jgi.p|Nanoce1779_2|675009, gene_10921 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|675009
Unique Namegene_10921
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_68:64..7591 +

Link to JBrowse

Properties
Property NameValue
TranscriptId675095
ProteinId675009
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_68supercontigscaffold_68:64..7591 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016851magnesium chelatase activity
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL089ncniL089Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G00200NO16G00200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675009mRNA_10921-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675009mRNA_10921Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|675009

>mRNA_10921-protein ID=mRNA_10921-protein|Name=jgi.p|Nanoce1779_2|675009|organism=Nannochloropsis oceanica|type=polypeptide|length=740bp
MDSKDTTDAERQYWTHEGVLEEKDWSDSERNHWAHFETMQSGENTLEYQH
WANYEVWQEEYKSLSAADQKKFTDWRYFWAVNGDGVTVGSKGSDLKTSLR
TEFPLGLVEGQENIKTALLLTAINPDIQGVIISGEHGVGKTVMARGLKNL
LPPIEVIKGSRFNLDPEDPDTADTFIKERLKATGRKWADLETEIVPAPFV
EDRLLGSIDLEESIRKGKAAFQPGLLADAHRGVLYLDDINLMDTQILSII
FNCLSQGYVQVGGVALSADAYPLTDEQRQAAVEKILAWDSGTMSQEERQM
YLDQEEELSKEEGGREGEGGGEGGGREGRTRIIFAREELEEVKFTRSQIK
YLVRGGDPEGGAPGVTTLWRTGGCEGHRAEIFASEVAKAHAALNDRRRPS
ADDLRLGMKLAMITRSKFVNNPTEEMMEQPPPPPPPPPQQPPPEEDTEEM
QEKQEDEEDQEDQEEEEDEEDKEPPPSPRPGRRARGVHVRRRGWVPMDSE
LLSFSMKQRQKPMMPRGRTWKVAIDASLRASAPYQKGSMALNRMTAAKGA
ALSLLNEAYKSRDKICLITFQGDRAQVLLPPTRSIAMAKNRLETMPCGGG
SPLAHAPAVDWLPTYTTARANVPLSKSMDVMPIGDPLESVDDGGGEKKKD
KEAQKKEREEIKDEVLNTARALGVLPGFSLLMVDTENKFVSTGVAKEIAA
AAFGKYHFIPKATDRAVAEVASLAIADIKQSKNNVKSRR*
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Synonyms
Publications