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Properties
| Property Name | Value |
|---|
| TranscriptId | 585610 |
| Track | FilteredModels2 |
| ProteinId | 585524 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:164438..166083 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3839 ID=mRNA_3839|Name=jgi.p|Nanoce1779_2|585524|organism=Nannochloropsis oceanica|type=mRNA|length=1355bp
ATATATATATATATATATATATATATATGGTTGGTAGGCATCTCCCGTCT
CCCCGGTGACAGCTTCTTCTCCTGCTGCTGCTACCGCCGCTGATATGCGA
TGGTGTGTGAAAGCACTTGTGTGAAGAGTGTGTGTGTGTATGCGTATGCG
TGTATGTGTGCATACATATATATATATATGTGTGTGTATGTGTGTGTATG
TGTGTGTGTGTGCGTATCTGTGTGTGTATGTGTGCGTACGTTCAGATGTT
TGTTCCTCCGCTGGCTGTTGCTGCTCCTGCGGCTGCTGCTGGCGCTGCTG
CGCTCCATTTTCCCCTTATTTTTATTTTCTTATTCGTACTCGACGACTAC
TACCACTTGTTCTTCTTCTTAGCCTTCCCGTGCGTAGAATTCACTACGAG
ATTGAATTTCTCTGGACAAGTTGCTGCCCCCCCTCCACCTTTCTCCCTCT
GCCCCTCTCCGTCATGCTCATACATCTCCCTACCCCCTTCCTTCCTCCTC
CTCTCCTCCTCCCCTCCTCCGCCTTTACACGCCAGAAGGAATAGGCGTAG
TGCATGCTTTCCACCGTCTCCCTCCTCCCTTGACGCCCTCTCTAGAAATC
CTCTAGCAAGTCCAAATCGTCGACTGCCGGACCTAACGATGTCACATCCA
CTCCCTCACTCCTGCCCTCCCTCCCTTCCTCAATCTCCTCCTCCACCAGC
GCCGCGCTGGTCATGAGCGTTTGAATATCCTGCAATAGCAACCCCTGCAG
CTGCCTCTCAAACTCTTCTTCCTCTTTCTGCTCTTGCTCCTGCGCCCGGT
CCTCTTCCACTCTCCTCCTCCTCCCTCCCTCCAGCTCTCGCAAGAACGCC
GCCTCTCCCTCCTTTTCCTTTGTCGCTCGTTTAATCGCCACCAATTTATC
CTCTTCCTCACCCAATCGTCCCGCCGCCCTTTCGACCTCCCATTCATCCT
CCTCGTCCTCGTCGTCGGAAAAGGAGGGGAGGTCCGCGAGGAGGGAGGGA
GGGAGAGAGGGCGGGGCGGCGACGGAAGATGAAGACAAAGCAGACAACGA
CGATTTGATGGTGGATTTGGCATAGGAGGATGAAGAAGAGGAGGAACTCT
TTGTGGAGGACGAGAAGGTACTGCTCCGGCTTTTGCCTGCTCCCACCCTG
TTGGTAATCTCGCCGAGGGCACGGCGAGGACGAGGCCTGTTTTGGATGGG
TTGCAGGCGGGAGAATAAGGACAGTAACAGGGATTGAGATCATAATACTG
CCACTAATAGCCCACTCTACCCTCTTCCTTTCTTCTTCAGAGCATGAAAG
CACGAATGCACGCCTTCGTTACGTAATGGTCCTAGCTCTCCTTCCTCCCT
CCCCC back to topprotein sequence of jgi.p|Nanoce1779_2|585524 >mRNA_3839-protein ID=mRNA_3839-protein|Name=jgi.p|Nanoce1779_2|585524|organism=Nannochloropsis oceanica|type=polypeptide|length=173bp
MCVCVRICVCMCAYVQMFVPPLAVAAPAAAAGAAALHFPLIFIFLFVLDD
YYHLFFFLAFPCVEFTTRLNFSGQVAAPPPPFSLCPSPSCSYISLPPSFL
LLSSSPPPPLHARRNRRSACFPPSPSSLDALSRNPLASPNRRLPDLTMSH
PLPHSCPPSLPQSPPPPAPRWS* back to topmRNA from alignment at scaffold_8:164438..166083- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3839 ID=mRNA_3839|Name=jgi.p|Nanoce1779_2|585524|organism=Nannochloropsis oceanica|type=mRNA|length=1646bp|location=Sequence derived from alignment at scaffold_8:164438..166083- (Nannochloropsis oceanica)
ATATATATATATATATATATATATATATGGTTGGTAGGCATCTCCCGTCT
CCCCGGTGACAGCTTCTTCTCCTGCTGCTGCTACCGCCGCTGATATGCGA
TGGTGTGTGAAAGCACTTGTGTGAAGAGTGTGTGTGTGTATGCGTATGCG
TGTATGTGTGCATACATATATATATATATGTGTGTGTATGTGTGTGTATG
TGTGTGTGTGTGCGTATCTGTGTGTGTATGTGTGCGTACGTTCAGATGTT
TGTTCCTCCGCTGGCTGTTGCTGCTCCTGCGGCTGCTGCTGGCGCTGCTG
CGCTCCATTTTCCCCTTATTTTTATTTTCTTATTCGTACTCGACGACTAC
TACCACTTGTTCTTCTTCTTAGCCTTCCCGTGCGTAGAATTCACTACGAG
ATTGAATTTCTCTGGACAAGTTGCTGCCCCCCCTCCACCTTTCTCCCTCT
GCCCCTCTCCGTCATGCTCATACATCTCCCTACCCCCTTCCTTCCTCCTC
CTCTCCTCCTCCCCTCCTCCGCCTTTACACGCCAGAAGGAATAGGCGTAG
TGCATGCTTTCCACCGTCTCCCTCCTCCCTTGACGCCCTCTCTAGAAATC
CTCTAGCAAGTCCAAATCGTCGACTGCCGGACCTAACGATGTCACATCCA
CTCCCTCACTCCTGCCCTCCCTCCCTTCCTCAATCTCCTCCTCCACCAGC
GCCGCGCTGGTCATGAGCGCTGTTGTGTAAATTTACAGAGGGAGAGAGAG
AGGGAGGGAGGTAGAGAGGGAGGGAGGTAGAGAGGGAGGGAGGTAGAGAG
GGAGGGAGGTAGAGAGGGAGGGAGGTAGAGAGGGAGGGAGGTAGAGAGGG
AGGGAGGTAGAGAGGGAGGGAGGGAAAAGGCAAGAGGTCAAGTTGTGGTA
GGTGACGGGGAAAGACAACATGGAGGATTACTTTTGATTGACATGAAGAT
AGAAGCATAGAGCACCCCTCCCTCCGTCCCTCTCTTCCTTTCACCTTTCT
CCGCACTCACTTTGAATATCCTGCAATAGCAACCCCTGCAGCTGCCTCTC
AAACTCTTCTTCCTCTTTCTGCTCTTGCTCCTGCGCCCGGTCCTCTTCCA
CTCTCCTCCTCCTCCCTCCCTCCAGCTCTCGCAAGAACGCCGCCTCTCCC
TCCTTTTCCTTTGTCGCTCGTTTAATCGCCACCAATTTATCCTCTTCCTC
ACCCAATCGTCCCGCCGCCCTTTCGACCTCCCATTCATCCTCCTCGTCCT
CGTCGTCGGAAAAGGAGGGGAGGTCCGCGAGGAGGGAGGGAGGGAGAGAG
GGCGGGGCGGCGACGGAAGATGAAGACAAAGCAGACAACGACGATTTGAT
GGTGGATTTGGCATAGGAGGATGAAGAAGAGGAGGAACTCTTTGTGGAGG
ACGAGAAGGTACTGCTCCGGCTTTTGCCTGCTCCCACCCTGTTGGTAATC
TCGCCGAGGGCACGGCGAGGACGAGGCCTGTTTTGGATGGGTTGCAGGCG
GGAGAATAAGGACAGTAACAGGGATTGAGATCATAATACTGCCACTAATA
GCCCACTCTACCCTCTTCCTTTCTTCTTCAGAGCATGAAAGCACGAATGC
ACGCCTTCGTTACGTAATGGTCCTAGCTCTCCTTCCTCCCTCCCCC back to topCoding sequence (CDS) from alignment at scaffold_8:164438..166083- >mRNA_3839 ID=mRNA_3839|Name=jgi.p|Nanoce1779_2|585524|organism=Nannochloropsis oceanica|type=CDS|length=519bp|location=Sequence derived from alignment at scaffold_8:164438..166083- (Nannochloropsis oceanica)
ATGTGTGTGTGTGTGCGTATCTGTGTGTGTATGTGTGCGTACGTTCAGAT
GTTTGTTCCTCCGCTGGCTGTTGCTGCTCCTGCGGCTGCTGCTGGCGCTG
CTGCGCTCCATTTTCCCCTTATTTTTATTTTCTTATTCGTACTCGACGAC
TACTACCACTTGTTCTTCTTCTTAGCCTTCCCGTGCGTAGAATTCACTAC
GAGATTGAATTTCTCTGGACAAGTTGCTGCCCCCCCTCCACCTTTCTCCC
TCTGCCCCTCTCCGTCATGCTCATACATCTCCCTACCCCCTTCCTTCCTC
CTCCTCTCCTCCTCCCCTCCTCCGCCTTTACACGCCAGAAGGAATAGGCG
TAGTGCATGCTTTCCACCGTCTCCCTCCTCCCTTGACGCCCTCTCTAGAA
ATCCTCTAGCAAGTCCAAATCGTCGACTGCCGGACCTAACGATGTCACAT
CCACTCCCTCACTCCTGCCCTCCCTCCCTTCCTCAATCTCCTCCTCCACC
AGCGCCGCGCTGGTCATGA back to top
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