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Properties
Property Name | Value |
TranscriptId | 606816 |
Track | FilteredModels2 |
ProteinId | 606730 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_36 | supercontig | scaffold_36:110640..112580 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9164 ID=mRNA_9164|Name=jgi.p|Nanoce1779_2|606730|organism=Nannochloropsis oceanica|type=mRNA|length=1941bp TGCAGCAGCAGCACCACCACCACCACCAACAACAACGGCAGCAGCAGCAA AAGCTGCAGATGTTGTGGTCTCCACAAAATTCGCAGAAGCATATTTTGAC ACCCTTCCAGCGACTGGTGCTCCGGCAGCAGCAGCAGCTACATCAAGAGC CACTCATTTTTCTTCCCTCCAACTGCCCTTCCAAGTTCCAGCAGCAGCGA CAGCAGGAGGAGGAGCAGTCATCTCCCTTTGTAGCTTTATCAGCAGCATG TGAAGGGCATTTCTTGGTTGAGAGATCAAAGAGGGAGGAGGAAAGGGGAG GGGGAGAGCAGGGAAAGGACGGCTCCACGAGCGGCATACAAGAGGGATGG ATGACCTTCCCTCCCATTCTTCCCGCCATTGCTGCTGCTACGCCTGATCA CGATACTGCTCTTGCTTCTTCTGCTGTATTTGGTGAAGCGAGAGGAGTGA AGCGAACACGCATGGAGGGAAGAGGACAGCGGGGAATGATCGGAGAGAAA GGAAGCGGAGGAAGAGGAGGACGGTCACCAGAAAGGGGCACTGTCCCAAG AGAAAACCAGTTTCAACTTCACAGTCCAAGTGGTAGTGGCAGCAGTTTGA GCCGCAGCAGCTTTACTTGCATGAAGGGCCGTGGCACCTGCCATAAATAC CCGGGTGAAAAGCATGCCAGGCGGGCTCCAAGGGGGCCTCTAGCGTCGCC GGCCTACCCGACGCCCCTCCTCGCGAGACGTATGGTGCTTGGTGAGAACA ATCGACTCACACTCCAGGACGAACAATATCGACAGCAGCAGCAGCAACAG CAGCAGCAGACACATCCTGGATCCTTCCTTTTAAAGAGCAGCAGCACCAG CACCGTCAGCAGCTTTGGCAGCACCATGAGAGGAGGAGGAGATGAACTTC TAAATCTTTTAATGGGCTTCGACCGCATCAACGACTCGTCTTCTCATTGT TGTACTTGTCGTGCTTCTCCTTCCTGTTCTTCTTCCCCTTCATCTTATGC GTCATCAAGTGGCATGCTTTTTTACCGACGGGAGAACAACCGCTTAACGA CCATTATTCGATCCCTTGAAGGAAAGCTGTTCACCCTGACTTCTCAACTA GAGAACCAGCGGCTGCAGCAGGAGGAACAGCGAAAGCAGCAGGAGATTGA GTCACTTGCAGACGGGTGGTGGTGTCACGAACTGCTTTTCTCCTCCCTTC CATACTCCCTTCCTTCCTCCCCATCCTCTCTTCTGCCGCGTGATGACGTC GCGCTGGAAGAGAGCTTGGACCGATTTTTGGTTGAGATGTTGAACGGCTT CAACGGCGAAGGCATGCTTTGAGAAGAACGTTTATTCCCCATCTCATTTT CGTCCTCTCTCACTCTCTCCATTTCTCCTCCCTCCCTCTTCCTTCCCTCA CTGCACGAGGTGAAATCGACTTAGAAAATAGGAGCATGATAAGGAGCATG ATGAACACTCAATCAAGACGACTACCACCTTGGTAGAGTGAGAGAGTGTG TATCTGTTTATCTATCTATCTACATTGAAACATGCCAGTAACTTTCCAGC AACCAAGCGACCAGATGCACGCCTCGATTCCTCATGAAACCAGGCCAAGC CAAGCCGAGCAACACTAGATAAGGAAACCAACGACCGGAGAAGGCAAGAA GGAGAGTGGACCTGGTAGAACGCGAATTACATCGTAACTTTATACGTGCA CAGACAAATACACTCAAACATGACCCCTCATCTCGATGATATGTTGAACA AAGCACAAAGCAAGACAATAAAAGCTGAACAAGAGAGGAGAGAGAGAAGA GGAAGCAATGGCCTCTCAATAATAGGTTCACTTTAAAATGTGTGGAAAGT AAAATATCCCGCTTCACACCTACGACTCCAGCTTTTCAAAAACGACAAAG ATTCAAAGAAAAGAAGTATGCATGCAGCCAGATGGAAGCCA back to topprotein sequence of jgi.p|Nanoce1779_2|606730 >mRNA_9164-protein ID=mRNA_9164-protein|Name=jgi.p|Nanoce1779_2|606730|organism=Nannochloropsis oceanica|type=polypeptide|length=421bp MLWSPQNSQKHILTPFQRLVLRQQQQLHQEPLIFLPSNCPSKFQQQRQQE EEQSSPFVALSAACEGHFLVERSKREEERGGGEQGKDGSTSGIQEGWMTF PPILPAIAAATPDHDTALASSAVFGEARGVKRTRMEGRGQRGMIGEKGSG GRGGRSPERGTVPRENQFQLHSPSGSGSSLSRSSFTCMKGRGTCHKYPGE KHARRAPRGPLASPAYPTPLLARRMVLGENNRLTLQDEQYRQQQQQQQQQ THPGSFLLKSSSTSTVSSFGSTMRGGGDELLNLLMGFDRINDSSSHCCTC RASPSCSSSPSSYASSSGMLFYRRENNRLTTIIRSLEGKLFTLTSQLENQ RLQQEEQRKQQEIESLADGWWCHELLFSSLPYSLPSSPSSLLPRDDVALE ESLDRFLVEMLNGFNGEGML* back to topmRNA from alignment at scaffold_36:110640..112580+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9164 ID=mRNA_9164|Name=jgi.p|Nanoce1779_2|606730|organism=Nannochloropsis oceanica|type=mRNA|length=1941bp|location=Sequence derived from alignment at scaffold_36:110640..112580+ (Nannochloropsis oceanica) TGCAGCAGCAGCACCACCACCACCACCAACAACAACGGCAGCAGCAGCAA
AAGCTGCAGATGTTGTGGTCTCCACAAAATTCGCAGAAGCATATTTTGAC
ACCCTTCCAGCGACTGGTGCTCCGGCAGCAGCAGCAGCTACATCAAGAGC
CACTCATTTTTCTTCCCTCCAACTGCCCTTCCAAGTTCCAGCAGCAGCGA
CAGCAGGAGGAGGAGCAGTCATCTCCCTTTGTAGCTTTATCAGCAGCATG
TGAAGGGCATTTCTTGGTTGAGAGATCAAAGAGGGAGGAGGAAAGGGGAG
GGGGAGAGCAGGGAAAGGACGGCTCCACGAGCGGCATACAAGAGGGATGG
ATGACCTTCCCTCCCATTCTTCCCGCCATTGCTGCTGCTACGCCTGATCA
CGATACTGCTCTTGCTTCTTCTGCTGTATTTGGTGAAGCGAGAGGAGTGA
AGCGAACACGCATGGAGGGAAGAGGACAGCGGGGAATGATCGGAGAGAAA
GGAAGCGGAGGAAGAGGAGGACGGTCACCAGAAAGGGGCACTGTCCCAAG
AGAAAACCAGTTTCAACTTCACAGTCCAAGTGGTAGTGGCAGCAGTTTGA
GCCGCAGCAGCTTTACTTGCATGAAGGGCCGTGGCACCTGCCATAAATAC
CCGGGTGAAAAGCATGCCAGGCGGGCTCCAAGGGGGCCTCTAGCGTCGCC
GGCCTACCCGACGCCCCTCCTCGCGAGACGTATGGTGCTTGGTGAGAACA
ATCGACTCACACTCCAGGACGAACAATATCGACAGCAGCAGCAGCAACAG
CAGCAGCAGACACATCCTGGATCCTTCCTTTTAAAGAGCAGCAGCACCAG
CACCGTCAGCAGCTTTGGCAGCACCATGAGAGGAGGAGGAGATGAACTTC
TAAATCTTTTAATGGGCTTCGACCGCATCAACGACTCGTCTTCTCATTGT
TGTACTTGTCGTGCTTCTCCTTCCTGTTCTTCTTCCCCTTCATCTTATGC
GTCATCAAGTGGCATGCTTTTTTACCGACGGGAGAACAACCGCTTAACGA
CCATTATTCGATCCCTTGAAGGAAAGCTGTTCACCCTGACTTCTCAACTA
GAGAACCAGCGGCTGCAGCAGGAGGAACAGCGAAAGCAGCAGGAGATTGA
GTCACTTGCAGACGGGTGGTGGTGTCACGAACTGCTTTTCTCCTCCCTTC
CATACTCCCTTCCTTCCTCCCCATCCTCTCTTCTGCCGCGTGATGACGTC
GCGCTGGAAGAGAGCTTGGACCGATTTTTGGTTGAGATGTTGAACGGCTT
CAACGGCGAAGGCATGCTTTGAGAAGAACGTTTATTCCCCATCTCATTTT
CGTCCTCTCTCACTCTCTCCATTTCTCCTCCCTCCCTCTTCCTTCCCTCA
CTGCACGAGGTGAAATCGACTTAGAAAATAGGAGCATGATAAGGAGCATG
ATGAACACTCAATCAAGACGACTACCACCTTGGTAGAGTGAGAGAGTGTG
TATCTGTTTATCTATCTATCTACATTGAAACATGCCAGTAACTTTCCAGC
AACCAAGCGACCAGATGCACGCCTCGATTCCTCATGAAACCAGGCCAAGC
CAAGCCGAGCAACACTAGATAAGGAAACCAACGACCGGAGAAGGCAAGAA
GGAGAGTGGACCTGGTAGAACGCGAATTACATCGTAACTTTATACGTGCA
CAGACAAATACACTCAAACATGACCCCTCATCTCGATGATATGTTGAACA
AAGCACAAAGCAAGACAATAAAAGCTGAACAAGAGAGGAGAGAGAGAAGA
GGAAGCAATGGCCTCTCAATAATAGGTTCACTTTAAAATGTGTGGAAAGT
AAAATATCCCGCTTCACACCTACGACTCCAGCTTTTCAAAAACGACAAAG
ATTCAAAGAAAAGAAGTATGCATGCAGCCAGATGGAAGCCA back to topCoding sequence (CDS) from alignment at scaffold_36:110640..112580+ >mRNA_9164 ID=mRNA_9164|Name=jgi.p|Nanoce1779_2|606730|organism=Nannochloropsis oceanica|type=CDS|length=1263bp|location=Sequence derived from alignment at scaffold_36:110640..112580+ (Nannochloropsis oceanica) ATGTTGTGGTCTCCACAAAATTCGCAGAAGCATATTTTGACACCCTTCCA GCGACTGGTGCTCCGGCAGCAGCAGCAGCTACATCAAGAGCCACTCATTT TTCTTCCCTCCAACTGCCCTTCCAAGTTCCAGCAGCAGCGACAGCAGGAG GAGGAGCAGTCATCTCCCTTTGTAGCTTTATCAGCAGCATGTGAAGGGCA TTTCTTGGTTGAGAGATCAAAGAGGGAGGAGGAAAGGGGAGGGGGAGAGC AGGGAAAGGACGGCTCCACGAGCGGCATACAAGAGGGATGGATGACCTTC CCTCCCATTCTTCCCGCCATTGCTGCTGCTACGCCTGATCACGATACTGC TCTTGCTTCTTCTGCTGTATTTGGTGAAGCGAGAGGAGTGAAGCGAACAC GCATGGAGGGAAGAGGACAGCGGGGAATGATCGGAGAGAAAGGAAGCGGA GGAAGAGGAGGACGGTCACCAGAAAGGGGCACTGTCCCAAGAGAAAACCA GTTTCAACTTCACAGTCCAAGTGGTAGTGGCAGCAGTTTGAGCCGCAGCA GCTTTACTTGCATGAAGGGCCGTGGCACCTGCCATAAATACCCGGGTGAA AAGCATGCCAGGCGGGCTCCAAGGGGGCCTCTAGCGTCGCCGGCCTACCC GACGCCCCTCCTCGCGAGACGTATGGTGCTTGGTGAGAACAATCGACTCA CACTCCAGGACGAACAATATCGACAGCAGCAGCAGCAACAGCAGCAGCAG ACACATCCTGGATCCTTCCTTTTAAAGAGCAGCAGCACCAGCACCGTCAG CAGCTTTGGCAGCACCATGAGAGGAGGAGGAGATGAACTTCTAAATCTTT TAATGGGCTTCGACCGCATCAACGACTCGTCTTCTCATTGTTGTACTTGT CGTGCTTCTCCTTCCTGTTCTTCTTCCCCTTCATCTTATGCGTCATCAAG TGGCATGCTTTTTTACCGACGGGAGAACAACCGCTTAACGACCATTATTC GATCCCTTGAAGGAAAGCTGTTCACCCTGACTTCTCAACTAGAGAACCAG CGGCTGCAGCAGGAGGAACAGCGAAAGCAGCAGGAGATTGAGTCACTTGC AGACGGGTGGTGGTGTCACGAACTGCTTTTCTCCTCCCTTCCATACTCCC TTCCTTCCTCCCCATCCTCTCTTCTGCCGCGTGATGACGTCGCGCTGGAA GAGAGCTTGGACCGATTTTTGGTTGAGATGTTGAACGGCTTCAACGGCGA AGGCATGCTTTGA back to top
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