCCCACCACAGCACCATCGCCCTTC TTGAGCAAGCCCCTGACGCAGAAAAGGCTTCCCTTCTTGTGAAAGCTCGA CGCCTTACCGTCGGCGCCTCCGTCTCCACTTCTGCCTTAGCACGTCCCTA CCTGCAGGGTCGGATGACCCAAAGACAGTCTTTCCCTCGGGTAGACCTAA TGCCAATGCGCCGCAAGAAGAAGACCGATGATCATCGCAAGTTTAGTGGT ATGCTGGGGTTTCTCTTGGGCAGCCAGGGCGGATTTAATGGCGAGGGAAT GCCGCGGGACGTATTTAGGATGGTAATGGACTTTGTAATGCCAAAATGGG ACCCGCTGAGACGTGGAATTGTGGGAGAAGGGGGAGAGCTCTTGGACGTA AGGAGCCCGTGATGGCAATTGTATAATAGTAGCAGCGGCTGTAGCCGGGG TACCAAATGCCCGTTAACAGCAACACCAATGTCAGCACTAGCAGCAGCAC TAGCAGCAGCAGCAGCAGAACCAGCACCGCTATCAATCACAACCACTATC AGTGTCTCCAAAAAGGTGTCTGAGGCGTAGAAGGGTGCCGAGAAGGTCCC TCCTGAAACCTCGTTATGTGGGCACCAGTACGGCTACCATACAACTCTCT CTTTAGCCGTCAGTCAGGTCATAGAGCCAGCCCTTTACCCGGCGAAACCG CCATCGGCAGGTCACAAGAAGGCTGCCAGCATATCCCGCCAATTTATCAT CAAGATAATGCTCACCATTGGGATGATAGCATACGCAGAGTTGTGATTGC CTTTGTCATGCTAGCCTTGGAATCGTTGAAGGAAGAGAGAGCTTGAAAAA GAAAGCGATAATAGCAGGAGCAGCAGGAGCAGTAGCACCAGCATGGAAAA GCTTCAGTAGATTAGGATTAGCAATAACAGCAAAAGCATCACTTATAGAA GTACGAGATCAGGTAAATTGACGTAGCTTCGGAGTGCATGGAAGATCTCA TGGTTCATTTCTTGATTTTTTAGCCCTAGAGTGCAAATATATTCTCAAGC AGGCGCTTAAAATGGATTTATCAAAAATGGACCGACAAGAAGACAATTTG TATTCCTTCAACAATAATCACGACCCCACAGACATATTTTGATGTTTCAC GGCCAGAGATGAAGTAATTATGACGCCAGCAAGTGGACTCACTGCCTTGT ATGCTGCCGTCACAGGCTTAAATGTCTGTTACTGGCTTAATGACTGACAG AGAGATATGCAGACTTAATCGGCAAAAGCGAAAGCGGATTTCTGCGAACT TAATGGAAAATGGAAATGGAGAAGGGAGAAGTATCAAGTTTTAGAAATCT GATGCGCGGTGAGATAGTGGAAGAGCCATAATTATAGCTCTCGCGACTTT GACCTTAAGTTTTTCACTCTGTATAGACGTATGACAAATCAGCTCATTCG GAC back to topprotein sequence of jgi.p|Nanoce1779_2|605901 >mRNA_9263-protein ID=mRNA_9263-protein|Name=jgi.p|Nanoce1779_2|605901|organism=Nannochloropsis oceanica|type=polypeptide|length=313bp MADDTASFQDMSETQLRQWVEAHPEQVNDKNGGKFTPLCVAVSILSNLPL ILWLIDEKGADVNVRTRTGYTPLQLARSLDILAALLERGANPVLQNLLGQ SALIHQAASGHVDNVARLLQDSRVQATVNLKTPFGWTALHHACSHIYETP ATAIVHLLLQAGANPAPLGDEGKSSLSLLRQNRPSHHSTIALLEQAPDAE KASLLVKARRLTVGASVSTSALARPYLQGRMTQRQSFPRVDLMPMRRKKK TDDHRKFSGMLGFLLGSQGGFNGEGMPRDVFRMVMDFVMPKWDPLRRGIV GEGGELLDVRSP* back to topmRNA from alignment at scaffold_33:131904..133956+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9263 ID=mRNA_9263|Name=jgi.p|Nanoce1779_2|605901|organism=Nannochloropsis oceanica|type=mRNA|length=2053bp|location=Sequence derived from alignment at scaffold_33:131904..133956+ (Nannochloropsis oceanica) GCACAGAGGCACCTACCCCTGCATTAAAAAAAGCATCGAGGTAATAGGGA
GACATCATTATAAAGGAGAAATAATGGCGGACGACACGGCCAGCTTCCAA
GATATGAGTGAGACGCAGCTCCGGCAATGGGTGGAAGCCCACCCTGAACA
AGTAAATGACAAGAACGGTGGAAAATTCACTCCCTTATGCGTTGCTGTTT
CAATCTTGAGCAACCTGCCACTGATTCTATGGTTGATCGATGAGAAAGGG
GCGGACGTGAACGTGCGCACCAGGACGGGCTACACGCCTCTCCAACTGGC
CCGGTCTCTTGACATCCTCGCTGCCTTGCTGGAGCGAGGAGCCAACCCTG
TCCTGCAAAATTTACTCGGGCAATCCGCTCTCATCCACCAAGCAGCTTCT
GGGCATGTCGATAATGTGGCACGTCTACTGCAAGACTCCCGGGTCCAAGC
CACAGTAAATCTTAAGACCCCTTTTGGTTGGACAGCCCTCCACCACGCCT
GTAGCCACATATACGAAACACCAGCCACCGCTATCGTCCATCTTCTCCTC
CAAGCAGGTGCCAATCCTGCCCCCCTTGGCGATGAAGGGAAGTCCTCTTT
GAGTTTGCTTCGACAGAATCGTCCCTCCCACCACAGCACCATCGCCCTTC
TTGAGCAAGCCCCTGACGCAGAAAAGGCTTCCCTTCTTGTGAAAGCTCGA
CGCCTTACCGTCGGCGCCTCCGTCTCCACTTCTGCCTTAGCACGTCCCTA
CCTGCAGGGTCGGATGACCCAAAGACAGTCTTTCCCTCGGGTAGACCTAA
TGCCAATGCGCCGCAAGAAGAAGACCGATGATCATCGCAAGTTTAGTGGT
ATGCTGGGGTTTCTCTTGGGCAGCCAGGGCGGATTTAATGGCGAGGGAAT
GCCGCGGGACGTATTTAGGATGGTAATGGACTTTGTAATGCCAAAATGGG
ACCCGCTGAGACGTGGAATTGTGGGAGAAGGGGGAGAGCTCTTGGACGTA
AGGAGCCCGTGATGGCAATTGTATAATAGTAGCAGCGGCTGTAGCCGGGG
TACCAAATGCCCGTTAACAGCAACACCAATGTCAGCACTAGCAGCAGCAC
TAGCAGCAGCAGCAGCAGAACCAGCACCGCTATCAATCACAACCACTATC
AGTGTCTCCAAAAAGGTGTCTGAGGCGTAGAAGGGTGCCGAGAAGGTCCC
TCCTGAAACCTCGTTATGTGGGCACCAGTACGGCTACCATACAACTCTCT
CTTTAGCCGTCAGTCAGGTCATAGAGCCAGCCCTTTACCCGGCGAAACCG
CCATCGGCAGGTCACAAGAAGGCTGCCAGCATATCCCGCCAATTTATCAT
CAAGATAATGCTCACCATTGGGATGATAGCATACGCAGAGTTGTGATTGC
CTTTGTCATGCTAGCCTTGGAATCGTTGAAGGAAGAGAGAGCTTGAAAAA
GAAAGCGATAATAGCAGGAGCAGCAGGAGCAGTAGCACCAGCATGGAAAA
GCTTCAGTAGATTAGGATTAGCAATAACAGCAAAAGCATCACTTATAGAA
GTACGAGATCAGGTAAATTGACGTAGCTTCGGAGTGCATGGAAGATCTCA
TGGTTCATTTCTTGATTTTTTAGCCCTAGAGTGCAAATATATTCTCAAGC
AGGCGCTTAAAATGGATTTATCAAAAATGGACCGACAAGAAGACAATTTG
TATTCCTTCAACAATAATCACGACCCCACAGACATATTTTGATGTTTCAC
GGCCAGAGATGAAGTAATTATGACGCCAGCAAGTGGACTCACTGCCTTGT
ATGCTGCCGTCACAGGCTTAAATGTCTGTTACTGGCTTAATGACTGACAG
AGAGATATGCAGACTTAATCGGCAAAAGCGAAAGCGGATTTCTGCGAACT
TAATGGAAAATGGAAATGGAGAAGGGAGAAGTATCAAGTTTTAGAAATCT
GATGCGCGGTGAGATAGTGGAAGAGCCATAATTATAGCTCTCGCGACTTT
GACCTTAAGTTTTTCACTCTGTATAGACGTATGACAAATCAGCTCATTCG
GAC back to topCoding sequence (CDS) from alignment at scaffold_33:131904..133956+ >mRNA_9263 ID=mRNA_9263|Name=jgi.p|Nanoce1779_2|605901|organism=Nannochloropsis oceanica|type=CDS|length=939bp|location=Sequence derived from alignment at scaffold_33:131904..133956+ (Nannochloropsis oceanica) ATGGCGGACGACACGGCCAGCTTCCAAGATATGAGTGAGACGCAGCTCCG GCAATGGGTGGAAGCCCACCCTGAACAAGTAAATGACAAGAACGGTGGAA AATTCACTCCCTTATGCGTTGCTGTTTCAATCTTGAGCAACCTGCCACTG ATTCTATGGTTGATCGATGAGAAAGGGGCGGACGTGAACGTGCGCACCAG GACGGGCTACACGCCTCTCCAACTGGCCCGGTCTCTTGACATCCTCGCTG CCTTGCTGGAGCGAGGAGCCAACCCTGTCCTGCAAAATTTACTCGGGCAA TCCGCTCTCATCCACCAAGCAGCTTCTGGGCATGTCGATAATGTGGCACG TCTACTGCAAGACTCCCGGGTCCAAGCCACAGTAAATCTTAAGACCCCTT TTGGTTGGACAGCCCTCCACCACGCCTGTAGCCACATATACGAAACACCA GCCACCGCTATCGTCCATCTTCTCCTCCAAGCAGGTGCCAATCCTGCCCC CCTTGGCGATGAAGGGAAGTCCTCTTTGAGTTTGCTTCGACAGAATCGTC CCTCCCACCACAGCACCATCGCCCTTCTTGAGCAAGCCCCTGACGCAGAA AAGGCTTCCCTTCTTGTGAAAGCTCGACGCCTTACCGTCGGCGCCTCCGT CTCCACTTCTGCCTTAGCACGTCCCTACCTGCAGGGTCGGATGACCCAAA GACAGTCTTTCCCTCGGGTAGACCTAATGCCAATGCGCCGCAAGAAGAAG ACCGATGATCATCGCAAGTTTAGTGGTATGCTGGGGTTTCTCTTGGGCAG CCAGGGCGGATTTAATGGCGAGGGAATGCCGCGGGACGTATTTAGGATGG TAATGGACTTTGTAATGCCAAAATGGGACCCGCTGAGACGTGGAATTGTG GGAGAAGGGGGAGAGCTCTTGGACGTAAGGAGCCCGTGA back to top
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