jgi.p|Nanoce1779_2|594037, mRNA_6178 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|594037
Unique Name	mRNA_6178
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4367
Alignment location	scaffold_14:716111..720606 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	594123
Track	FilteredModels2
ProteinId	594037

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_14	supercontig	scaffold_14:716111..720606 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|594037	gene_6178	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|594037	mRNA_6178-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_6178	CDS_6178	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_14:716111..720606+
coding sequence from alignment at scaffold_14:716111..720606+

mRNA sequence

>mRNA_6178 ID=mRNA_6178|Name=jgi.p|Nanoce1779_2|594037|organism=Nannochloropsis oceanica|type=mRNA|length=4367bp
AGAGCACAGGACACTTCAAGCCTTTCTATCAGCTTGCAGCCTACCGTACG
TGGCACTTGGAATGCCCCATCTCAACAACGCCTCTAGCTATGGCGCCAGC
ACAATGAATCTGTCCCGTAGCCGAGGGGCGCCGTCCATTTTGAAGAAACA
ATGCTCCTCTTATCGCTTCCATGATGGCACAGCGTCGGTGGAGGAGCACA
TTGCCTTGTTGCTCGAGGACTTGATTCGCTACGGATCTCAAGCCACATTA
TCCGCGGCCGAAGACATGGTGTTGCGTGAAGCCTTCTTGGGTCTGCATTA
CGTCTGGCGGATGCGCATTCGTGCCAGCTCCATTACAGCTTTTACTCCGG
AACTCATGGAACGTCTCCGGGGGGCACTGCTTCTCTTTATGGGCCGCGTC
AATATGCGGGGGCCTGTGCCCTTCTTGGCCAAGCCGGTGCCGACCCGGGA
AGCAGTTTTTGCCTTTACTATATTTTGTGGAATGCTCAAGGACGTGATTG
CTTTTCGGGAGGTTGTAAACAATAACATGACGGTTGCAGATCTGCGTCGG
GCATTGGCAGTGCACCTGTGGCTGTCCATCACAGAGGTGGAGGAGGACGA
GGGGGCGCCCGACGAGGACATCACGAACACGGTGGGCTGGTCTTCCATCA
AGTTTTCGGTCGAGGACATCCGTCGACTGGCGGTTGTGACGGTGCTGTTC
TTAACGGGCCTGCTTAATGCTTGCAACGATTGGGAAGAGCTCGTAGAACC
TCGGGCACACGCCCTCTTCCAAAAGTATCAAAAGGTTGCGCAGGTGGAGA
ATTACCCAGACCGGAAGCCTAAGCCCTTGCTGGCACCAAAGGGCGAGTAC
TGGGACACGGACGTGAAAAAGGTGTTGGGCATGTTTCGGACCCAGGTCGA
AAAAGGCCTCACCGAGGCCGAGGTACTTGCCCGGAGGGAGGTGTACGGCG
ACAACCGCACCCCCCCCATGGCACGGGCGTCGGTGCTGGGTATCCTGTTT
CGGCAACTCGCGGATTTGATTGTGATCATTTTACTGGTCGCCAGCGTTGT
CAGTGCCTGTTTGGGCGACTACAAAACGGCAGTGGTGCTGGGGATTGTGG
TCTCGATCAACACGGCAATTGGTTTCTACCAAGAATGGAACGCGGAGCGC
GCCATCTCTGCATTGGCGTCGCTTTCGGTGCCACAATGCACGGTGATCCG
GGGAGGCACATCTCGTATGGTGGAAGCGGGTGACCTGGTGCCGGGAGACA
TTGTGGTGCTGGATGAAGGGGCTGCCGTACCCGCGGACTTGCGCTTGTGC
AGTGTGTCACAGCTGGCGATCATTGAAACACTCTTGACGGGTGAATCCGT
GCCTATGGAGAAGATCACCGACGCGATCCACGGCTATCGCCGCGTAAATA
TTGGAGACCGGACCAACATGGCTTTCCAGAGCACGGTAGTGAGCCGTGGC
CGCGGTGTCGGTGTAGTGGTAAATACAGGGGAGACCACAGAGATTGGACG
CATCAGTGCAGCCATTGCCGGTACTCACGTGGGGAAAACGCCGTTGCAGA
AGAAAATGGATGCGCTAGGGAAAATGTTGGTGATGATGGCTATCTTTGCC
TGTGGCCTTGTGGTGGTTGCTGGCATTATCTGGGACCCAAGGGACATGGG
TATTATAAAGGTTGGCATTTCACTTGCTCTCAGCGTTATTCCGGAAGGCT
TGGTAGCCATCGTCACTTTGACCATGGCGCTGGGTATGAAGCGCATGGCC
AAGGGAAATGCTTTGGTTCGACAACTTCCCGCAGTAGAGACGCTCGGCAG
CGTCACAACAATTTGTTCGGACAAGACCGGGACGATTACTGAGGGGGTCA
TGCGGGCGCGCCTTATGTGGGCACCCGAGGGTCATCTCCACATCCCCATG
GCCCTTGGGAGGGAGGGGGCGGCAGGGTTGGGCCTCTCCCGTATGGAAGG
CTCCTCTACGCATATAGTAGCAACCGCTTTAAGCGCAGCTGTGGGTACCC
AGGGGACCGGGAACGCCAAGCCAGTGCGGGCCGAGAAATTGGTACCAGTG
GATGCAGCGGCACAGTGGCAGCTTGCAATTATGGCCATTTGCAACAACTC
GACGCTTAATGCTCATCGGGGTATGGATGGCTGCTTCACGGGGATTGGGG
ACCAAACAGAGGTAGCGCTCAAGGTTTTAGCTGTCGAGACAGGCTTATCT
TGGCCCGAGACTCGTTTAAAGCGGGGAGCCGAGATCGCGTTCGACTCGGA
CCGAAAACGCATGTCGGTGGTGTGCTCGGTTATGCACGAGTCTGAGGATG
GGCCGGTAGAATTGGGCAACTGCACGGGAACCTCCCGGTTGGTTTTGTCC
AAGGGCGCACCCGAAGTTGTCCTGGGGTTGTGTTCGGAATGGATGGGCAC
CGATGGCAAGACAAACAAAATGGATGCCACCAAACTTAAGGAGGTCGATG
CTTGGTGCGACGCCTTTTCCGCCCAGGGCTTGCGTACGTTGGCGTTGGCA
ATGCGTTTCGATGATTCGGGCAACCTGGTTGATGACGTGGGGCTGGATGA
GGAGAAGGTGGAGGTGGCGCTTGTTTTTGTAGGGCTTGTGGCATTGGCCG
ACCCCCCTCGCAAAGGTATTGAGCAGTCCATCAAGGCCTGTCACGATGCA
GGTATTCGTGTGGTGATGATCACGGGCGATCATGTTCGCACAGCCACATC
GATTGCTCAGTCTGTAGGTATTTTGGATGTGTCCGAGGATGAAGGGGGGT
CATTGGTGCTGAACGGCTCGGCGCTCTCTTCCATGACGGTGGAGCAGCTT
GCCATCCTGGACCCTTTCCCCGTAGTTTTTTCTCGCGTCTCGCCCGACAA
CAAATTGAATATTGTTAAGGCCCTGCAAATGCGCGGGGACGTGGTGGCCA
TGACGGGCGATGGCGTGAATGATGCTCCGGCGATTCGTCAGGCGGATGTT
GGGGTGGCGATGGGCCGTTCGGGTACTGATATAACGCGGCAGGCGGCCGA
CATAATCCTCGCCGACGATAACTTCTCTACCATTGTGGTGGCAGTGGCAG
AGGGACGAAAGATCATGGATAATATCATCAAGTTTTTGGTTTATCTTCTC
TCATGCAACCTTTCAGAGGTGATTCTGATGCTGGTGGCCGTCTCTGCCGG
GTATCCAGAGCCGCTCAACGCCCTGCAGATTTTGTACGCCAACATTGTTG
TGGACATTCCCCCCTCATTGGCGTTGGGTGCAGAGCAAATTGAACCCGAC
GCGATGTTTCGCACGCCCCGCAACCCACAAAAACCAATTCTGGGCAAACG
CTACACGTTGGCGCTGATCGTGCAAGCTTCGTCCATCGGTCTCTTGTCGT
TTGGCAGTTATGTAATTTGCCTGGACGTGGAAAAGTTGTCGTTGGAACAG
GCGCGTTCCGAGGCATTTGCTGTTGTCTTCATAGTACAGTGCGCCCACTC
GTTCATGTCTCGTTCCATTCGAAACTCTCTTCTCACCTCGGGGCCGCGGG
AATTATTTTTTGGAAACATGTGGCTGCTTTGGGGGTGCACCATCTCGGTC
CTTGCCGTCGTGGCAGGCATTTACACCCCGGGGTTCAACAGTATTTTTGG
CCTGGTGCCCATCGATGGTCGCGGTTGGCTCAAGGTCCTGGTGGCCCTGA
TTGTGCATTTATGCATCGTCGAGTTTGGAAAGTGGCGCATCCGTCATGTT
ATACCCAAATCGACCTCGGTAACTTCTCCGTTTGGTGGTGAAAGGACGTC
AATGCCTCTGGCGCGATTGCCCGTCGTTGCAGGGGTTGAGAGGGCGATCT
CGGGCTCTAAAAAAGTGGAAAAGACCTTGGCAGGGGCGTCAGTGCCCAGC
ATAGGAGAGGCAGCAGCCTAATCAATTGATCAATAAAGAATTACGTGGCA
TTTTGATTTTGATAGCTAAAGCGGGGGTGGAGAAGGCCTTAGCAGCGATG
GCGTTGGCGGGCGCGAAGAAGGACCTTTAAGATTTGTTCAAAGGGACGTT
GAAATTCGATAAAGATCTGCGAGCATGCGCGATGTATTCCATGACAATAA
AATGATAAGTGATGCTACCTCTACTGACGCTGAGCGAGTGAACGAAAGGA
CAAGTTTATGTTATAAACAAATATGTATCAAGAAGTCGATGATCTGTAAT
TAAAAGAGAAGGAAAAGGGAGCGGTATCACGAGAAAAGCCGAGCCGTGAA
TGGAACAGGGGCAATCAAGAAAAACGAACATTTCGAAGTCTCGATGTGGC
TTGTGGGAGATTACCGGTTTATTGGCAAGCCCATTGGGCAAGGCGTCTCT
TGGACACGTATACCTTGTTCTCCTTTAAAAATGAATTTATACATGTAAGT
CTCCTGGATTTTTTAAA

protein sequence of jgi.p|Nanoce1779_2|594037

>mRNA_6178-protein ID=mRNA_6178-protein|Name=jgi.p|Nanoce1779_2|594037|organism=Nannochloropsis oceanica|type=polypeptide|length=1270bp
MPHLNNASSYGASTMNLSRSRGAPSILKKQCSSYRFHDGTASVEEHIALL
LEDLIRYGSQATLSAAEDMVLREAFLGLHYVWRMRIRASSITAFTPELME
RLRGALLLFMGRVNMRGPVPFLAKPVPTREAVFAFTIFCGMLKDVIAFRE
VVNNNMTVADLRRALAVHLWLSITEVEEDEGAPDEDITNTVGWSSIKFSV
EDIRRLAVVTVLFLTGLLNACNDWEELVEPRAHALFQKYQKVAQVENYPD
RKPKPLLAPKGEYWDTDVKKVLGMFRTQVEKGLTEAEVLARREVYGDNRT
PPMARASVLGILFRQLADLIVIILLVASVVSACLGDYKTAVVLGIVVSIN
TAIGFYQEWNAERAISALASLSVPQCTVIRGGTSRMVEAGDLVPGDIVVL
DEGAAVPADLRLCSVSQLAIIETLLTGESVPMEKITDAIHGYRRVNIGDR
TNMAFQSTVVSRGRGVGVVVNTGETTEIGRISAAIAGTHVGKTPLQKKMD
ALGKMLVMMAIFACGLVVVAGIIWDPRDMGIIKVGISLALSVIPEGLVAI
VTLTMALGMKRMAKGNALVRQLPAVETLGSVTTICSDKTGTITEGVMRAR
LMWAPEGHLHIPMALGREGAAGLGLSRMEGSSTHIVATALSAAVGTQGTG
NAKPVRAEKLVPVDAAAQWQLAIMAICNNSTLNAHRGMDGCFTGIGDQTE
VALKVLAVETGLSWPETRLKRGAEIAFDSDRKRMSVVCSVMHESEDGPVE
LGNCTGTSRLVLSKGAPEVVLGLCSEWMGTDGKTNKMDATKLKEVDAWCD
AFSAQGLRTLALAMRFDDSGNLVDDVGLDEEKVEVALVFVGLVALADPPR
KGIEQSIKACHDAGIRVVMITGDHVRTATSIAQSVGILDVSEDEGGSLVL
NGSALSSMTVEQLAILDPFPVVFSRVSPDNKLNIVKALQMRGDVVAMTGD
GVNDAPAIRQADVGVAMGRSGTDITRQAADIILADDNFSTIVVAVAEGRK
IMDNIIKFLVYLLSCNLSEVILMLVAVSAGYPEPLNALQILYANIVVDIP
PSLALGAEQIEPDAMFRTPRNPQKPILGKRYTLALIVQASSIGLLSFGSY
VICLDVEKLSLEQARSEAFAVVFIVQCAHSFMSRSIRNSLLTSGPRELFF
GNMWLLWGCTISVLAVVAGIYTPGFNSIFGLVPIDGRGWLKVLVALIVHL
CIVEFGKWRIRHVIPKSTSVTSPFGGERTSMPLARLPVVAGVERAISGSK
KVEKTLAGASVPSIGEAAA*

mRNA from alignment at scaffold_14:716111..720606+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6178 ID=mRNA_6178|Name=jgi.p|Nanoce1779_2|594037|organism=Nannochloropsis oceanica|type=mRNA|length=4496bp|location=Sequence derived from alignment at scaffold_14:716111..720606+ (Nannochloropsis oceanica)
AGAGCACAGGACACTTCAAGCCTTTCTATCAGCTTGCAGCCTACCGTACG
TGGCACTTGGAATGCCCCATCTCAACAACGCCTCTAGCTATGGCGCCAGC
ACAATGAATCTGTCCCGTAGCCGAGGGGCGCCGTCCATTTTGAAGAAACA
ATGCTCCTCTTATCGCTTCCATGATGGCACAGCGTCGGTGGAGGAGCACA
TTGCCTTGTTGCTCGAGGACTTGATTCGCTACGGATCTCAAGCCACATTA
TCCGCGGCCGAAGACATGGTGTTGCGTGAAGCCTTCTTGGGTCTGCATTA
CGTCTGGCGGATGCGCATTCGTGCCAGCTCCATTACAGCTTTTACTCCGG
AACTCATGGAACGTCTCCGGGGGGCACTGCTTCTCTTTATGGGCCGCGTC
AATATGCGGGGGCCTGTGCCCTTCTTGGCCAAGCCGGTGCCGACCCGGGA
AGCAGTTTTTGCCTTTACTATATTTTGTGGAATGCTCAAGGACGTGATTG
CTTTTCGGGAGGTTGTAAACAATAACATGACGGTTGCAGATCTGCGTCGG
GCATTGGCAGTGCACCTGTGGCTGTCCATCACAGAGGTGGAGGAGGACGA
GGGGGCGCCCGACGAGGACATCACGAACACGGTGGGCTGGTCTTCCATCA
AGTTTTCGGTCGAGGACATCCGTCGACTGGCGGTTGTGACGGTGCTGTTC
TTAACGGGCCTGCTTAATGCTTGCAACGATTGGGAAGAGCTCGTAGAACC
TCGGGCACACGCCCTCTTCCAAAAGTATCAAAAGGTTGCGCAGGTGGAGA
ATTACCCAGACCGGAAGCCTAAGCCCTTGCTGGCACCAAAGGGCGAGTAC
TGGGACACGGACGTGAAAAAGGTGTTGGGCATGTTTCGGACCCAGGTCGA
AAAAGGCCTCACCGAGGCCGAGGTACTTGCCCGGAGGGAGGTGTACGGCG
ACAACCGCACCCCCCCCATGGCACGGGCGTCGGTGCTGGGTATCCTGTTT
CGGCAACTCGCGGATTTGATTGTGATCATTTTACTGGTCGCCAGCGTTGT
CAGTGCCTGTTTGGGCGACTACAAAACGGCAGTGGTGCTGGGGATTGTGG
TCTCGATCAACACGGCAATTGGTTTCTACCAAGAATGGAACGCGGAGCGC
GCCATCTCTGCATTGGCGTCGCTTTCGGTGCCACAATGCACGGTGATCCG
GGGAGGCACATCTCGTATGGTGGAAGCGGGTGACCTGGTGCCGGGAGACA
TTGTGGTGCTGGATGAAGGGGCTGCCGTACCCGCGGACTTGCGCTTGTGC
AGTGTGTCACAGCTGGCGATCATTGAAACACTCTTGACGGGTGAATCCGT
GCCTATGGAGAAGATCACCGACGCGATCCACGGCTATCGCCGCGTAAATA
TTGGAGACCGGACCAACATGGCTTTCCAGAGCACGGTAGTGAGCCGTGGC
CGCGGTGTCGGTGTAGTGGTAAATACAGGGGAGACCACAGAGATTGGACG
CATCAGTGCAGCCATTGCCGGTACTCACGTGGGGAAAACGCCGTTGCAGA
AGAAAATGGATGCGCTAGGGAAAATGTTGGTGATGATGGCTATCTTTGCC
TGTGGCCTTGTGGTGGTTGCTGGCATTATCTGGGACCCAAGGGACATGGG
TATTATAAAGGTTGGCATTTCACTTGCTCTCAGCGTTATTCCGGAAGGCT
TGGTAGCCATCGTCACTTTGACCATGGCGCTGGGTATGAAGCGCATGGCC
AAGGGAAATGCTTTGGTTCGACAACTTCCCGCAGTAGAGACGCTCGGCAG
CGTCACAACAATTTGTTCGGACAAGACCGGGACGATTACTGAGGGGGTCA
TGCGGGCGCGCCTTATGTGGGCACCCGAGGGTCATCTCCACATCCCCATG
GCCCTTGGGAGGGAGGGGGCGGCAGGGTTGGGCCTCTCCCGTATGGAAGG
CTCCTCTACGCATATAGTAGCAACCGCTTTAAGCGCAGCTGTGGGTACCC
AGGGGACCGGGAACGCCAAGCCAGTGCGGGCCGAGAAATTGGTACCAGTG
GATGCAGCGGCACAGTGGCAGCTTGCAATTATGGCCATTTGCAACAACTC
GACGCTTAATGCTCATCGGGGTATGGATGGCTGCTTCACGGGGATTGGGG
ACCAAACAGAGGTAGCGCTCAAGGTTTTAGCTGTCGAGACAGGCTTATCT
TGGCCCGAGACTCGTTTAAAGCGGGGAGCCGAGATCGCGTTCGACTCGGA
CCGAAAACGCATGTCGGTGGTGTGCTCGGTTATGCACGAGTCTGAGGATG
GGCCGGTAGAATTGGGCAACTGCACGGGAACCTCCCGGTTGGTTTTGTCC
AAGGGCGCACCCGAAGTTGTCCTGGGGTTGTGTTCGGAATGGATGGGCAC
CGATGGCAAGACAAACAAAATGGATGCCACCAAACTTAAGGAGGTCGATG
CTTGGTGCGACGCCTTTTCCGCCCAGGGCTTGCGTACGTTGGCGTTGGCA
ATGCGTTTCGATGATTCGGGCAACCTGGTTGATGACGTGGGGCTGGATGA
GGAGAAGGTGGAGGTGGCGCTTGTTTTTGTAGGGCTTGTGGCATTGGCCG
ACCCCCCTCGCAAAGGTATTGAGCAGTCCATCAAGGCCTGTCACGATGCA
GGTATTCGTGTGGTGATGATCACGGGCGATCATGTTCGCACAGCCACATC
GATTGCTCAGTCTGTAGGTATTTTGGATGTGTCCGAGGATGAAGGGGGGT
CATTGGTGCTGAACGGCTCGGCGCTCTCTTCCATGACGGTGGAGCAGCTT
GCCATCCTGGACCCTTTCCCCGTAGTTTTTTCTCGCGTCTCGCCCGACAA
CAAATTGAATATTGTTAAGGCCCTGCAAATGCGCGGGGACGTGGTGGCCA
TGACGGGCGATGGCGTGAATGATGCTCCGGCGATTCGTCAGGCGGATGTT
GGGGTGGCGATGGGCCGTTCGGGTACTGATATAACGCGGCAGGTCAGTAA
GATATATGTATGCTCCGGATATGCTCTTATCTAACTTGTCCCCACGTCCT
TTCTCACGTCTATATATTATTTCGCATTTCTTTAATCTCACTTCCACCCT
TTTCAACCCCCTTAACCCCAGGCGGCCGACATAATCCTCGCCGACGATAA
CTTCTCTACCATTGTGGTGGCAGTGGCAGAGGGACGAAAGATCATGGATA
ATATCATCAAGTTTTTGGTTTATCTTCTCTCATGCAACCTTTCAGAGGTG
ATTCTGATGCTGGTGGCCGTCTCTGCCGGGTATCCAGAGCCGCTCAACGC
CCTGCAGATTTTGTACGCCAACATTGTTGTGGACATTCCCCCCTCATTGG
CGTTGGGTGCAGAGCAAATTGAACCCGACGCGATGTTTCGCACGCCCCGC
AACCCACAAAAACCAATTCTGGGCAAACGCTACACGTTGGCGCTGATCGT
GCAAGCTTCGTCCATCGGTCTCTTGTCGTTTGGCAGTTATGTAATTTGCC
TGGACGTGGAAAAGTTGTCGTTGGAACAGGCGCGTTCCGAGGCATTTGCT
GTTGTCTTCATAGTACAGTGCGCCCACTCGTTCATGTCTCGTTCCATTCG
AAACTCTCTTCTCACCTCGGGGCCGCGGGAATTATTTTTTGGAAACATGT
GGCTGCTTTGGGGGTGCACCATCTCGGTCCTTGCCGTCGTGGCAGGCATT
TACACCCCGGGGTTCAACAGTATTTTTGGCCTGGTGCCCATCGATGGTCG
CGGTTGGCTCAAGGTCCTGGTGGCCCTGATTGTGCATTTATGCATCGTCG
AGTTTGGAAAGTGGCGCATCCGTCATGTTATACCCAAATCGACCTCGGTA
ACTTCTCCGTTTGGTGGTGAAAGGACGTCAATGCCTCTGGCGCGATTGCC
CGTCGTTGCAGGGGTTGAGAGGGCGATCTCGGGCTCTAAAAAAGTGGAAA
AGACCTTGGCAGGGGCGTCAGTGCCCAGCATAGGAGAGGCAGCAGCCTAA
TCAATTGATCAATAAAGAATTACGTGGCATTTTGATTTTGATAGCTAAAG
CGGGGGTGGAGAAGGCCTTAGCAGCGATGGCGTTGGCGGGCGCGAAGAAG
GACCTTTAAGATTTGTTCAAAGGGACGTTGAAATTCGATAAAGATCTGCG
AGCATGCGCGATGTATTCCATGACAATAAAATGATAAGTGATGCTACCTC
TACTGACGCTGAGCGAGTGAACGAAAGGACAAGTTTATGTTATAAACAAA
TATGTATCAAGAAGTCGATGATCTGTAATTAAAAGAGAAGGAAAAGGGAG
CGGTATCACGAGAAAAGCCGAGCCGTGAATGGAACAGGGGCAATCAAGAA
AAACGAACATTTCGAAGTCTCGATGTGGCTTGTGGGAGATTACCGGTTTA
TTGGCAAGCCCATTGGGCAAGGCGTCTCTTGGACACGTATACCTTGTTCT
CCTTTAAAAATGAATTTATACATGTAAGTCTCCTGGATTTTTTAAA

Coding sequence (CDS) from alignment at scaffold_14:716111..720606+

>mRNA_6178 ID=mRNA_6178|Name=jgi.p|Nanoce1779_2|594037|organism=Nannochloropsis oceanica|type=CDS|length=7620bp|location=Sequence derived from alignment at scaffold_14:716111..720606+ (Nannochloropsis oceanica)
ATGCCCCATCTCAACAACGCCTCTAGCTATGGCGCCAGCACAATGAATCT
GTCCCGTAGCCGAGGGGCGCCGTCCATTTTGAAGAAACAATGCTCCTCTT
ATCGCTTCCATGATGGCACAGCGTCGGTGGAGGAGCACATTGCCTTGTTG
CTCGAGGACTTGATTCGCTACGGATCTCAAGCCACATTATCCGCGGCCGA
AGACATGGTGTTGCGTGAAGCCTTCTTGGGTCTGCATTACGTCTGGCGGA
TGCGCATTCGTGCCAGCTCCATTACAGCTTTTACTCCGGAACTCATGGAA
CGTCTCCGGGGGGCACTGCTTCTCTTTATGGGCCGCGTCAATATGCGGGG
GCCTGTGCCCTTCTTGGCCAAGCCGGTGCCGACCCGGGAAGCAGTTTTTG
CCTTTACTATATTTTGTGGAATGCTCAAGGACGTGATTGCTTTTCGGGAG
GTTGTAAACAATAACATGACGGTTGCAGATCTGCGTCGGGCATTGGCAGT
GCACCTGTGGCTGTCCATCACAGAGGTGGAGGAGGACGAGGGGGCGCCCG
ACGAGGACATCACGAACACGGTGGGCTGGTCTTCCATCAAGTTTTCGGTC
GAGGACATCCGTCGACTGGCGGTTGTGACGGTGCTGTTCTTAACGGGCCT
GCTTAATGCTTGCAACGATTGGGAAGAGCTCGTAGAACCTCGGGCACACG
CCCTCTTCCAAAAGTATCAAAAGGTTGCGCAGGTGGAGAATTACCCAGAC
CGGAAGCCTAAGCCCTTGCTGGCACCAAAGGGCGAGTACTGGGACACGGA
CGTGAAAAAGGTGTTGGGCATGTTTCGGACCCAGGTCGAAAAAGGCCTCA
CCGAGGCCGAGGTACTTGCCCGGAGGGAGGTGTACGGCGACAACCGCACC
CCCCCCATGGCACGGGCGTCGGTGCTGGGTATCCTGTTTCGGCAACTCGC
GGATTTGATTGTGATCATTTTACTGGTCGCCAGCGTTGTCAGTGCCTGTT
TGGGCGACTACAAAACGGCAGTGGTGCTGGGGATTGTGGTCTCGATCAAC
ACGGCAATTGGTTTCTACCAAGAATGGAACGCGGAGCGCGCCATCTCTGC
ATTGGCGTCGCTTTCGGTGCCACAATGCACGGTGATCCGGGGAGGCACAT
CTCGTATGGTGGAAGCGGGTGACCTGGTGCCGGGAGACATTGTGGTGCTG
GATGAAGGGGCTGCCGTACCCGCGGACTTGCGCTTGTGCAGTGTGTCACA
GCTGGCGATCATTGAAACACTCTTGACGGGTGAATCCGTGCCTATGGAGA
AGATCACCGACGCGATCCACGGCTATCGCCGCGTAAATATTGGAGACCGG
ACCAACATGGCTTTCCAGAGCACGGTAGTGAGCCGTGGCCGCGGTGTCGG
TGTAGTGGTAAATACAGGGGAGACCACAGAGATTGGACGCATCAGTGCAG
CCATTGCCGGTACTCACGTGGGGAAAACGCCGTTGCAGAAGAAAATGGAT
GCGCTAGGGAAAATGTTGGTGATGATGGCTATCTTTGCCTGTGGCCTTGT
GGTGGTTGCTGGCATTATCTGGGACCCAAGGGACATGGGTATTATAAAGG
TTGGCATTTCACTTGCTCTCAGCGTTATTCCGGAAGGCTTGGTAGCCATC
GTCACTTTGACCATGGCGCTGGGTATGAAGCGCATGGCCAAGGGAAATGC
TTTGGTTCGACAACTTCCCGCAGTAGAGACGCTCGGCAGCGTCACAACAA
TTTGTTCGGACAAGACCGGGACGATTACTGAGGGGGTCATGCGGGCGCGC
CTTATGTGGGCACCCGAGGGTCATCTCCACATCCCCATGGCCCTTGGGAG
GGAGGGGGCGGCAGGGTTGGGCCTCTCCCGTATGGAAGGCTCCTCTACGC
ATATAGTAGCAACCGCTTTAAGCGCAGCTGTGGGTACCCAGGGGACCGGG
AACGCCAAGCCAGTGCGGGCCGAGAAATTGGTACCAGTGGATGCAGCGGC
ACAGTGGCAGCTTGCAATTATGGCCATTTGCAACAACTCGACGCTTAATG
CTCATCGGGGTATGGATGGCTGCTTCACGGGGATTGGGGACCAAACAGAG
GTAGCGCTCAAGGTTTTAGCTGTCGAGACAGGCTTATCTTGGCCCGAGAC
TCGTTTAAAGCGGGGAGCCGAGATCGCGTTCGACTCGGACCGAAAACGCA
TGTCGGTGGTGTGCTCGGTTATGCACGAGTCTGAGGATGGGCCGGTAGAA
TTGGGCAACTGCACGGGAACCTCCCGGTTGGTTTTGTCCAAGGGCGCACC
CGAAGTTGTCCTGGGGTTGTGTTCGGAATGGATGGGCACCGATGGCAAGA
CAAACAAAATGGATGCCACCAAACTTAAGGAGGTCGATGCTTGGTGCGAC
GCCTTTTCCGCCCAGGGCTTGCGTACGTTGGCGTTGGCAATGCGTTTCGA
TGATTCGGGCAACCTGGTTGATGACGTGGGGCTGGATGAGGAGAAGGTGG
AGGTGGCGCTTGTTTTTGTAGGGCTTGTGGCATTGGCCGACCCCCCTCGC
AAAGGTATTGAGCAGTCCATCAAGGCCTGTCACGATGCAGGTATTCGTGT
GGTGATGATCACGGGCGATCATGTTCGCACAGCCACATCGATTGCTCAGT
CTGTAGGTATTTTGGATGTGTCCGAGGATGAAGGGGGGTCATTGGTGCTG
AACGGCTCGGCGCTCTCTTCCATGACGGTGGAGCAGCTTGCCATCCTGGA
CCCTTTCCCCGTAGTTTTTTCTCGCGTCTCGCCCGACAACAAATTGAATA
TTGTTAAGGCCCTGCAAATGCGCGGGGACGTGGTGGCCATGACGGGCGAT
GGCGTGAATGATGCTCCGGCGATTCGTCAGGCGGATGTTGGGGTGGCGAT
GGGCCGTTCGGGTACTGATATAACGCGGCAGGCGGCCGACATAATCCTCG
CCGACGATAACTTCTCTACCATTGTGGTGGCAGTGGCAGAGGGACGAAAG
ATCATGGATAATATCATCAAGTTTTTGGTTTATCTTCTCTCATGCAACCT
TTCAGAGGTGATTCTGATGCTGGTGGCCGTCTCTGCCGGGTATCCAGAGC
CGCTCAACGCCCTGCAGATTTTGTACGCCAACATTGTTGTGGACATTCCC
CCCTCATTGGCGTTGGGTGCAGAGCAAATTGAACCCGACGCGATGTTTCG
CACGCCCCGCAACCCACAAAAACCAATTCTGGGCAAACGCTACACGTTGG
CGCTGATCGTGCAAGCTTCGTCCATCGGTCTCTTGTCGTTTGGCAGTTAT
GTAATTTGCCTGGACGTGGAAAAGTTGTCGTTGGAACAGGCGCGTTCCGA
GGCATTTGCTGTTGTCTTCATAGTACAGTGCGCCCACTCGTTCATGTCTC
GTTCCATTCGAAACTCTCTTCTCACCTCGGGGCCGCGGGAATTATTTTTT
GGAAACATGTGGCTGCTTTGGGGGTGCACCATCTCGGTCCTTGCCGTCGT
GGCAGGCATTTACACCCCGGGGTTCAACAGTATTTTTGGCCTGGTGCCCA
TCGATGGTCGCGGTTGGCTCAAGGTCCTGGTGGCCCTGATTGTGCATTTA
TGCATCGTCGAGTTTGGAAAGTGGCGCATCCGTCATGTTATACCCAAATC
GACCTCGGTAACTTCTCCGTTTGGTGGTGAAAGGACGTCAATGCCTCTGG
CGCGATTGCCCGTCGTTGCAGGGGTTGAGAGGGCGATCTCGGGCTCTAAA
AAAGTGGAAAAGACCTTGGCAGGGGCGTCAGTGCCCAGCATAGGAGAGGC
AGCAGCCTAAATGCCCCATCTCAACAACGCCTCTAGCTATGGCGCCAGCA
CAATGAATCTGTCCCGTAGCCGAGGGGCGCCGTCCATTTTGAAGAAACAA
TGCTCCTCTTATCGCTTCCATGATGGCACAGCGTCGGTGGAGGAGCACAT
TGCCTTGTTGCTCGAGGACTTGATTCGCTACGGATCTCAAGCCACATTAT
CCGCGGCCGAAGACATGGTGTTGCGTGAAGCCTTCTTGGGTCTGCATTAC
GTCTGGCGGATGCGCATTCGTGCCAGCTCCATTACAGCTTTTACTCCGGA
ACTCATGGAACGTCTCCGGGGGGCACTGCTTCTCTTTATGGGCCGCGTCA
ATATGCGGGGGCCTGTGCCCTTCTTGGCCAAGCCGGTGCCGACCCGGGAA
GCAGTTTTTGCCTTTACTATATTTTGTGGAATGCTCAAGGACGTGATTGC
TTTTCGGGAGGTTGTAAACAATAACATGACGGTTGCAGATCTGCGTCGGG
CATTGGCAGTGCACCTGTGGCTGTCCATCACAGAGGTGGAGGAGGACGAG
GGGGCGCCCGACGAGGACATCACGAACACGGTGGGCTGGTCTTCCATCAA
GTTTTCGGTCGAGGACATCCGTCGACTGGCGGTTGTGACGGTGCTGTTCT
TAACGGGCCTGCTTAATGCTTGCAACGATTGGGAAGAGCTCGTAGAACCT
CGGGCACACGCCCTCTTCCAAAAGTATCAAAAGGTTGCGCAGGTGGAGAA
TTACCCAGACCGGAAGCCTAAGCCCTTGCTGGCACCAAAGGGCGAGTACT
GGGACACGGACGTGAAAAAGGTGTTGGGCATGTTTCGGACCCAGGTCGAA
AAAGGCCTCACCGAGGCCGAGGTACTTGCCCGGAGGGAGGTGTACGGCGA
CAACCGCACCCCCCCCATGGCACGGGCGTCGGTGCTGGGTATCCTGTTTC
GGCAACTCGCGGATTTGATTGTGATCATTTTACTGGTCGCCAGCGTTGTC
AGTGCCTGTTTGGGCGACTACAAAACGGCAGTGGTGCTGGGGATTGTGGT
CTCGATCAACACGGCAATTGGTTTCTACCAAGAATGGAACGCGGAGCGCG
CCATCTCTGCATTGGCGTCGCTTTCGGTGCCACAATGCACGGTGATCCGG
GGAGGCACATCTCGTATGGTGGAAGCGGGTGACCTGGTGCCGGGAGACAT
TGTGGTGCTGGATGAAGGGGCTGCCGTACCCGCGGACTTGCGCTTGTGCA
GTGTGTCACAGCTGGCGATCATTGAAACACTCTTGACGGGTGAATCCGTG
CCTATGGAGAAGATCACCGACGCGATCCACGGCTATCGCCGCGTAAATAT
TGGAGACCGGACCAACATGGCTTTCCAGAGCACGGTAGTGAGCCGTGGCC
GCGGTGTCGGTGTAGTGGTAAATACAGGGGAGACCACAGAGATTGGACGC
ATCAGTGCAGCCATTGCCGGTACTCACGTGGGGAAAACGCCGTTGCAGAA
GAAAATGGATGCGCTAGGGAAAATGTTGGTGATGATGGCTATCTTTGCCT
GTGGCCTTGTGGTGGTTGCTGGCATTATCTGGGACCCAAGGGACATGGGT
ATTATAAAGGTTGGCATTTCACTTGCTCTCAGCGTTATTCCGGAAGGCTT
GGTAGCCATCGTCACTTTGACCATGGCGCTGGGTATGAAGCGCATGGCCA
AGGGAAATGCTTTGGTTCGACAACTTCCCGCAGTAGAGACGCTCGGCAGC
GTCACAACAATTTGTTCGGACAAGACCGGGACGATTACTGAGGGGGTCAT
GCGGGCGCGCCTTATGTGGGCACCCGAGGGTCATCTCCACATCCCCATGG
CCCTTGGGAGGGAGGGGGCGGCAGGGTTGGGCCTCTCCCGTATGGAAGGC
TCCTCTACGCATATAGTAGCAACCGCTTTAAGCGCAGCTGTGGGTACCCA
GGGGACCGGGAACGCCAAGCCAGTGCGGGCCGAGAAATTGGTACCAGTGG
ATGCAGCGGCACAGTGGCAGCTTGCAATTATGGCCATTTGCAACAACTCG
ACGCTTAATGCTCATCGGGGTATGGATGGCTGCTTCACGGGGATTGGGGA
CCAAACAGAGGTAGCGCTCAAGGTTTTAGCTGTCGAGACAGGCTTATCTT
GGCCCGAGACTCGTTTAAAGCGGGGAGCCGAGATCGCGTTCGACTCGGAC
CGAAAACGCATGTCGGTGGTGTGCTCGGTTATGCACGAGTCTGAGGATGG
GCCGGTAGAATTGGGCAACTGCACGGGAACCTCCCGGTTGGTTTTGTCCA
AGGGCGCACCCGAAGTTGTCCTGGGGTTGTGTTCGGAATGGATGGGCACC
GATGGCAAGACAAACAAAATGGATGCCACCAAACTTAAGGAGGTCGATGC
TTGGTGCGACGCCTTTTCCGCCCAGGGCTTGCGTACGTTGGCGTTGGCAA
TGCGTTTCGATGATTCGGGCAACCTGGTTGATGACGTGGGGCTGGATGAG
GAGAAGGTGGAGGTGGCGCTTGTTTTTGTAGGGCTTGTGGCATTGGCCGA
CCCCCCTCGCAAAGGTATTGAGCAGTCCATCAAGGCCTGTCACGATGCAG
GTATTCGTGTGGTGATGATCACGGGCGATCATGTTCGCACAGCCACATCG
ATTGCTCAGTCTGTAGGTATTTTGGATGTGTCCGAGGATGAAGGGGGGTC
ATTGGTGCTGAACGGCTCGGCGCTCTCTTCCATGACGGTGGAGCAGCTTG
CCATCCTGGACCCTTTCCCCGTAGTTTTTTCTCGCGTCTCGCCCGACAAC
AAATTGAATATTGTTAAGGCCCTGCAAATGCGCGGGGACGTGGTGGCCAT
GACGGGCGATGGCGTGAATGATGCTCCGGCGATTCGTCAGGCGGATGTTG
GGGTGGCGATGGGCCGTTCGGGTACTGATATAACGCGGCAGGCGGCCGAC
ATAATCCTCGCCGACGATAACTTCTCTACCATTGTGGTGGCAGTGGCAGA
GGGACGAAAGATCATGGATAATATCATCAAGTTTTTGGTTTATCTTCTCT
CATGCAACCTTTCAGAGGTGATTCTGATGCTGGTGGCCGTCTCTGCCGGG
TATCCAGAGCCGCTCAACGCCCTGCAGATTTTGTACGCCAACATTGTTGT
GGACATTCCCCCCTCATTGGCGTTGGGTGCAGAGCAAATTGAACCCGACG
CGATGTTTCGCACGCCCCGCAACCCACAAAAACCAATTCTGGGCAAACGC
TACACGTTGGCGCTGATCGTGCAAGCTTCGTCCATCGGTCTCTTGTCGTT
TGGCAGTTATGTAATTTGCCTGGACGTGGAAAAGTTGTCGTTGGAACAGG
CGCGTTCCGAGGCATTTGCTGTTGTCTTCATAGTACAGTGCGCCCACTCG
TTCATGTCTCGTTCCATTCGAAACTCTCTTCTCACCTCGGGGCCGCGGGA
ATTATTTTTTGGAAACATGTGGCTGCTTTGGGGGTGCACCATCTCGGTCC
TTGCCGTCGTGGCAGGCATTTACACCCCGGGGTTCAACAGTATTTTTGGC
CTGGTGCCCATCGATGGTCGCGGTTGGCTCAAGGTCCTGGTGGCCCTGAT
TGTGCATTTATGCATCGTCGAGTTTGGAAAGTGGCGCATCCGTCATGTTA
TACCCAAATCGACCTCGGTAACTTCTCCGTTTGGTGGTGAAAGGACGTCA
ATGCCTCTGGCGCGATTGCCCGTCGTTGCAGGGGTTGAGAGGGCGATCTC
GGGCTCTAAAAAAGTGGAAAAGACCTTGGCAGGGGCGTCAGTGCCCAGCA
TAGGAGAGGCAGCAGCCTAA

Synonyms

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