jgi.p|Nanoce1779_2|674722, gene_10498 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|674722
Unique Namegene_10498
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_52:92673..98714 +

Link to JBrowse

Properties
Property NameValue
TranscriptId674808
ProteinId674722
Product nameGlycosyltransferase WbsX-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_52supercontigscaffold_52:92673..98714 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL074ncniL074Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674722mRNA_10498-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674722mRNA_10498Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|674722

>mRNA_10498-protein ID=mRNA_10498-protein|Name=jgi.p|Nanoce1779_2|674722|organism=Nannochloropsis oceanica|type=polypeptide|length=589bp
MWRSKCVVAYAFALHFFAFVLIGKMIHLEEGDFFLPAKFLERTYEPTLAV
GQEKKVIAAYFPQFHEFEENNQFWGKGFTDFSNVAKVHQNRYGQAIIRPA
ERMGFYDLMSSSQRRFQGELARKYNIHGFAIYHYWFGTKAIMEKPLEMML
LDGYPDIPFCLTWANEPWTRQWDEKDGSEILLNQTYDRETWKPHFDWLLP
YLEHTNYLKYKGLPIILIYKADDIPDLEQMISQWKTWARNANLTGLHVIQ
INGVGWNGSSSWELQPGMDSLVEFFPNYISASGSTMNNLVSTQKKADSYF
YGASAAFDNSPRYSDPTAGATIYPFHPSHLYFWLRQNLARTEPGGFVFLN
AWNEWGQGSAIEPSIQWGRRWLEAIQRAVSDEQRGHVSKTTPDGYVSSVP
LEENPGMPVSHKATQDRVCIIVRTYKIHATGIYNIHQMLNTLLALNHKNW
RAFIVNTDVTPFEDLHTILDQYKHKGKIEISPLTATRSFADDPNSAYDMT
DRAIEHHCGSSKEFKWLLVTNGDNWYTPDALDFLPNNVDLVLMNFYSRYS
IMSAIVWTNAPDDQACCERLQNYQCMFSTLSESSACLS*
back to top
Synonyms
Publications