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Properties
| Property Name | Value |
|---|
| TranscriptId | 186199 |
| Track | FilteredModels2 |
| ProteinId | 186113 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_23 | supercontig | scaffold_23:39697..42064 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8203 ID=mRNA_8203|Name=jgi.p|Nanoce1779_2|186113|organism=Nannochloropsis oceanica|type=mRNA|length=1199bp
TGCTTGTGTGATACTGAGATGGGACCCTCTATTGATTTGTGCATGTGCGC
GTGGCCCTTCGAGCACCCGGTACCATATATGTATATTTTGCTCAATATTT
GTCACAATTATGGCATTGTGGTTGGGCTGTGCCTGTGGATGCACTTGGTA
CATTTAATGGAAAGGGACAATGGATGACCTCCCCACCCCCGAAGCAACAG
ACACAGCAACGCGTTGCTTCTTCCTTCCACTTTTCCCCTCATGTCACTAC
ACACTGTCATGTTTCTCACTCCACTCCCTTGTCTGCCGCTACCCCTGCTA
GGTATAGACACCATGGCGGCCCTGGATGAGCTCCAGGAGCTGTCGCTGGT
GTCCAAGATTTGCACGGAGCTGGACAGTCACTTGGGTTTGGCAGATAAGA
CGCTGGCCGAGTTTATCATCCATTTAGCTGAGAGTCACGGAGACCCGATG
TCGTTCCGCTCAGCCCTGGACCAGAACGGCGCGGAGTTTCCCCAGACACT
CTCTGACAAGCTTTTCCACCTCATCAAGGCCATGAGGCCTATCAAAAGCG
GGCGGAAAAGGGCTTATAATGGAGGCGGTGACGACGACGGGGAAGAGCAC
CAGCATGTAGAGCCACGCCAAGCACGGAATGAGAACGAGGCGGCGTTTCC
TGGACTAAGGCTCCAAAACACGAGCCGATCCACGCTCTACCTTCCGGACG
TGGCGATGGTAGGGACTGGGGAAAGTCTTGACCGTCTGAAGGCAAAGGGC
GTGAAGGAGGAGGAGGTTGTGAAGAAGGAGGAAGAGGAGGAGGAGGAGGA
GGAGGATCGGAATGGGAAGAGGAAAAGGGAGGAGAGGGGGAGGGAAGAGG
AGGAGCGTCAGGCCAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGA
GGGAGGGGTCGCGGGCAAAGCCGGGAGAGAGATGGTGACCGGCGCGACAG
GGACAACGACCGAGACTACTCTCGAGGCCGTGGTAGGGACAGTGGTAGGC
ACCGGAGGGAGGGAGGGAGCGATCGCGTTCCCCTCCCTCTCGTGCCGCGG
CCGAATTGGAGCTGTATGGGATTTATGACGGAAAGGTAACAAAGGTGATG
GATTTCGGATGCTTTGTGGAGCTGGAAGGTGTCAAAGGACAGCTCCGGGA
GGGGCTCGTCCACGTCGGGCAGATCCAGCAGGGCATGCTTCGAGACCCC back to topprotein sequence of jgi.p|Nanoce1779_2|186113 >mRNA_8203-protein ID=mRNA_8203-protein|Name=jgi.p|Nanoce1779_2|186113|organism=Nannochloropsis oceanica|type=polypeptide|length=283bp
MSLHTVMFLTPLPCLPLPLLGIDTMAALDELQELSLVSKICTELDSHLGL
ADKTLAEFIIHLAESHGDPMSFRSALDQNGAEFPQTLSDKLFHLIKAMRP
IKSGRKRAYNGGGDDDGEEHQHVEPRQARNENEAAFPGLRLQNTSRSTLY
LPDVAMVGTGESLDRLKAKGVKEEEVVKKEEEEEEEEEDRNGKRKREERG
REEEERQARREGGREGGREGGRGRGQSRERDGDRRDRDNDRDYSRGRGRD
SGRHRREGGSDRVPLPLVPRPNWSCMGFMTER* back to topmRNA from alignment at scaffold_23:39697..42064- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8203 ID=mRNA_8203|Name=jgi.p|Nanoce1779_2|186113|organism=Nannochloropsis oceanica|type=mRNA|length=2368bp|location=Sequence derived from alignment at scaffold_23:39697..42064- (Nannochloropsis oceanica)
TGCTTGTGTGATACTGAGATGGGACCCTCTATTGATTTGTGCATGTGCGC
GTGGCCCTTCGAGCACCCGGTACCATATATGTATATTTTGCTCAATATTT
GTCACAATTATGGCATTGTGGTTGGGCTGTGCCTGTGGATGCACTTGGTA
CATTTAATGGAAAGGGACAATGGATGACCTCCCCACCCCCGAAGCAACAG
ACACAGCAACGCGTTGCTTCTTCCTTCCACTTTTCCCCTCATGTCACTAC
ACACTGTCATGTTTCTCACTCCACTCCCTTGTCTGCCGCTACCCCTGCTA
GGTATAGACACCATGGCGGCCCTGGATGAGCTCCAGGAGCTGTCGCTGGT
GTCCAAGATTTGCACGGAGCTGGACAGTCACTTGGGTTTGGCAGATAAGA
CGCTGGCCGAGTTTATCATCCATTTAGCTGAGAGTCACGGAGACCCGATG
GTACGTCCGCATGTGGTGCAAGAGGGGGAGGAGCAGGAAGGGAAGTGAGA
GTGGGAAGGGGAGGAGGGGGGATAGGATACGGGTGTGGCCGATGGGTTTG
TGGGAGTGCGTTGTGAAATGCAAGGTGGTAGGAGGGTAGGAAGCATTGAG
GATAAATAGGGCTTGGCAGACATGTACATTCCCTGTGTTAGGGTTATGCC
ATAACGTCAAAGAGTACGGCTTCATCCCTTTACTCACCCTTATGCTCCCG
CCCTCCCTCCCTTCCTTCCCTACAGTCGTTCCGCTCAGCCCTGGACCAGA
ACGGCGCGGAGTTTCCCCAGACACTCTCTGACAAGCTTTTCCACCTCATC
AAGGCCATGAGGCCTATCAAAAGCGGGCGGAAAAGGGCTTATAATGGAGG
CGGTGACGACGACGGGGAAGAGCACCAGCATGTAGAGCCACGCCAAGCAC
GGAATGAGAACGAGGCGGCGTTTCCTGGACTAAGGTCAGCAGTGGCCCTT
CCTTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCC
TTCCCTCCCTCCTTTCCTCCCTCCCCTTCGCTCATTCCTTACTCCTTTCT
ATTTCTTTAGGCTCCAAAACACGAGCCGATCCACGCTCTACCTTCCGGAC
GTGGCGATGGTAGGGACTGGGGAAAGTCTTGACCGTCTGAAGGCAAAGGG
CGTGAAGGAGGAGGAGGTTGTGAAGAAGGAGGAAGAGGAGGAGGAGGAGG
AGGAGGATCGGAATGGGAAGAGGAAAAGGGAGGAGAGGGGGAGGGAAGAG
GAGGAGCGTCAGGCCAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGG
AGGGAGGGGTCGCGGGCAAAGCCGGGAGAGAGATGGTGACCGGCGCGACA
GGGACAACGACCGAGGTACATACTAGTGGTGCCCTTCCTCTCTTCCTCCC
TCCTTCCCTCCCTCCCTCCCTTTCTCCTTCCATCCCTACCTCTTGCCATC
CTTTTCTCCCTGCTGTTCAACATCCTCCCCCTCCCCCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCATTTTGTCAACACCA
ACAGACTACTCTCGAGGCCGTGGTAGGGACAGTGGTAGGCACCGCTCAAG
GGAGAGGGACGATGGAGATCATCGAAGGAGGGAGGGAGGGAAGGAGAGGG
AGAGGGAGAGGGAGCAGGGAAGAGGGAACAGGCGACGTCATTCCTCCCGC
TCGCGGTCTTGTTCACCGTCTCGGGGGGAGAGGGAGGGAGGAAGGGAGGG
AGGGAGGGGGCGGTCGTCACGGTGGGACGACCAGGACAGGAATAGCGTGT
CGTCTTCCTCCTCTTCACGCTATGGAGGGAGGGAGGGAGGGAGGGAGCGA
TCGCGTTCCCCTCCCTCTCGTGCCGCGGCCGAATTGGAGCTGTATGGGAT
TTATGACGGAAAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGATA
TACCTGTGCGGCCCATACACACACAGATGCCTACTTCATCCTCCCTCCCT
CCCTCCCTCCCTCTTTCCCTCCTTTTCTCCCTCCCCCCCCTCCTTTCCTC
AGGTAACAAAGGTGATGGATTTCGGATGCTTTGTGGAGCTGGAAGGTGTC
AAAGGACAGCTCCGGGAGGGGCTCGTCCACGTCGGGCAGATCCAGCAGGT
GCGCCCTCCTTCCCTCCTTTCCTCCTTTCCTTCTTCCCATCTTCGTTTCC
TCTCCTGCTGTCCCCCTCTCTTCCTTTCCCTCATTCCACCTTTTCTTCTT
CTATCCTTCCCTCCTTCCGTAAATCAAACACTCGCACAATGATTTCTGAC
CACCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCCAG
GGCATGCTTCGAGACCCC back to topCoding sequence (CDS) from alignment at scaffold_23:39697..42064- >mRNA_8203 ID=mRNA_8203|Name=jgi.p|Nanoce1779_2|186113|organism=Nannochloropsis oceanica|type=CDS|length=5094bp|location=Sequence derived from alignment at scaffold_23:39697..42064- (Nannochloropsis oceanica)
GTAAGGAGGGAGGGAGGGAGCGATCGCGTTCCCCTCCCTCTCGTGCCGCG
GCCGAATTGGAGCTGTATGGGATTTATGACGGAAAGACTACTCTCGAGGC
CGTGGTAGGGACAGTGGTAGGCACCGCTCCAAAACACGAGCCGATCCACG
CTCTACCTTCCGGACGTGGCGATGGTAGGGACTGGGGAAAGTCTTGACCG
TCTGAAGGCAAAGGGCGTGAAGGAGGAGGAGGTTGTGAAGAAGGAGGAAG
AGGAGGAGGAGGAGGAGGAGGATCGGAATGGGAAGAGGAAAAGGGAGGAG
AGGGGGAGGGAAGAGGAGGAGCGTCAGGCCAGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAAGGAGGGAGGGGTCGCGGGCAAAGCCGGGAGAGAGATG
GTGACCGGCGCGACAGGGACAACGACCGAGTCGTTCCGCTCAGCCCTGGA
CCAGAACGGCGCGGAGTTTCCCCAGACACTCTCTGACAAGCTTTTCCACC
TCATCAAGGCCATGAGGCCTATCAAAAGCGGGCGGAAAAGGGCTTATAAT
GGAGGCGGTGACGACGACGGGGAAGAGCACCAGCATGTAGAGCCACGCCA
AGCACGGAATGAGAACGAGGCGGCGTTTCCTGGACTAAGATGTCACTACA
CACTGTCATGTTTCTCACTCCACTCCCTTGTCTGCCGCTACCCCTGCTAG
GTATAGACACCATGGCGGCCCTGGATGAGCTCCAGGAGCTGTCGCTGGTG
TCCAAGATTTGCACGGAGCTGGACAGTCACTTGGGTTTGGCAGATAAGAC
GCTGGCCGAGTTTATCATCCATTTAGCTGAGAGTCACGGAGACCCGATGG
TAAGGAGGGAGGGAGGGAGCGATCGCGTTCCCCTCCCTCTCGTGCCGCGG
CCGAATTGGAGCTGTATGGGATTTATGACGGAAAGACTACTCTCGAGGCC
GTGGTAGGGACAGTGGTAGGCACCGCTCCAAAACACGAGCCGATCCACGC
TCTACCTTCCGGACGTGGCGATGGTAGGGACTGGGGAAAGTCTTGACCGT
CTGAAGGCAAAGGGCGTGAAGGAGGAGGAGGTTGTGAAGAAGGAGGAAGA
GGAGGAGGAGGAGGAGGAGGATCGGAATGGGAAGAGGAAAAGGGAGGAGA
GGGGGAGGGAAGAGGAGGAGCGTCAGGCCAGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAAGGAGGGAGGGGTCGCGGGCAAAGCCGGGAGAGAGATGG
TGACCGGCGCGACAGGGACAACGACCGAGTCGTTCCGCTCAGCCCTGGAC
CAGAACGGCGCGGAGTTTCCCCAGACACTCTCTGACAAGCTTTTCCACCT
CATCAAGGCCATGAGGCCTATCAAAAGCGGGCGGAAAAGGGCTTATAATG
GAGGCGGTGACGACGACGGGGAAGAGCACCAGCATGTAGAGCCACGCCAA
GCACGGAATGAGAACGAGGCGGCGTTTCCTGGACTAAGATGTCACTACAC
ACTGTCATGTTTCTCACTCCACTCCCTTGTCTGCCGCTACCCCTGCTAGG
TATAGACACCATGGCGGCCCTGGATGAGCTCCAGGAGCTGTCGCTGGTGT
CCAAGATTTGCACGGAGCTGGACAGTCACTTGGGTTTGGCAGATAAGACG
CTGGCCGAGTTTATCATCCATTTAGCTGAGAGTCACGGAGACCCGATGGT
AAGGAGGGAGGGAGGGAGCGATCGCGTTCCCCTCCCTCTCGTGCCGCGGC
CGAATTGGAGCTGTATGGGATTTATGACGGAAAGACTACTCTCGAGGCCG
TGGTAGGGACAGTGGTAGGCACCGCTCCAAAACACGAGCCGATCCACGCT
CTACCTTCCGGACGTGGCGATGGTAGGGACTGGGGAAAGTCTTGACCGTC
TGAAGGCAAAGGGCGTGAAGGAGGAGGAGGTTGTGAAGAAGGAGGAAGAG
GAGGAGGAGGAGGAGGAGGATCGGAATGGGAAGAGGAAAAGGGAGGAGAG
GGGGAGGGAAGAGGAGGAGCGTCAGGCCAGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAAGGAGGGAGGGGTCGCGGGCAAAGCCGGGAGAGAGATGGT
GACCGGCGCGACAGGGACAACGACCGAGTCGTTCCGCTCAGCCCTGGACC
AGAACGGCGCGGAGTTTCCCCAGACACTCTCTGACAAGCTTTTCCACCTC
ATCAAGGCCATGAGGCCTATCAAAAGCGGGCGGAAAAGGGCTTATAATGG
AGGCGGTGACGACGACGGGGAAGAGCACCAGCATGTAGAGCCACGCCAAG
CACGGAATGAGAACGAGGCGGCGTTTCCTGGACTAAGATGTCACTACACA
CTGTCATGTTTCTCACTCCACTCCCTTGTCTGCCGCTACCCCTGCTAGGT
ATAGACACCATGGCGGCCCTGGATGAGCTCCAGGAGCTGTCGCTGGTGTC
CAAGATTTGCACGGAGCTGGACAGTCACTTGGGTTTGGCAGATAAGACGC
TGGCCGAGTTTATCATCCATTTAGCTGAGAGTCACGGAGACCCGATGGTA
AGGAGGGAGGGAGGGAGCGATCGCGTTCCCCTCCCTCTCGTGCCGCGGCC
GAATTGGAGCTGTATGGGATTTATGACGGAAAGACTACTCTCGAGGCCGT
GGTAGGGACAGTGGTAGGCACCGCTCCAAAACACGAGCCGATCCACGCTC
TACCTTCCGGACGTGGCGATGGTAGGGACTGGGGAAAGTCTTGACCGTCT
GAAGGCAAAGGGCGTGAAGGAGGAGGAGGTTGTGAAGAAGGAGGAAGAGG
AGGAGGAGGAGGAGGAGGATCGGAATGGGAAGAGGAAAAGGGAGGAGAGG
GGGAGGGAAGAGGAGGAGCGTCAGGCCAGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAAGGAGGGAGGGGTCGCGGGCAAAGCCGGGAGAGAGATGGTG
ACCGGCGCGACAGGGACAACGACCGAGTCGTTCCGCTCAGCCCTGGACCA
GAACGGCGCGGAGTTTCCCCAGACACTCTCTGACAAGCTTTTCCACCTCA
TCAAGGCCATGAGGCCTATCAAAAGCGGGCGGAAAAGGGCTTATAATGGA
GGCGGTGACGACGACGGGGAAGAGCACCAGCATGTAGAGCCACGCCAAGC
ACGGAATGAGAACGAGGCGGCGTTTCCTGGACTAAGATGTCACTACACAC
TGTCATGTTTCTCACTCCACTCCCTTGTCTGCCGCTACCCCTGCTAGGTA
TAGACACCATGGCGGCCCTGGATGAGCTCCAGGAGCTGTCGCTGGTGTCC
AAGATTTGCACGGAGCTGGACAGTCACTTGGGTTTGGCAGATAAGACGCT
GGCCGAGTTTATCATCCATTTAGCTGAGAGTCACGGAGACCCGATGGTAA
GGAGGGAGGGAGGGAGCGATCGCGTTCCCCTCCCTCTCGTGCCGCGGCCG
AATTGGAGCTGTATGGGATTTATGACGGAAAGACTACTCTCGAGGCCGTG
GTAGGGACAGTGGTAGGCACCGCTCCAAAACACGAGCCGATCCACGCTCT
ACCTTCCGGACGTGGCGATGGTAGGGACTGGGGAAAGTCTTGACCGTCTG
AAGGCAAAGGGCGTGAAGGAGGAGGAGGTTGTGAAGAAGGAGGAAGAGGA
GGAGGAGGAGGAGGAGGATCGGAATGGGAAGAGGAAAAGGGAGGAGAGGG
GGAGGGAAGAGGAGGAGCGTCAGGCCAGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAAGGAGGGAGGGGTCGCGGGCAAAGCCGGGAGAGAGATGGTGA
CCGGCGCGACAGGGACAACGACCGAGTCGTTCCGCTCAGCCCTGGACCAG
AACGGCGCGGAGTTTCCCCAGACACTCTCTGACAAGCTTTTCCACCTCAT
CAAGGCCATGAGGCCTATCAAAAGCGGGCGGAAAAGGGCTTATAATGGAG
GCGGTGACGACGACGGGGAAGAGCACCAGCATGTAGAGCCACGCCAAGCA
CGGAATGAGAACGAGGCGGCGTTTCCTGGACTAAGATGTCACTACACACT
GTCATGTTTCTCACTCCACTCCCTTGTCTGCCGCTACCCCTGCTAGGTAT
AGACACCATGGCGGCCCTGGATGAGCTCCAGGAGCTGTCGCTGGTGTCCA
AGATTTGCACGGAGCTGGACAGTCACTTGGGTTTGGCAGATAAGACGCTG
GCCGAGTTTATCATCCATTTAGCTGAGAGTCACGGAGACCCGATGGTAAG
GAGGGAGGGAGGGAGCGATCGCGTTCCCCTCCCTCTCGTGCCGCGGCCGA
ATTGGAGCTGTATGGGATTTATGACGGAAAGACTACTCTCGAGGCCGTGG
TAGGGACAGTGGTAGGCACCGCTCCAAAACACGAGCCGATCCACGCTCTA
CCTTCCGGACGTGGCGATGGTAGGGACTGGGGAAAGTCTTGACCGTCTGA
AGGCAAAGGGCGTGAAGGAGGAGGAGGTTGTGAAGAAGGAGGAAGAGGAG
GAGGAGGAGGAGGAGGATCGGAATGGGAAGAGGAAAAGGGAGGAGAGGGG
GAGGGAAGAGGAGGAGCGTCAGGCCAGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAAGGAGGGAGGGGTCGCGGGCAAAGCCGGGAGAGAGATGGTGAC
CGGCGCGACAGGGACAACGACCGAGTCGTTCCGCTCAGCCCTGGACCAGA
ACGGCGCGGAGTTTCCCCAGACACTCTCTGACAAGCTTTTCCACCTCATC
AAGGCCATGAGGCCTATCAAAAGCGGGCGGAAAAGGGCTTATAATGGAGG
CGGTGACGACGACGGGGAAGAGCACCAGCATGTAGAGCCACGCCAAGCAC
GGAATGAGAACGAGGCGGCGTTTCCTGGACTAAGATGTCACTACACACTG
TCATGTTTCTCACTCCACTCCCTTGTCTGCCGCTACCCCTGCTAGGTATA
GACACCATGGCGGCCCTGGATGAGCTCCAGGAGCTGTCGCTGGTGTCCAA
GATTTGCACGGAGCTGGACAGTCACTTGGGTTTGGCAGATAAGACGCTGG
CCGAGTTTATCATCCATTTAGCTGAGAGTCACGGAGACCCGATG back to top
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