jgi.p|Nanoce1779_2|631024, mRNA_5385 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|631024
Unique Name	mRNA_5385
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5183
Alignment location	scaffold_13:312004..317549 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	631110
Track	FilteredModels2
ProteinId	631024

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_13	supercontig	scaffold_13:312004..317549 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|631024	gene_5385	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|631024	mRNA_5385-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_5385	CDS_5385	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_13:312004..317549+
coding sequence from alignment at scaffold_13:312004..317549+

mRNA sequence

>mRNA_5385 ID=mRNA_5385|Name=jgi.p|Nanoce1779_2|631024|organism=Nannochloropsis oceanica|type=mRNA|length=5183bp
CGGTGTCCACCCTTCCTCCAGACCTTCGAATGCCGCCATCGCGGCTGCAG
CGGCGGCAGCCGCGCATCAGGGGGAGAGAGTGAGGCAAAGCATGTTAAGA
GGAGGTGGAATGATGTTGGACGAGGACACGGGGATGTGGAATTCAGTCTC
CTTTGGCGGCACGAAAGGGTTGATGAAGAGTGATGGGTCCAAGGTGATGG
TGGGGATAGATCCATTGCACCAGAGGCCGTCATTTCAGGATATGGGTCAA
TTTGAGAAGGAGACAGAGGAACGAGGGGCGGCAAACGCAGTAGGGGTGTT
GGTTTCGATAGGGTATGCCTTGGTAATGCCGGCGGTCAGTGTCTTAAAAA
GAACCCGCCGCTTCGTCCGCGCAAACCAAATACGGGTCCTCTCCTCCCTG
GTTATCCTCGTCATACTCACCCTCTGCATCATCCTCGCCGCCGTCTACTT
TCCGTCCCATACGGGAAAGCACCATATCCGCGGCGACCCCTGGGACAACA
AGCCTTTCATCGCCCCCCACGGTCATTCAGGCACCATGCTCGGCGCGGCC
GAAGGCGGTCAATACCGGAACCTCTTCTCGGAAATGCTACACAAATCCGA
AGCAGAAATCGACAAGAAGCTCGGAGACACCTGGAGGTTGCTTTTCGAGG
GGAACCCCATCAACGAAGCCATCTATTTCCCTGTGGGTACCACGCCCGAA
GGAGATAAATTGGGGTACATGACCAACACGGAGAGTGGGTGGGTGACGAG
CGAGGCCATGTCGTATGGGATGATGGCGGCGGTGCAGTTTGAAAAGAAGG
AGGTCTTCGACGCCTTGTGGGCCTGGTCGACACGCTACATGAAACACATC
ACTGGCAAGTACAAGGACTTTTTCGCGTGGCAGTGCTCACTAGCTGGACA
GAAGATGGATCCAACCCCAGCACCGGATGGGGAGGAGTGGTTCGCCACAG
CTCTGATCTTTGCGCACAATAGGTGGTCGTCTACAGGGAGGTATAATTAC
GAGAAGGACGCACTGAATCTACTCGCTGCCATGGCAGACCCTCAGCGAGG
CATGTTCAGTGAGAAAGGGGAAGTGACGCTGAATCCGGTGCAGCCTACCA
TTACTAATCCGTCTTACCACCTTCCTCAGTTTTATGAGGTCTGGGCGCGT
TTTTTGACCGATAGAGGACAAGTAAAAGAGGCTGCATTTTACCTGATGGC
AGCGAGCAAGAGCAGGATTCTGTGGAGAAAGGCCGCAAACCGACACACAG
GGCTAGCAGCCGATTACACTGATTTTGATGGGGTGGGGGTAAAGGACCTG
TTGGGGCACTCCAACTTTCAATGGGACGCGTGGAGGGTGGTGGCTAATCT
AGCTGTGGACTGGTCGTGGTGGAGGCGCGATCCCTGGCAAGAACGGGAGG
CGGACACATTACAAGCGTTCTTGTTCTCGAAGGGAATTCATGACTACCCA
TCTACGTACTCGTTGAATGGGACGGCAATGTCGGAGAGTCACTCCGTGGG
GCTAGTGGCAGTGAATGCCGTGGCTTCCTTGGCGGCGACTGATAAGAATG
TGGCCACGGCTTTCGTGGCCGAGCTTTGGAACGCAGCGATTCCGGCGAAT
AAGTGGAGGTATTACAATGGTATTTTGGCATTTCTCTCTTTGTTGCAGGT
ATCGGGCAGGTATCGGAGTTATTATTAGCTTAAGAAAGTGATGTGGGTAA
TTTGTGAGAAGAAAATAGTGAGACACGGAAAGAGAATTAAACTCTTGGTT
AAAAACTTACACGCTCAACTGGAGGGAGGGATGATATGGAAAACACTCAG
GTTGGAAGAGAGTGAAGGACAAGTTCACATGGCGATGGGTATAATGGTGT
CAATAAGCGATAGAACAAACAACAGATGGCGCGAGAGCTAGATTTCTGGC
TTGATTTTCAAAAGACAGACACCGCCAGTGATTATCATGGTGGCGCTGAG
AAATTTTAGTTTCCAAGGCATGTGATGTAGATGAGAGTGCGTGAGGGCCA
CGCGCGCCCATGTGTGCGTTTGTCCGCATCTTCCCTGTATGGTATAATGT
AACAGAATGTCCTAAAACAGTGGGAAGGGGGAGAGACGATGAGAATGGTG
TTTTGGTAAAATAGAGAGGGATACGGGGATGGAGACGAATCTGGAGCGGA
AAGGAGAACGAGGGCATGCCGATGTGAACATGCGTGTGAAACAAACAAGG
AACAAACTCAAAGAACATGCGAATAAGGGAAGAGACGATGTAGGGAGGGA
TGGTAATTAGGTAAGACAAGAAATTCATTGACAAAAAGCGATTAAAGGCA
AACTTAGAGATTGGGCGTCGATTATGTAGATGTGTGAGCAGAGAGGAAGA
GATGATGGTAGCAGCAAAGCTGAACCAGCCGTCCTGTCCATCTCTTTCTC
GCTTTCCCGACTTGCCAGCTGCTAGCCAGTCCAATGCTGTCTCTTTATTG
GCAGTAAGCCATACATGTGAGGAGATGTGCATAAATATAGAAGAAAAGCG
GCGAGAAGTAGGGGGAAAGAAACATCATAACCCTCGTACAGCAAGAACGA
TAACAAGGGGGGGCACTGCGACAAGACCATAAAGCAGCAGAAAAGAGAGA
AGAAGAGTTGCAGCAGAATCCTCATCACCATCAGCCAAACCAGGGGGTGG
AGCCATCGAGGGAAAAGAAAGAAACAACATGTGTGAGATCCCCACCACGG
TGAGGAGGAAGTAACCAGTCAGACACTGCTCGTCGTGCTTTAGATTCAGT
ACGCGTGCAAGTTCCACACATATCAACAAACAACCTTGTTGTCGTATTTT
GAGTTGTAACAAAATTGCACGTACAGCATTGCCAAATCAGATGGCCAAGC
TTCCTTTCCCGATTGATTCAAGTAATTGGGTACCAATAGGAAACGCACAG
CACATCGCTTCACAAATGTTGTTCTTTCCTCACCTTTGCCTTCACTCGTC
TCTCCACCTTTCTTTTCAAACCCTTCCAATCGCACAACGGAGGCCCCCTG
CTGCAATGAAGGGGCATCTTCGCATTCCTTTCCTGCTTATTTCCCATTAT
TCAAGAGGGGCATGTCAAGAGGGGCATACACGCTAGGCAGTGTATAGACA
TTGTGGTGAGCATGGCTAAGCAAAATACCGCGCTATTTTGTTTTTACAAG
ATGTACTTAGAGATATCAGACTCGACCAGGAGGTCATTGACGCGGCTCTG
AACGAGGTCCTTGTCCACGGTTATGACGGCTCCTTCGGCCTTGTCCGAGG
CCTCGAAAGAAATCTCCTCCACAATACGCTCCAGCACTGTGTGCAGGCGG
CGCGCTCCAATGTTCTCCACAGTCTTGTTGACCAAGGCAGCAACCCGCGC
GATCTCCCGCACAGCCTCGTCCGTGAATTCCAACGCTACCTTTTCGGTAG
AGAGTAACGCTACCTGCTGGGCGATGAGGTTGGTGATGGGCTCCGTCAGT
ATACGGTACATGTCATCCTCCGTCAGGCCCTTAAGCTCCACCCGGATGGG
CAGCCTACCCTGCAGCTCGGCCAGCAGGTCGGCGGGCTTGCACTGGTGAA
AGGCACCCGATGATATGAAGAGGATGTAGTCCGTGTTCACATTCCCGTGC
TTAGTGCTGATGGTACAACCCTCGATTAGCGGAAGGAGGTCCCGTTGGAC
GCCCTCCGCAGAGGCGTCCGCGCCCCGGTAGTCGCTGGGGTTGCAGATCT
TGTCGATCTCGTCGATGAAGACAATGCCGCTCTCCTCCACTGACTGAATG
GCCTCCCGCGTAACGTCCGACATGTCCACAAGCTTCTCCATTTCCACCTC
CAGTAGCAGCGGCATTGCCTCCTTGACCAGGATCTTTCTTTTCTCCATAG
GACGTTTGGGCATAATGGCGCGCGAGAACTTGCCGATAAAGTCCGCCATG
GAAACGTTCGGGTTGCTCTCAGCGAATGCCCCGCTGCCCGGCCCTGCACC
CGCTTTGTCGAATACACCCCCTGCACTGCCCCGGTCCGCAGGAACCTCCA
CGTCGACGAGCCGGTCATTAAGGCTGCCCTTGCGCAGCAGGTCACGGAAA
GTCTCCTTCGCGTCGTCTCGCGCATAGGGGCCCGTCAGTATCTGGAGGAT
CTTTTCCTCCACCGCCTTCTGGGCCTCCGCCTTGATGGCCTCACTACGCC
GCTTTTTTGTCATGTTCACCGAGATCTCCACCAAATCGCGGATGATCTGG
TCCACGTCGCGGCCGTGGAAGCCAACTTCCGTGAACTTGGTGGCCTCCAC
TTTGATGAAAGGCGCGTCCGAGAGTTTCGCAATGCGCCGTGCAATTTCCG
TCTTGCCACAGCCCGTGGGACCAATCATCAGGATATTCTTAGGGATGATC
TCCGTCCGCAGGTCCTCCGGCAGCTTGTGCCGCCGCCAACGATTCCGTAG
CGCGATGGCGACGGCCCGCTTGGCGTCCGCCTGCCCCACGATATACCGAT
CGAGGTATTTGACCAATTCTTTCGGCTTTAGAGCCGCCGCCACAACCTCG
GGCGTGGCCGGCGTGGGTTGAGGCTTGTCCGCCGCCGCCGTTTCAGTCGA
TGTCGTCCCTGCCCCTCCATCTCCCGACACGGCCGTTCCGTCGCTTCCGC
CCGATGGTGGTGGCGGTGGCTCCGTCTCGATGCTTAGGGCCCTTCGATTG
CTTTGAGAGACGAGAGAGAGCGGCGTACAAGAAAACGAGTTATGCCGATG
CAGTGGTGGAATCGGATGGGACAAGCAGATTGAGGACGTGCTGACAGCAA
TACGGGTGTTGGGGGAGCTCGATGTTGAGAAAGGGATGGAGGACGCGGAC
GCTACCCTATTGCTGATGCTCGCACTGCGGGTCAGTGACCGAATCATGAC
GCTCGCACCTTGACTCCCTGCGCTAGGGAACGTGGCCCGATGTTTTATGC
GTATTGACGTGCCTGTAGCTTGTGTATTATAATTAATGATTTATTAGAGG
GAGTCAGATTGTTTGCTTCCATAACTGCTTTGAGAGGCGAGGGTAGCGAC
TTCCGGGGTACGGGTAGACTGCACGCACAGTAAATGTGCCCGGAATGAGG
AATTTCAACGTGCTCCGAGGTGCCCTGTCTGACGTGGTAACTCATAGGTT
GGTGGGCGGGACTGATGAGAAGAGGTCTCCAGGTCTAGTGATTCAATAAT
GATGACGGTTCAGGAAGTTCCTCTTCTCTCGCG

protein sequence of jgi.p|Nanoce1779_2|631024

>mRNA_5385-protein ID=mRNA_5385-protein|Name=jgi.p|Nanoce1779_2|631024|organism=Nannochloropsis oceanica|type=polypeptide|length=529bp
MLRGGGMMLDEDTGMWNSVSFGGTKGLMKSDGSKVMVGIDPLHQRPSFQD
MGQFEKETEERGAANAVGVLVSIGYALVMPAVSVLKRTRRFVRANQIRVL
SSLVILVILTLCIILAAVYFPSHTGKHHIRGDPWDNKPFIAPHGHSGTML
GAAEGGQYRNLFSEMLHKSEAEIDKKLGDTWRLLFEGNPINEAIYFPVGT
TPEGDKLGYMTNTESGWVTSEAMSYGMMAAVQFEKKEVFDALWAWSTRYM
KHITGKYKDFFAWQCSLAGQKMDPTPAPDGEEWFATALIFAHNRWSSTGR
YNYEKDALNLLAAMADPQRGMFSEKGEVTLNPVQPTITNPSYHLPQFYEV
WARFLTDRGQVKEAAFYLMAASKSRILWRKAANRHTGLAADYTDFDGVGV
KDLLGHSNFQWDAWRVVANLAVDWSWWRRDPWQEREADTLQAFLFSKGIH
DYPSTYSLNGTAMSESHSVGLVAVNAVASLAATDKNVATAFVAELWNAAI
PANKWRYYNGILAFLSLLQVSGRYRSYY*

mRNA from alignment at scaffold_13:312004..317549+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5385 ID=mRNA_5385|Name=jgi.p|Nanoce1779_2|631024|organism=Nannochloropsis oceanica|type=mRNA|length=5546bp|location=Sequence derived from alignment at scaffold_13:312004..317549+ (Nannochloropsis oceanica)
CGGTGTCCACCCTTCCTCCAGACCTTCGAATGCCGCCATCGCGGCTGCAG
CGGCGGCAGCCGCGCATCAGGGGGAGAGAGTGAGGCAAAGCATGTTAAGA
GGAGGTGGAATGATGTTGGACGAGGACACGGGGATGTGGAATTCAGTCTC
CTTTGGCGGCACGAAAGGGTTGATGAAGAGTGATGGGTCCAAGGTGATGG
TGGGGATAGATCCATTGCACCAGAGGCCGTCATTTCAGGATATGGGTCAA
TTTGAGAAGGAGACAGAGGAACGAGGGGCGGCAAACGCAGTAGGGGTGTT
GGTTTCGATAGGGTATGCCTTGGTAATGCCGGCGGTCAGGTACGTCTTTT
ATTGGGTCAGGACGGGAGGGAAGATGTAAAGGGAAGGGGAGGCAGCGCTA
CTACAGTCGATGATCTCATTCACCACCTCATTAATGCACGCCTTCAATCT
TCGCTTTGGTTTATTTCGTGCTTGATGCTCACAGTGTCTTAAAAAGAACC
CGCCGCTTCGTCCGCGCAAACCAAATACGGGTCCTCTCCTCCCTGGTTAT
CCTCGTCATACTCACCCTCTGCATCATCCTCGCCGCCGTCTACTTTCCGT
CCCATACGGGAAAGCACCATATCCGCGGCGACCCCTGGGACAACAAGCCT
TTCATCGCCCCCCACGGTCATTCAGGTAGGGAGGAGTTCCTATAAATTCC
CAATATGTGTAGCTATTGCCGCCGCTGTTGGATTTAGAGACGTGTTTTGT
TGCCTTGCCTGTGAAACGACCATCTCCTGCCCACTCGCTTGCCATATATA
TATATATATATATATATATATATATTCGGTAGCTCTTCTTTCTTGAAATT
TCCCTTCCCTTCCCCCTTCCTTCCCCCTTCCCTCCCCCCCAAGGCACCAT
GCTCGGCGCGGCCGAAGGCGGTCAATACCGGAACCTCTTCTCGGAAATGC
TACACAAATCCGAAGCAGAAATCGACAAGAAGCTCGGAGACACCTGGAGG
TTGCTTTTCGAGGGGAACCCCATCAACGAAGCCATCTATTTCCCTGTGGG
TACCACGCCCGAAGGAGATAAATTGGGGTACATGACCAACACGGAGAGTG
GGTGGGTGACGAGCGAGGCCATGTCGTATGGGATGATGGCGGCGGTGCAG
TTTGAAAAGAAGGAGGTCTTCGACGCCTTGTGGGCCTGGTCGACACGCTA
CATGAAACACATCACTGGCAAGTACAAGGACTTTTTCGCGTGGCAGTGCT
CACTAGCTGGACAGAAGATGGATCCAACCCCAGCACCGGATGGGGAGGAG
TGGTTCGCCACAGCTCTGATCTTTGCGCACAATAGGTGGTCGTCTACAGG
GAGGTATAATTACGAGAAGGACGCACTGAATCTACTCGCTGCCATGGCAG
ACCCTCAGCGAGGCATGTTCAGTGAGAAAGGGGAAGTGACGCTGAATCCG
GTGCAGCCTACCATTACTAATCCGTCTTACCACCTTCCTCAGTTTTATGA
GGTCTGGGCGCGTTTTTTGACCGATAGAGGACAAGTAAAAGAGGCTGCAT
TTTACCTGATGGCAGCGAGCAAGAGCAGGATTCTGTGGAGAAAGGCCGCA
AACCGACACACAGGGCTAGCAGCCGATTACACTGATTTTGATGGGGTGGG
GGTAAAGGACCTGTTGGGGCACTCCAACTTTCAATGGGACGCGTGGAGGG
TGGTGGCTAATCTAGCTGTGGACTGGTCGTGGTGGAGGCGCGATCCCTGG
CAAGAACGGGAGGCGGACACATTACAAGCGTTCTTGTTCTCGAAGGGAAT
TCATGACTACCCATCTACGTACTCGTTGAATGGGACGGCAATGTCGGAGA
GTCACTCCGTGGGGCTAGTGGCAGTGAATGCCGTGGCTTCCTTGGCGGCG
ACTGATAAGAATGTGGCCACGGCTTTCGTGGCCGAGCTTTGGAACGCAGC
GATTCCGGCGAATAAGTGGAGGTATTACAATGGTATTTTGGCATTTCTCT
CTTTGTTGCAGGTATCGGGCAGGTATCGGAGTTATTATTAGCTTAAGAAA
GTGATGTGGGTAATTTGTGAGAAGAAAATAGTGAGACACGGAAAGAGAAT
TAAACTCTTGGTTAAAAACTTACACGCTCAACTGGAGGGAGGGATGATAT
GGAAAACACTCAGGTTGGAAGAGAGTGAAGGACAAGTTCACATGGCGATG
GGTATAATGGTGTCAATAAGCGATAGAACAAACAACAGATGGCGCGAGAG
CTAGATTTCTGGCTTGATTTTCAAAAGACAGACACCGCCAGTGATTATCA
TGGTGGCGCTGAGAAATTTTAGTTTCCAAGGCATGTGATGTAGATGAGAG
TGCGTGAGGGCCACGCGCGCCCATGTGTGCGTTTGTCCGCATCTTCCCTG
TATGGTATAATGTAACAGAATGTCCTAAAACAGTGGGAAGGGGGAGAGAC
GATGAGAATGGTGTTTTGGTAAAATAGAGAGGGATACGGGGATGGAGACG
AATCTGGAGCGGAAAGGAGAACGAGGGCATGCCGATGTGAACATGCGTGT
GAAACAAACAAGGAACAAACTCAAAGAACATGCGAATAAGGGAAGAGACG
ATGTAGGGAGGGATGGTAATTAGGTAAGACAAGAAATTCATTGACAAAAA
GCGATTAAAGGCAAACTTAGAGATTGGGCGTCGATTATGTAGATGTGTGA
GCAGAGAGGAAGAGATGATGGTAGCAGCAAAGCTGAACCAGCCGTCCTGT
CCATCTCTTTCTCGCTTTCCCGACTTGCCAGCTGCTAGCCAGTCCAATGC
TGTCTCTTTATTGGCAGTAAGCCATACATGTGAGGAGATGTGCATAAATA
TAGAAGAAAAGCGGCGAGAAGTAGGGGGAAAGAAACATCATAACCCTCGT
ACAGCAAGAACGATAACAAGGGGGGGCACTGCGACAAGACCATAAAGCAG
CAGAAAAGAGAGAAGAAGAGTTGCAGCAGAATCCTCATCACCATCAGCCA
AACCAGGGGGTGGAGCCATCGAGGGAAAAGAAAGAAACAACATGTGTGAG
ATCCCCACCACGGTGAGGAGGAAGTAACCAGTCAGACACTGCTCGTCGTG
CTTTAGATTCAGTACGCGTGCAAGTTCCACACATATCAACAAACAACCTT
GTTGTCGTATTTTGAGTTGTAACAAAATTGCACGTACAGCATTGCCAAAT
CAGATGGCCAAGCTTCCTTTCCCGATTGATTCAAGTAATTGGGTACCAAT
AGGAAACGCACAGCACATCGCTTCACAAATGTTGTTCTTTCCTCACCTTT
GCCTTCACTCGTCTCTCCACCTTTCTTTTCAAACCCTTCCAATCGCACAA
CGGAGGCCCCCTGCTGCAATGAAGGGGCATCTTCGCATTCCTTTCCTGCT
TATTTCCCATTATTCAAGAGGGGCATGTCAAGAGGGGCATACACGCTAGG
CAGTGTATAGACATTGTGGTGAGCATGGCTAAGCAAAATACCGCGCTATT
TTGTTTTTACAAGATGTACTTAGAGATATCAGACTCGACCAGGAGGTCAT
TGACGCGGCTCTGAACGAGGTCCTTGTCCACGGTTATGACGGCTCCTTCG
GCCTTGTCCGAGGCCTCGAAAGAAATCTCCTCCACAATACGCTCCAGCAC
TGTGTGCAGGCGGCGCGCTCCAATGTTCTCCACAGTCTTGTTGACCAAGG
CAGCAACCCGCGCGATCTCCCGCACAGCCTCGTCCGTGAATTCCAACGCT
ACCTTTTCGGTAGAGAGTAACGCTACCTGCTGGGCGATGAGGTTGGTGAT
GGGCTCCGTCAGTATACGGTACATGTCATCCTCCGTCAGGCCCTTAAGCT
CCACCCGGATGGGCAGCCTACCCTGCAGCTCGGCCAGCAGGTCGGCGGGC
TTGCACTGGTGAAAGGCACCCGATGATATGAAGAGGATGTAGTCCGTGTT
CACATTCCCGTGCTTAGTGCTGATGGTACAACCCTCGATTAGCGGAAGGA
GGTCCCGTTGGACGCCCTCCGCAGAGGCGTCCGCGCCCCGGTAGTCGCTG
GGGTTGCAGATCTTGTCGATCTCGTCGATGAAGACAATGCCGCTCTCCTC
CACTGACTGAATGGCCTCCCGCGTAACGTCCGACATGTCCACAAGCTTCT
CCATTTCCACCTCCAGTAGCAGCGGCATTGCCTCCTTGACCAGGATCTTT
CTTTTCTCCATAGGACGTTTGGGCATAATGGCGCGCGAGAACTTGCCGAT
AAAGTCCGCCATGGAAACGTTCGGGTTGCTCTCAGCGAATGCCCCGCTGC
CCGGCCCTGCACCCGCTTTGTCGAATACACCCCCTGCACTGCCCCGGTCC
GCAGGAACCTCCACGTCGACGAGCCGGTCATTAAGGCTGCCCTTGCGCAG
CAGGTCACGGAAAGTCTCCTTCGCGTCGTCTCGCGCATAGGGGCCCGTCA
GTATCTGGAGGATCTTTTCCTCCACCGCCTTCTGGGCCTCCGCCTTGATG
GCCTCACTACGCCGCTTTTTTGTCATGTTCACCGAGATCTCCACCAAATC
GCGGATGATCTGGTCCACGTCGCGGCCGTGGAAGCCAACTTCCGTGAACT
TGGTGGCCTCCACTTTGATGAAAGGCGCGTCCGAGAGTTTCGCAATGCGC
CGTGCAATTTCCGTCTTGCCACAGCCCGTGGGACCAATCATCAGGATATT
CTTAGGGATGATCTCCGTCCGCAGGTCCTCCGGCAGCTTGTGCCGCCGCC
AACGATTCCGTAGCGCGATGGCGACGGCCCGCTTGGCGTCCGCCTGCCCC
ACGATATACCGATCGAGGTATTTGACCAATTCTTTCGGCTTTAGAGCCGC
CGCCACAACCTCGGGCGTGGCCGGCGTGGGTTGAGGCTTGTCCGCCGCCG
CCGTTTCAGTCGATGTCGTCCCTGCCCCTCCATCTCCCGACACGGCCGTT
CCGTCGCTTCCGCCCGATGGTGGTGGCGGTGGCTCCGTCTCGATGCTTAG
GGCCCTTCGATTGCTTTGAGAGACGAGAGAGAGCGGCGTACAAGAAAACG
AGTTATGCCGATGCAGTGGTGGAATCGGATGGGACAAGCAGATTGAGGAC
GTGCTGACAGCAATACGGGTGTTGGGGGAGCTCGATGTTGAGAAAGGGAT
GGAGGACGCGGACGCTACCCTATTGCTGATGCTCGCACTGCGGGTCAGTG
ACCGAATCATGACGCTCGCACCTTGACTCCCTGCGCTAGGGAACGTGGCC
CGATGTTTTATGCGTATTGACGTGCCTGTAGCTTGTGTATTATAATTAAT
GATTTATTAGAGGGAGTCAGATTGTTTGCTTCCATAACTGCTTTGAGAGG
CGAGGGTAGCGACTTCCGGGGTACGGGTAGACTGCACGCACAGTAAATGT
GCCCGGAATGAGGAATTTCAACGTGCTCCGAGGTGCCCTGTCTGACGTGG
TAACTCATAGGTTGGTGGGCGGGACTGATGAGAAGAGGTCTCCAGGTCTA
GTGATTCAATAATGATGACGGTTCAGGAAGTTCCTCTTCTCTCGCG

Coding sequence (CDS) from alignment at scaffold_13:312004..317549+

>mRNA_5385 ID=mRNA_5385|Name=jgi.p|Nanoce1779_2|631024|organism=Nannochloropsis oceanica|type=CDS|length=4761bp|location=Sequence derived from alignment at scaffold_13:312004..317549+ (Nannochloropsis oceanica)
ATGTTAAGAGGAGGTGGAATGATGTTGGACGAGGACACGGGGATGTGGAA
TTCAGTCTCCTTTGGCGGCACGAAAGGGTTGATGAAGAGTGATGGGTCCA
AGGTGATGGTGGGGATAGATCCATTGCACCAGAGGCCGTCATTTCAGGAT
ATGGGTCAATTTGAGAAGGAGACAGAGGAACGAGGGGCGGCAAACGCAGT
AGGGGTGTTGGTTTCGATAGGGTATGCCTTGGTAATGCCGGCGGTCAGTG
TCTTAAAAAGAACCCGCCGCTTCGTCCGCGCAAACCAAATACGGGTCCTC
TCCTCCCTGGTTATCCTCGTCATACTCACCCTCTGCATCATCCTCGCCGC
CGTCTACTTTCCGTCCCATACGGGAAAGCACCATATCCGCGGCGACCCCT
GGGACAACAAGCCTTTCATCGCCCCCCACGGTCATTCAGGCACCATGCTC
GGCGCGGCCGAAGGCGGTCAATACCGGAACCTCTTCTCGGAAATGCTACA
CAAATCCGAAGCAGAAATCGACAAGAAGCTCGGAGACACCTGGAGGTTGC
TTTTCGAGGGGAACCCCATCAACGAAGCCATCTATTTCCCTGTGGGTACC
ACGCCCGAAGGAGATAAATTGGGGTACATGACCAACACGGAGAGTGGGTG
GGTGACGAGCGAGGCCATGTCGTATGGGATGATGGCGGCGGTGCAGTTTG
AAAAGAAGGAGGTCTTCGACGCCTTGTGGGCCTGGTCGACACGCTACATG
AAACACATCACTGGCAAGTACAAGGACTTTTTCGCGTGGCAGTGCTCACT
AGCTGGACAGAAGATGGATCCAACCCCAGCACCGGATGGGGAGGAGTGGT
TCGCCACAGCTCTGATCTTTGCGCACAATAGGTGGTCGTCTACAGGGAGG
TATAATTACGAGAAGGACGCACTGAATCTACTCGCTGCCATGGCAGACCC
TCAGCGAGGCATGTTCAGTGAGAAAGGGGAAGTGACGCTGAATCCGGTGC
AGCCTACCATTACTAATCCGTCTTACCACCTTCCTCAGTTTTATGAGGTC
TGGGCGCGTTTTTTGACCGATAGAGGACAAGTAAAAGAGGCTGCATTTTA
CCTGATGGCAGCGAGCAAGAGCAGGATTCTGTGGAGAAAGGCCGCAAACC
GACACACAGGGCTAGCAGCCGATTACACTGATTTTGATGGGGTGGGGGTA
AAGGACCTGTTGGGGCACTCCAACTTTCAATGGGACGCGTGGAGGGTGGT
GGCTAATCTAGCTGTGGACTGGTCGTGGTGGAGGCGCGATCCCTGGCAAG
AACGGGAGGCGGACACATTACAAGCGTTCTTGTTCTCGAAGGGAATTCAT
GACTACCCATCTACGTACTCGTTGAATGGGACGGCAATGTCGGAGAGTCA
CTCCGTGGGGCTAGTGGCAGTGAATGCCGTGGCTTCCTTGGCGGCGACTG
ATAAGAATGTGGCCACGGCTTTCGTGGCCGAGCTTTGGAACGCAGCGATT
CCGGCGAATAAGTGGAGGTATTACAATGGTATTTTGGCATTTCTCTCTTT
GTTGCAGGTATCGGGCAGGTATCGGAGTTATTATTAGATGTTAAGAGGAG
GTGGAATGATGTTGGACGAGGACACGGGGATGTGGAATTCAGTCTCCTTT
GGCGGCACGAAAGGGTTGATGAAGAGTGATGGGTCCAAGGTGATGGTGGG
GATAGATCCATTGCACCAGAGGCCGTCATTTCAGGATATGGGTCAATTTG
AGAAGGAGACAGAGGAACGAGGGGCGGCAAACGCAGTAGGGGTGTTGGTT
TCGATAGGGTATGCCTTGGTAATGCCGGCGGTCAGTGTCTTAAAAAGAAC
CCGCCGCTTCGTCCGCGCAAACCAAATACGGGTCCTCTCCTCCCTGGTTA
TCCTCGTCATACTCACCCTCTGCATCATCCTCGCCGCCGTCTACTTTCCG
TCCCATACGGGAAAGCACCATATCCGCGGCGACCCCTGGGACAACAAGCC
TTTCATCGCCCCCCACGGTCATTCAGGCACCATGCTCGGCGCGGCCGAAG
GCGGTCAATACCGGAACCTCTTCTCGGAAATGCTACACAAATCCGAAGCA
GAAATCGACAAGAAGCTCGGAGACACCTGGAGGTTGCTTTTCGAGGGGAA
CCCCATCAACGAAGCCATCTATTTCCCTGTGGGTACCACGCCCGAAGGAG
ATAAATTGGGGTACATGACCAACACGGAGAGTGGGTGGGTGACGAGCGAG
GCCATGTCGTATGGGATGATGGCGGCGGTGCAGTTTGAAAAGAAGGAGGT
CTTCGACGCCTTGTGGGCCTGGTCGACACGCTACATGAAACACATCACTG
GCAAGTACAAGGACTTTTTCGCGTGGCAGTGCTCACTAGCTGGACAGAAG
ATGGATCCAACCCCAGCACCGGATGGGGAGGAGTGGTTCGCCACAGCTCT
GATCTTTGCGCACAATAGGTGGTCGTCTACAGGGAGGTATAATTACGAGA
AGGACGCACTGAATCTACTCGCTGCCATGGCAGACCCTCAGCGAGGCATG
TTCAGTGAGAAAGGGGAAGTGACGCTGAATCCGGTGCAGCCTACCATTAC
TAATCCGTCTTACCACCTTCCTCAGTTTTATGAGGTCTGGGCGCGTTTTT
TGACCGATAGAGGACAAGTAAAAGAGGCTGCATTTTACCTGATGGCAGCG
AGCAAGAGCAGGATTCTGTGGAGAAAGGCCGCAAACCGACACACAGGGCT
AGCAGCCGATTACACTGATTTTGATGGGGTGGGGGTAAAGGACCTGTTGG
GGCACTCCAACTTTCAATGGGACGCGTGGAGGGTGGTGGCTAATCTAGCT
GTGGACTGGTCGTGGTGGAGGCGCGATCCCTGGCAAGAACGGGAGGCGGA
CACATTACAAGCGTTCTTGTTCTCGAAGGGAATTCATGACTACCCATCTA
CGTACTCGTTGAATGGGACGGCAATGTCGGAGAGTCACTCCGTGGGGCTA
GTGGCAGTGAATGCCGTGGCTTCCTTGGCGGCGACTGATAAGAATGTGGC
CACGGCTTTCGTGGCCGAGCTTTGGAACGCAGCGATTCCGGCGAATAAGT
GGAGGTATTACAATGGTATTTTGGCATTTCTCTCTTTGTTGCAGGTATCG
GGCAGGTATCGGAGTTATTATTAGATGTTAAGAGGAGGTGGAATGATGTT
GGACGAGGACACGGGGATGTGGAATTCAGTCTCCTTTGGCGGCACGAAAG
GGTTGATGAAGAGTGATGGGTCCAAGGTGATGGTGGGGATAGATCCATTG
CACCAGAGGCCGTCATTTCAGGATATGGGTCAATTTGAGAAGGAGACAGA
GGAACGAGGGGCGGCAAACGCAGTAGGGGTGTTGGTTTCGATAGGGTATG
CCTTGGTAATGCCGGCGGTCAGTGTCTTAAAAAGAACCCGCCGCTTCGTC
CGCGCAAACCAAATACGGGTCCTCTCCTCCCTGGTTATCCTCGTCATACT
CACCCTCTGCATCATCCTCGCCGCCGTCTACTTTCCGTCCCATACGGGAA
AGCACCATATCCGCGGCGACCCCTGGGACAACAAGCCTTTCATCGCCCCC
CACGGTCATTCAGGCACCATGCTCGGCGCGGCCGAAGGCGGTCAATACCG
GAACCTCTTCTCGGAAATGCTACACAAATCCGAAGCAGAAATCGACAAGA
AGCTCGGAGACACCTGGAGGTTGCTTTTCGAGGGGAACCCCATCAACGAA
GCCATCTATTTCCCTGTGGGTACCACGCCCGAAGGAGATAAATTGGGGTA
CATGACCAACACGGAGAGTGGGTGGGTGACGAGCGAGGCCATGTCGTATG
GGATGATGGCGGCGGTGCAGTTTGAAAAGAAGGAGGTCTTCGACGCCTTG
TGGGCCTGGTCGACACGCTACATGAAACACATCACTGGCAAGTACAAGGA
CTTTTTCGCGTGGCAGTGCTCACTAGCTGGACAGAAGATGGATCCAACCC
CAGCACCGGATGGGGAGGAGTGGTTCGCCACAGCTCTGATCTTTGCGCAC
AATAGGTGGTCGTCTACAGGGAGGTATAATTACGAGAAGGACGCACTGAA
TCTACTCGCTGCCATGGCAGACCCTCAGCGAGGCATGTTCAGTGAGAAAG
GGGAAGTGACGCTGAATCCGGTGCAGCCTACCATTACTAATCCGTCTTAC
CACCTTCCTCAGTTTTATGAGGTCTGGGCGCGTTTTTTGACCGATAGAGG
ACAAGTAAAAGAGGCTGCATTTTACCTGATGGCAGCGAGCAAGAGCAGGA
TTCTGTGGAGAAAGGCCGCAAACCGACACACAGGGCTAGCAGCCGATTAC
ACTGATTTTGATGGGGTGGGGGTAAAGGACCTGTTGGGGCACTCCAACTT
TCAATGGGACGCGTGGAGGGTGGTGGCTAATCTAGCTGTGGACTGGTCGT
GGTGGAGGCGCGATCCCTGGCAAGAACGGGAGGCGGACACATTACAAGCG
TTCTTGTTCTCGAAGGGAATTCATGACTACCCATCTACGTACTCGTTGAA
TGGGACGGCAATGTCGGAGAGTCACTCCGTGGGGCTAGTGGCAGTGAATG
CCGTGGCTTCCTTGGCGGCGACTGATAAGAATGTGGCCACGGCTTTCGTG
GCCGAGCTTTGGAACGCAGCGATTCCGGCGAATAAGTGGAGGTATTACAA
TGGTATTTTGGCATTTCTCTCTTTGTTGCAGGTATCGGGCAGGTATCGGA
GTTATTATTAG

Synonyms

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