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Properties
| Property Name | Value |
|---|
| TranscriptId | 609890 |
| Track | FilteredModels2 |
| ProteinId | 609804 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:31061..33349 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10256 ID=mRNA_10256|Name=jgi.p|Nanoce1779_2|609804|organism=Nannochloropsis oceanica|type=mRNA|length=1149bp
CAGGTCGGCGCTCCTGAGGACGCAATTTTGTGTGGCAAGGGCGTTGGCCC
AGCCCTACGAGAGAGGAGGTCGACCCTTGAGACCGACTCGAGACCCCTCC
TCCATATCTCCCCGTCTGTAATCAAGGCAGCGATGGCAACCGCCGGCCTT
GCATACACCAAAGGCCGGGTGGTGGGCAAGGGTACTTGGGGCAGTGTCTG
CTTGGGCACGGTCAGCAAGACGGGGCGGAAGGTGGCCATCAAAGAGATCC
ACCGTTCCATGGAGAGATACGAGGACGGAGTCAACTTCTCGGTCCTGCGC
GAGATCAAGGTGTTGATGGAACTCAAGCACACCAACATCGTGGAGTTACT
CGATGTCCGCGTCACGGAGGACGGGCTCGAACTTGTCTTGGATTACTGCG
AGACAAACCTGAAGCGGGTTGTAGAGGACCGCCGCTTGGTCAAGGCAATT
CGGTATGAGGATACCAAAGGCTTCATGCAGCAGCTATTGCGGGGCCTCCA
CTTCCTCCACTCCAACTGGATCTTGCATCGAGATCTCAAACCAGATAACA
TCCTGCTCACAGCCAAGGGTGTTCTTAAGATCGCGGATTTCGGCCTCGCG
CGTTATTTTGGGAACCCCAACGAGACCCTCTCCCCTGGCTTTCAAGTCAT
TACTCGGCAGTATCGACCGCCCGAGCTTCTGTTAGGCAGTCGATTGTATG
GCCCCGCAGTGGATATATGGTCGGTGGGTTGTATCATGGGAGAGGTCCGA
TTGCGCGAGTTGCTGTTCCGCGGAGATGTGGACACGGACATTGCGCAACT
GGCCAAGATCTTTCAGATTCTAGGTACGCGAAAAGACGGGAGGGAGTGGC
CGGGGAGAAAGGAAACGAGCGAGCGATGTGCAGTAAGTGTGTTGTTGATG
ATTACAAACATTAAACGAATGAACAATCCTAGTCTGACTTCTCTTTATGG
AGAGAAACTTTATGCGGTTATGAGAATGAAACAGCACGTACACACAAACG
CTTCGTGAAGCTGAGGAGGCGTAGGAGGAGGGGCACAGGGGTGCAAGGTC
TGCACCTATGGAGTCAGATCGTGTCCCCCCAGCTGTCTCTCGCTTTCTCA
CCACCTACAAATCATGAAAACAACAGGCACGCCCACCGAAGCGAATTGG back to topprotein sequence of jgi.p|Nanoce1779_2|609804 >mRNA_10256-protein ID=mRNA_10256-protein|Name=jgi.p|Nanoce1779_2|609804|organism=Nannochloropsis oceanica|type=polypeptide|length=292bp
MATAGLAYTKGRVVGKGTWGSVCLGTVSKTGRKVAIKEIHRSMERYEDGV
NFSVLREIKVLMELKHTNIVELLDVRVTEDGLELVLDYCETNLKRVVEDR
RLVKAIRYEDTKGFMQQLLRGLHFLHSNWILHRDLKPDNILLTAKGVLKI
ADFGLARYFGNPNETLSPGFQVITRQYRPPELLLGSRLYGPAVDIWSVGC
IMGEVRLRELLFRGDVDTDIAQLAKIFQILGTRKDGREWPGRKETSERCA
VSVLLMITNIKRMNNPSLTSLYGEKLYAVMRMKQHVHTNAS* back to topmRNA from alignment at scaffold_47:31061..33349- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10256 ID=mRNA_10256|Name=jgi.p|Nanoce1779_2|609804|organism=Nannochloropsis oceanica|type=mRNA|length=2289bp|location=Sequence derived from alignment at scaffold_47:31061..33349- (Nannochloropsis oceanica)
CAGGTCGGCGCTCCTGAGGACGCAATTTTGTGTGGCAAGGGCGTTGGCCC
AGCCCTACGAGAGAGGAGGTCGACCCTTGAGACCGACTCGAGACCCCTCC
TCCATATCTCCCCGTCTGTAATCAAGGCAGCGATGGCAACCGCCGGCCTT
GCATACACCAAAGGCCGGGTGGTGGGCAAGGGTACTTGGGGCAGTGTCTG
CTTGGGCACGGTCAGCAAGACGGGGCGGAAGGTGGCCATCAAAGAGATCC
ACCGTTCCATGGAGAGATACGAGGTGAGCTAGGTTCGAAACGAGATGGGG
AGAAAGACAGGGGAAATTTACAGCTGATCTCCACTAGGACCATGTATCTG
GCTTATCTGTGGATTGATTGGACTCGGTGAGGACGAAGAGGATCTCGGTG
AGGGTGAGCATGCCGCGCTTGATAGACAACTTCGCCCTCATCTTCATTGC
CTTCATGTCCCCGTGACGCTTCCATACCTCTTCGCCAGACATCACTACAA
TTTCCGATCGACACATCTTCCATTTTCAGGTTAACCACTTATCATTCACT
ACGTTAACACGTAAAATCACAGGACGGAGTCAACTTCTCGGTCCTGCGCG
AGATCAAGGTGTTGATGGAACTCAAGCACACCAACATCGTGGAGTTACTC
GATGTCCGCGTCACGGAGGACGGGCTCGAACTTGTCTTGGATTACTGCGA
GACAAACCTGAAGCGGGTACGTGGTTTTGCGTTCGGTTTGTCTTTGGGCG
CCCCAGATTTAAGCTTTTACAAATATAGGTGCTAGTGGCCTCTCTATTCT
CCTTCCGTCCTCCCCTTCAAGGTATCTCTCGGATTTTTACTGATGATTCT
TCTGTATTCAAACCTTTCCATTCATCAGGTTGTAGAGGACCGCCGCTTGG
TCAAGGCAATTCGGTATGAGGATACCAAAGGCTTCATGCAGCAGCTATTG
CGGGGCCTCCACTTCCTCCACTCCAACTGGATCTTGCATCGGTATGTCCT
TCGGGCGGGATTTTGGTTTTGTCCTCTGAAACGATGATGTGTGTAGCCAT
ATACCCACGTGACTGTGTGCGCTGGCACGTGTGCCTGTGTAAGGGAGCTG
GGAGGAGTTATCTTCAAAAGAGACAGTCTTGTCTTGTTGCTTGTAGATGC
AAAACTGATTATCTAACCCCGTCTGTCAGCCGCCCTCACTCACATCCCCT
TCACCTTTCCTATATCCAATCATCAGAGATCTCAAACCAGATAACATCCT
GCTCACAGCCAAGGGTGTTCTTAAGATCGCGGATTTCGGCCTCGCGCGTT
ATTTTGGGAACCCCAACGAGACCCTCTCCCCTGGCTTTCAAGTCATTACT
CGGCAGTATCGACCGCCCGAGCTTCTGTTAGGCAGTCGATTGTATGGCCC
CGCAGTGGATATATGGTCGGTGGGTTGTATCATGGTACGTTCTCTCAAGA
TAAGAGTCATATATTTTGTAATATTGTTTTGCGAAGACGCCTGTGGCCTG
ATGCCGGCAGCTACCCCGTCACGCGGGGCGGGCTTATTTTGGTGCACGCA
CTTTGTCAATAAATTTATAATCACGGTGGTAACATTTTTTAGTTGTCAGT
ATGGCGAATGTAGGTACTAATAAAATTGGTGCCTCAAATAAGAAAGTGGC
CGCGTGATTAGATCTTATTTTAGGTCATGTTGGCTATGGTTGCAGGGTGA
TGTGTGTGTCGGAAAATTTATAAATATGTGGCTATCCTTTAGACTTCGAT
CGATCCTTCATGTGCATCACTCATTTGATAAGCCCAAGCAATTCGACTGA
CATGTCACAGGCTTTAGTTTTCTCCGCTATGTTCCTTTGTTTCGGCACTC
ACGCACTTGCACACGCCCATATACACAGGGAGAGGTCCGATTGCGCGAGT
TGCTGTTCCGCGGAGATGTGGACACGGACATTGCGCAACTGGCCAAGATC
TTTCAGATTCTAGGTACGCGAAAAGACGGGAGGGAGTGGCCGGGGAGAAA
GGAAACGAGCGAGCGATGTGCAGTAAGTGTGTTGTTGATGATTACAAACA
TTAAACGAATGAACAATCCTAGTCTGACTTCTCTTTATGGAGAGAAACTT
TATGCGGTTATGAGAATGAAACAGCACGTACACACAAACGCTTCGTGAAG
CTGAGGAGGCGTAGGAGGAGGGGCACAGGGGTGCAAGGTCTGCACCTATG
GAGTCAGATCGTGTCCCCCCAGCTGTCTCTCGCTTTCTCACCACCTACAA
ATCATGAAAACAACAGGCACGCCCACCGAAGCGAATTGG back to topCoding sequence (CDS) from alignment at scaffold_47:31061..33349- >mRNA_10256 ID=mRNA_10256|Name=jgi.p|Nanoce1779_2|609804|organism=Nannochloropsis oceanica|type=CDS|length=4380bp|location=Sequence derived from alignment at scaffold_47:31061..33349- (Nannochloropsis oceanica)
GGAGAGGTCCGATTGCGCGAGTTGCTGTTCCGCGGAGATGTGGACACGGA
CATTGCGCAACTGGCCAAGATCTTTCAGATTCTAGGTACGCGAAAAGACG
GGAGGGAGTGGCCGGGGAGAAAGGAAACGAGCGAGCGATGTGCAGTAAGT
GTGTTGTTGATGATTACAAACATTAAACGAATGAACAATCCTAGTCTGAC
TTCTCTTTATGGAGAGAAACTTTATGCGGTTATGAGAATGAAACAGCACG
TACACACAAACGCTTCGTGAAGATCTCAAACCAGATAACATCCTGCTCAC
AGCCAAGGGTGTTCTTAAGATCGCGGATTTCGGCCTCGCGCGTTATTTTG
GGAACCCCAACGAGACCCTCTCCCCTGGCTTTCAAGTCATTACTCGGCAG
TATCGACCGCCCGAGCTTCTGTTAGGCAGTCGATTGTATGGCCCCGCAGT
GGATATATGGTCGGTGGGTTGTATCATGGTTGTAGAGGACCGCCGCTTGG
TCAAGGCAATTCGGTATGAGGATACCAAAGGCTTCATGCAGCAGCTATTG
CGGGGCCTCCACTTCCTCCACTCCAACTGGATCTTGCATCGGACGGAGTC
AACTTCTCGGTCCTGCGCGAGATCAAGGTGTTGATGGAACTCAAGCACAC
CAACATCGTGGAGTTACTCGATGTCCGCGTCACGGAGGACGGGCTCGAAC
TTGTCTTGGATTACTGCGAGACAAACCTGAAGCGGATGGCAACCGCCGGC
CTTGCATACACCAAAGGCCGGGTGGTGGGCAAGGGTACTTGGGGCAGTGT
CTGCTTGGGCACGGTCAGCAAGACGGGGCGGAAGGTGGCCATCAAAGAGA
TCCACCGTTCCATGGAGAGATACGAGGGAGAGGTCCGATTGCGCGAGTTG
CTGTTCCGCGGAGATGTGGACACGGACATTGCGCAACTGGCCAAGATCTT
TCAGATTCTAGGTACGCGAAAAGACGGGAGGGAGTGGCCGGGGAGAAAGG
AAACGAGCGAGCGATGTGCAGTAAGTGTGTTGTTGATGATTACAAACATT
AAACGAATGAACAATCCTAGTCTGACTTCTCTTTATGGAGAGAAACTTTA
TGCGGTTATGAGAATGAAACAGCACGTACACACAAACGCTTCGTGAAGAT
CTCAAACCAGATAACATCCTGCTCACAGCCAAGGGTGTTCTTAAGATCGC
GGATTTCGGCCTCGCGCGTTATTTTGGGAACCCCAACGAGACCCTCTCCC
CTGGCTTTCAAGTCATTACTCGGCAGTATCGACCGCCCGAGCTTCTGTTA
GGCAGTCGATTGTATGGCCCCGCAGTGGATATATGGTCGGTGGGTTGTAT
CATGGTTGTAGAGGACCGCCGCTTGGTCAAGGCAATTCGGTATGAGGATA
CCAAAGGCTTCATGCAGCAGCTATTGCGGGGCCTCCACTTCCTCCACTCC
AACTGGATCTTGCATCGGACGGAGTCAACTTCTCGGTCCTGCGCGAGATC
AAGGTGTTGATGGAACTCAAGCACACCAACATCGTGGAGTTACTCGATGT
CCGCGTCACGGAGGACGGGCTCGAACTTGTCTTGGATTACTGCGAGACAA
ACCTGAAGCGGATGGCAACCGCCGGCCTTGCATACACCAAAGGCCGGGTG
GTGGGCAAGGGTACTTGGGGCAGTGTCTGCTTGGGCACGGTCAGCAAGAC
GGGGCGGAAGGTGGCCATCAAAGAGATCCACCGTTCCATGGAGAGATACG
AGGGAGAGGTCCGATTGCGCGAGTTGCTGTTCCGCGGAGATGTGGACACG
GACATTGCGCAACTGGCCAAGATCTTTCAGATTCTAGGTACGCGAAAAGA
CGGGAGGGAGTGGCCGGGGAGAAAGGAAACGAGCGAGCGATGTGCAGTAA
GTGTGTTGTTGATGATTACAAACATTAAACGAATGAACAATCCTAGTCTG
ACTTCTCTTTATGGAGAGAAACTTTATGCGGTTATGAGAATGAAACAGCA
CGTACACACAAACGCTTCGTGAAGATCTCAAACCAGATAACATCCTGCTC
ACAGCCAAGGGTGTTCTTAAGATCGCGGATTTCGGCCTCGCGCGTTATTT
TGGGAACCCCAACGAGACCCTCTCCCCTGGCTTTCAAGTCATTACTCGGC
AGTATCGACCGCCCGAGCTTCTGTTAGGCAGTCGATTGTATGGCCCCGCA
GTGGATATATGGTCGGTGGGTTGTATCATGGTTGTAGAGGACCGCCGCTT
GGTCAAGGCAATTCGGTATGAGGATACCAAAGGCTTCATGCAGCAGCTAT
TGCGGGGCCTCCACTTCCTCCACTCCAACTGGATCTTGCATCGGACGGAG
TCAACTTCTCGGTCCTGCGCGAGATCAAGGTGTTGATGGAACTCAAGCAC
ACCAACATCGTGGAGTTACTCGATGTCCGCGTCACGGAGGACGGGCTCGA
ACTTGTCTTGGATTACTGCGAGACAAACCTGAAGCGGATGGCAACCGCCG
GCCTTGCATACACCAAAGGCCGGGTGGTGGGCAAGGGTACTTGGGGCAGT
GTCTGCTTGGGCACGGTCAGCAAGACGGGGCGGAAGGTGGCCATCAAAGA
GATCCACCGTTCCATGGAGAGATACGAGGGAGAGGTCCGATTGCGCGAGT
TGCTGTTCCGCGGAGATGTGGACACGGACATTGCGCAACTGGCCAAGATC
TTTCAGATTCTAGGTACGCGAAAAGACGGGAGGGAGTGGCCGGGGAGAAA
GGAAACGAGCGAGCGATGTGCAGTAAGTGTGTTGTTGATGATTACAAACA
TTAAACGAATGAACAATCCTAGTCTGACTTCTCTTTATGGAGAGAAACTT
TATGCGGTTATGAGAATGAAACAGCACGTACACACAAACGCTTCGTGAAG
ATCTCAAACCAGATAACATCCTGCTCACAGCCAAGGGTGTTCTTAAGATC
GCGGATTTCGGCCTCGCGCGTTATTTTGGGAACCCCAACGAGACCCTCTC
CCCTGGCTTTCAAGTCATTACTCGGCAGTATCGACCGCCCGAGCTTCTGT
TAGGCAGTCGATTGTATGGCCCCGCAGTGGATATATGGTCGGTGGGTTGT
ATCATGGTTGTAGAGGACCGCCGCTTGGTCAAGGCAATTCGGTATGAGGA
TACCAAAGGCTTCATGCAGCAGCTATTGCGGGGCCTCCACTTCCTCCACT
CCAACTGGATCTTGCATCGGACGGAGTCAACTTCTCGGTCCTGCGCGAGA
TCAAGGTGTTGATGGAACTCAAGCACACCAACATCGTGGAGTTACTCGAT
GTCCGCGTCACGGAGGACGGGCTCGAACTTGTCTTGGATTACTGCGAGAC
AAACCTGAAGCGGATGGCAACCGCCGGCCTTGCATACACCAAAGGCCGGG
TGGTGGGCAAGGGTACTTGGGGCAGTGTCTGCTTGGGCACGGTCAGCAAG
ACGGGGCGGAAGGTGGCCATCAAAGAGATCCACCGTTCCATGGAGAGATA
CGAGGGAGAGGTCCGATTGCGCGAGTTGCTGTTCCGCGGAGATGTGGACA
CGGACATTGCGCAACTGGCCAAGATCTTTCAGATTCTAGGTACGCGAAAA
GACGGGAGGGAGTGGCCGGGGAGAAAGGAAACGAGCGAGCGATGTGCAGT
AAGTGTGTTGTTGATGATTACAAACATTAAACGAATGAACAATCCTAGTC
TGACTTCTCTTTATGGAGAGAAACTTTATGCGGTTATGAGAATGAAACAG
CACGTACACACAAACGCTTCGTGAAGATCTCAAACCAGATAACATCCTGC
TCACAGCCAAGGGTGTTCTTAAGATCGCGGATTTCGGCCTCGCGCGTTAT
TTTGGGAACCCCAACGAGACCCTCTCCCCTGGCTTTCAAGTCATTACTCG
GCAGTATCGACCGCCCGAGCTTCTGTTAGGCAGTCGATTGTATGGCCCCG
CAGTGGATATATGGTCGGTGGGTTGTATCATGGTTGTAGAGGACCGCCGC
TTGGTCAAGGCAATTCGGTATGAGGATACCAAAGGCTTCATGCAGCAGCT
ATTGCGGGGCCTCCACTTCCTCCACTCCAACTGGATCTTGCATCGGACGG
AGTCAACTTCTCGGTCCTGCGCGAGATCAAGGTGTTGATGGAACTCAAGC
ACACCAACATCGTGGAGTTACTCGATGTCCGCGTCACGGAGGACGGGCTC
GAACTTGTCTTGGATTACTGCGAGACAAACCTGAAGCGGATGGCAACCGC
CGGCCTTGCATACACCAAAGGCCGGGTGGTGGGCAAGGGTACTTGGGGCA
GTGTCTGCTTGGGCACGGTCAGCAAGACGGGGCGGAAGGTGGCCATCAAA
GAGATCCACCGTTCCATGGAGAGATACGAG back to top
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