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Properties
Property Name | Value |
TranscriptId | 622312 |
Track | FilteredModels2 |
ProteinId | 622226 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_1 | supercontig | scaffold_1:1040436..1042144 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1597 ID=mRNA_1597|Name=jgi.p|Nanoce1779_2|622226|organism=Nannochloropsis oceanica|type=mRNA|length=1272bp ATGTCGTCACTATGCACTGCCATCGCGACGGCAGGCGGCGACGGAGGTTT AACCAGTCATGAAAAAGAGAGCCTACTCAATCCCTTGCTGAGCTCAGTCG CCGTGAGCAAGACCATTGAGATTCACGCCATGACCAAGAATATGGAGGCC CGGGGTGAGACTGTCGTGTCATTGTGCGTTGGAGAACCAGATTTCCCCCC ACCTGCCGAGGTAGTCGAAGCCACCATCCAAGCCGTCCGCGAAGGCCACA CCCGCTACACAGCTGTCACAGGAGAAGCCGCCCTGAGGGCAGCTATCTGT AAAGATTTAGAAACTCGAAAGGGCATCAAATATACCCCTGAAGAGATTAT TGTTGGGAATGGAGCCAAGCAAGAGGTGTATCAAGCCCTGCTTGCTTTGT GTCGACCGGGGGATGAAGTCATTATACCGGCCCCATACTGGCCTAGCTAC CCAGAGATTGTCAAGTTAACGGGAGCGACACCGGTCATCTTGGGGACCAA GGCGGCGGATGGATTTTTGGTAGACCCTGAGGCGCTGTCAGCAGCGATCA CGCCCAAGACTCGAATGTTCATCTTCTGTAATCCCAGCAATCCAACAGGG GCAGTGCACCCCCCCTCCGTCGTGGACGCAGTGGGAGCCATCCTTAAACG TCCTCATGCCAAGCATGTTTGGGCTTTGTCTGACGAGATATACGAGCGGA TCGTCTACGACACACCACACAAGAGCCTCGCAGCCGTCTCTGGCCTGCGT GATCGTGTATTGTTAATAAATGGATTTTCGAAAGCCTTTGCCATGACGGG CTATCGGCTTGGATACCTTGCTGGTCCTCTGGCAGTCATCAAGGGATGTA CCACCCTCCAGTCGCAAATCACATCGTGCGCCAGCAGCATTGCCCAACGA GCGGGCACCGCGGCGTTAGGTCTTCCGGAAGCAGCGATGGTACCCTCGGT GGCGATGATGCGTAAGAAGCGGGATCAAGTCATGGCGGCCTTGGCCAAAA TCCCGCGGGTGACGTGCTCGATTCCGCAAGGGGCCTTTTATGTCCTGCCT GACATATCGGCATACTACCACAAGACTACACCCGCGGGAAAAATCATTCG GGATGGGCACGAGCTGTGTATGTATTTATTGAAAGAGTACAAGGTGGCAT TGGTCCCTGGGGATTCATTCGGGGACTCATCTACCATCCGCATTTCTTAT GCGACGTCGGAGAAAGAGCTGGACATAGCTCTGACCCGATTGGGCGACTG CTTGGCCTCGCTTTCTCAGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|622226 >mRNA_1597-protein ID=mRNA_1597-protein|Name=jgi.p|Nanoce1779_2|622226|organism=Nannochloropsis oceanica|type=polypeptide|length=424bp MSSLCTAIATAGGDGGLTSHEKESLLNPLLSSVAVSKTIEIHAMTKNMEA RGETVVSLCVGEPDFPPPAEVVEATIQAVREGHTRYTAVTGEAALRAAIC KDLETRKGIKYTPEEIIVGNGAKQEVYQALLALCRPGDEVIIPAPYWPSY PEIVKLTGATPVILGTKAADGFLVDPEALSAAITPKTRMFIFCNPSNPTG AVHPPSVVDAVGAILKRPHAKHVWALSDEIYERIVYDTPHKSLAAVSGLR DRVLLINGFSKAFAMTGYRLGYLAGPLAVIKGCTTLQSQITSCASSIAQR AGTAALGLPEAAMVPSVAMMRKKRDQVMAALAKIPRVTCSIPQGAFYVLP DISAYYHKTTPAGKIIRDGHELCMYLLKEYKVALVPGDSFGDSSTIRISY ATSEKELDIALTRLGDCLASLSQ* back to topmRNA from alignment at scaffold_1:1040436..1042144- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1597 ID=mRNA_1597|Name=jgi.p|Nanoce1779_2|622226|organism=Nannochloropsis oceanica|type=mRNA|length=1709bp|location=Sequence derived from alignment at scaffold_1:1040436..1042144- (Nannochloropsis oceanica) ATGTCGTCACTATGCACTGCCATCGCGACGGCAGGCGGCGACGGAGGTTT
AACCAGTCATGAAAAAGAGAGCCTACTCAATCCCTTGCTGAGCTCAGTCG
CCGTGAGCAAGACCATTGAGATTCACGCCATGACCAAGAATATGGAGGCC
CGGGGTGAGACTGTCGTGTCATTGTGCGTTGGAGAACCAGATTTCCCCCC
ACCTGCCGGTAGGTTTGAAGGACCTCGATCCTGAGAGCTAGATGGAAGCT
GCAGTCAGAGCAGACACCATATGTTTCCTATACACCCTCCTGGCTAGAAA
GTTTGTCCATGTTTTCAGGAGCGTGGTCACGCAAACGTTTTTCAAGTTAT
TAACATGTATTTATCTTTACTGTGTACTCACAGACCTGTCGTCTAAATTC
CTGGCTCACCCACACCATACAGAGGTAGTCGAAGCCACCATCCAAGCCGT
CCGCGAAGGCCACACCCGCTACACAGCTGTCACAGGAGAAGCCGCCCTGA
GGGCAGCTATCTGTAAAGATTTAGAAACTCGAAAGGGCATCAAATATACC
CCTGAAGAGATTATTGTTGGGAATGGAGCCAAGCAAGAGGTGTATCAAGC
CCTGCTTGCTTTGTGTCGACCGGGGGATGAAGTCATTATACCGGCCCCAT
ACTGGCCTAGCTACCCAGAGATTGTCAAGTTAACGGGAGCGACACCGGTC
ATCTTGGGGACCAAGGCGGCGGATGGATTTTTGGTAGACCCTGAGGCGCT
GTCAGCAGCGATCACGCCCAAGACTCGAATGGTAAGTGGGAGAGAGAGGA
GAGGGTGAGGGGAGGAGGAAAAGGGTCGGCACGCTCGCTGTGGAATGCGA
CTGGTTTTCGCACTTAATGGTGAGATTCTAAATTGCCGGGTCATCCTCAA
AACGATTGGCGACAGGGCTATCTTCTTCTTTCCCATGCACCCATGCACCC
TCTGCCGCTGTCTTAACACATACTCTCCTCCTTTCCTCCCTGCCCACCAT
ACAGTTCATCTTCTGTAATCCCAGCAATCCAACAGGGGCAGTGCACCCCC
CCTCCGTCGTGGACGCAGTGGGAGCCATCCTTAAACGTCCTCATGCCAAG
CATGTTTGGGCTTTGTCTGACGAGATATACGAGCGGATCGTCTACGACAC
ACCACACAAGAGCCTCGCAGCCGTCTCTGGCCTGCGTGATCGTGTATTGT
TAATAAATGGATTTTCGAAAGCCTTTGCCATGACGGGCTATCGGCTTGGA
TACCTTGCTGGTCCTCTGGCAGTCATCAAGGGATGTACCACCCTCCAGTC
GCAAATCACATCGTGCGCCAGCAGCATTGCCCAACGAGCGGGCACCGCGG
CGTTAGGTCTTCCGGAAGCAGCGATGGTACCCTCGGTGGCGATGATGCGT
AAGAAGCGGGATCAAGTCATGGCGGCCTTGGCCAAAATCCCGCGGGTGAC
GTGCTCGATTCCGCAAGGGGCCTTTTATGTCCTGCCTGACATATCGGCAT
ACTACCACAAGACTACACCCGCGGGAAAAATCATTCGGGATGGGCACGAG
CTGTGTATGTATTTATTGAAAGAGTACAAGGTGGCATTGGTCCCTGGGGA
TTCATTCGGGGACTCATCTACCATCCGCATTTCTTATGCGACGTCGGAGA
AAGAGCTGGACATAGCTCTGACCCGATTGGGCGACTGCTTGGCCTCGCTT
TCTCAGTAG back to topCoding sequence (CDS) from alignment at scaffold_1:1040436..1042144- >mRNA_1597 ID=mRNA_1597|Name=jgi.p|Nanoce1779_2|622226|organism=Nannochloropsis oceanica|type=CDS|length=3816bp|location=Sequence derived from alignment at scaffold_1:1040436..1042144- (Nannochloropsis oceanica) TTCATCTTCTGTAATCCCAGCAATCCAACAGGGGCAGTGCACCCCCCCTC CGTCGTGGACGCAGTGGGAGCCATCCTTAAACGTCCTCATGCCAAGCATG TTTGGGCTTTGTCTGACGAGATATACGAGCGGATCGTCTACGACACACCA CACAAGAGCCTCGCAGCCGTCTCTGGCCTGCGTGATCGTGTATTGTTAAT AAATGGATTTTCGAAAGCCTTTGCCATGACGGGCTATCGGCTTGGATACC TTGCTGGTCCTCTGGCAGTCATCAAGGGATGTACCACCCTCCAGTCGCAA ATCACATCGTGCGCCAGCAGCATTGCCCAACGAGCGGGCACCGCGGCGTT AGGTCTTCCGGAAGCAGCGATGGTACCCTCGGTGGCGATGATGCGTAAGA AGCGGGATCAAGTCATGGCGGCCTTGGCCAAAATCCCGCGGGTGACGTGC TCGATTCCGCAAGGGGCCTTTTATGTCCTGCCTGACATATCGGCATACTA CCACAAGACTACACCCGCGGGAAAAATCATTCGGGATGGGCACGAGCTGT GTATGTATTTATTGAAAGAGTACAAGGTGGCATTGGTCCCTGGGGATTCA TTCGGGGACTCATCTACCATCCGCATTTCTTATGCGACGTCGGAGAAAGA GCTGGACATAGCTCTGACCCGATTGGGCGACTGCTTGGCCTCGCTTTCTC AGTAGAGGTAGTCGAAGCCACCATCCAAGCCGTCCGCGAAGGCCACACCC GCTACACAGCTGTCACAGGAGAAGCCGCCCTGAGGGCAGCTATCTGTAAA GATTTAGAAACTCGAAAGGGCATCAAATATACCCCTGAAGAGATTATTGT TGGGAATGGAGCCAAGCAAGAGGTGTATCAAGCCCTGCTTGCTTTGTGTC GACCGGGGGATGAAGTCATTATACCGGCCCCATACTGGCCTAGCTACCCA GAGATTGTCAAGTTAACGGGAGCGACACCGGTCATCTTGGGGACCAAGGC GGCGGATGGATTTTTGGTAGACCCTGAGGCGCTGTCAGCAGCGATCACGC CCAAGACTCGAATGATGTCGTCACTATGCACTGCCATCGCGACGGCAGGC GGCGACGGAGGTTTAACCAGTCATGAAAAAGAGAGCCTACTCAATCCCTT GCTGAGCTCAGTCGCCGTGAGCAAGACCATTGAGATTCACGCCATGACCA AGAATATGGAGGCCCGGGGTGAGACTGTCGTGTCATTGTGCGTTGGAGAA CCAGATTTCCCCCCACCTGCCGTTCATCTTCTGTAATCCCAGCAATCCAA CAGGGGCAGTGCACCCCCCCTCCGTCGTGGACGCAGTGGGAGCCATCCTT AAACGTCCTCATGCCAAGCATGTTTGGGCTTTGTCTGACGAGATATACGA GCGGATCGTCTACGACACACCACACAAGAGCCTCGCAGCCGTCTCTGGCC TGCGTGATCGTGTATTGTTAATAAATGGATTTTCGAAAGCCTTTGCCATG ACGGGCTATCGGCTTGGATACCTTGCTGGTCCTCTGGCAGTCATCAAGGG ATGTACCACCCTCCAGTCGCAAATCACATCGTGCGCCAGCAGCATTGCCC AACGAGCGGGCACCGCGGCGTTAGGTCTTCCGGAAGCAGCGATGGTACCC TCGGTGGCGATGATGCGTAAGAAGCGGGATCAAGTCATGGCGGCCTTGGC CAAAATCCCGCGGGTGACGTGCTCGATTCCGCAAGGGGCCTTTTATGTCC TGCCTGACATATCGGCATACTACCACAAGACTACACCCGCGGGAAAAATC ATTCGGGATGGGCACGAGCTGTGTATGTATTTATTGAAAGAGTACAAGGT GGCATTGGTCCCTGGGGATTCATTCGGGGACTCATCTACCATCCGCATTT CTTATGCGACGTCGGAGAAAGAGCTGGACATAGCTCTGACCCGATTGGGC GACTGCTTGGCCTCGCTTTCTCAGTAGAGGTAGTCGAAGCCACCATCCAA GCCGTCCGCGAAGGCCACACCCGCTACACAGCTGTCACAGGAGAAGCCGC CCTGAGGGCAGCTATCTGTAAAGATTTAGAAACTCGAAAGGGCATCAAAT ATACCCCTGAAGAGATTATTGTTGGGAATGGAGCCAAGCAAGAGGTGTAT CAAGCCCTGCTTGCTTTGTGTCGACCGGGGGATGAAGTCATTATACCGGC CCCATACTGGCCTAGCTACCCAGAGATTGTCAAGTTAACGGGAGCGACAC CGGTCATCTTGGGGACCAAGGCGGCGGATGGATTTTTGGTAGACCCTGAG GCGCTGTCAGCAGCGATCACGCCCAAGACTCGAATGATGTCGTCACTATG CACTGCCATCGCGACGGCAGGCGGCGACGGAGGTTTAACCAGTCATGAAA AAGAGAGCCTACTCAATCCCTTGCTGAGCTCAGTCGCCGTGAGCAAGACC ATTGAGATTCACGCCATGACCAAGAATATGGAGGCCCGGGGTGAGACTGT CGTGTCATTGTGCGTTGGAGAACCAGATTTCCCCCCACCTGCCGTTCATC TTCTGTAATCCCAGCAATCCAACAGGGGCAGTGCACCCCCCCTCCGTCGT GGACGCAGTGGGAGCCATCCTTAAACGTCCTCATGCCAAGCATGTTTGGG CTTTGTCTGACGAGATATACGAGCGGATCGTCTACGACACACCACACAAG AGCCTCGCAGCCGTCTCTGGCCTGCGTGATCGTGTATTGTTAATAAATGG ATTTTCGAAAGCCTTTGCCATGACGGGCTATCGGCTTGGATACCTTGCTG GTCCTCTGGCAGTCATCAAGGGATGTACCACCCTCCAGTCGCAAATCACA TCGTGCGCCAGCAGCATTGCCCAACGAGCGGGCACCGCGGCGTTAGGTCT TCCGGAAGCAGCGATGGTACCCTCGGTGGCGATGATGCGTAAGAAGCGGG ATCAAGTCATGGCGGCCTTGGCCAAAATCCCGCGGGTGACGTGCTCGATT CCGCAAGGGGCCTTTTATGTCCTGCCTGACATATCGGCATACTACCACAA GACTACACCCGCGGGAAAAATCATTCGGGATGGGCACGAGCTGTGTATGT ATTTATTGAAAGAGTACAAGGTGGCATTGGTCCCTGGGGATTCATTCGGG GACTCATCTACCATCCGCATTTCTTATGCGACGTCGGAGAAAGAGCTGGA CATAGCTCTGACCCGATTGGGCGACTGCTTGGCCTCGCTTTCTCAGTAGA GGTAGTCGAAGCCACCATCCAAGCCGTCCGCGAAGGCCACACCCGCTACA CAGCTGTCACAGGAGAAGCCGCCCTGAGGGCAGCTATCTGTAAAGATTTA GAAACTCGAAAGGGCATCAAATATACCCCTGAAGAGATTATTGTTGGGAA TGGAGCCAAGCAAGAGGTGTATCAAGCCCTGCTTGCTTTGTGTCGACCGG GGGATGAAGTCATTATACCGGCCCCATACTGGCCTAGCTACCCAGAGATT GTCAAGTTAACGGGAGCGACACCGGTCATCTTGGGGACCAAGGCGGCGGA TGGATTTTTGGTAGACCCTGAGGCGCTGTCAGCAGCGATCACGCCCAAGA CTCGAATGATGTCGTCACTATGCACTGCCATCGCGACGGCAGGCGGCGAC GGAGGTTTAACCAGTCATGAAAAAGAGAGCCTACTCAATCCCTTGCTGAG CTCAGTCGCCGTGAGCAAGACCATTGAGATTCACGCCATGACCAAGAATA TGGAGGCCCGGGGTGAGACTGTCGTGTCATTGTGCGTTGGAGAACCAGAT TTCCCCCCACCTGCCG back to top
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