|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 603101 |
| Track | FilteredModels2 |
| ProteinId | 603015 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:150505..152378 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8537 ID=mRNA_8537|Name=jgi.p|Nanoce1779_2|603015|organism=Nannochloropsis oceanica|type=mRNA|length=1207bp
ACAGGCAAGCAGCCACAAGACGCCATTTTGATACTGCGAGCTGTAATACC
GCATATTAATGCTGCCACGCCTATTGGTCCGGGCGAGGGGCACCCTCCAC
CTTTGCAGCCCACGGTCACGGTGGTTGTCTTCGGGGCCGGTCAGGGGCGA
AGCCAAGCAGGAAGGTCTGACGCGGACTAAACAACCCGCTTTCTCCTTTT
CAGGCGCGGGCTTCCTCTCACCATTCCATATAGGAGTTGTGCAAGCTTTG
CAAGAAAAAGGCATCATCACTTCTCAGACCAAGCTGGCAGGCGCCTCGGG
TGGTGCTCTCGTGGCAGGGTCCACAGTGTGTGGCCTCACTCCAGCAGAGC
AGATGGCGGCTTATAAAGAAATGGCTGGCGTGTGTCGAGCCGCGGGTTTT
TTGGGGAAGGTCCGACGAGTGCTGCGCAGGAGTCTAGAGGCCCGCTTGCC
TGAGGATGCGCACGAAGTGGCCAATCGACGGCTCACTATCGCCGTTATGC
GCGTCTGGCCCGCATTCCAATTCCAACCGGAGCTCCTCGAACACTTTCAC
TCCCGCCAAGACTTGCTCGACTCTCTTATGACCTCGTCACACGTCCCACT
CTACCTCGACGCCGAACAGCCATTTTGGACTAAATTTCGCACGGGGTTGT
ATGTGGATGGAGGGCTGATCAACCTCGTGCCGCCGGTGCCGGGTTCGATC
AAGGTGTGCGTCTTCCCCGGCCACTTTCTCCTCCGGGATGACCTGCACGT
CACCCCCCACCTCCTCGGCAAGAGCTACCCCTTCTCATTTCAACAAATCA
TTAAATGGGCATTCGTGGCACCACCTGACGACGTTGCAGACGAATTGCAG
CGCATGGGGCACCAAGCAGCGGTAGAGTGGGCCAAGACGGGCGGGATCGA
GGAAGGGAGGGAGATAGATTTGGCCGAAGCGGTGGAGCCGGATAAGTCGG
TGGGTACGTCTTTCGTACGATCCGGGCATGTGGTGGGTTTGAGTACCAGT
AATGGTGGTAGCAACACGAATAACAACGATATGTGTGAGGAGAAAGAACA
GCACGCCCACGGGGACACGAAAAAGAAAGGAAACTGCGAAGCATTGAACA
AAGTAACCGACAACAAGAACAACTGACTCTCATGCACAAATTAAATGCAG
AGATGTATAGAAGAGGCCAATGATGCAAAAAGGAAAAAAGACGCCAAACA
ATGTAAA back to topprotein sequence of jgi.p|Nanoce1779_2|603015 >mRNA_8537-protein ID=mRNA_8537-protein|Name=jgi.p|Nanoce1779_2|603015|organism=Nannochloropsis oceanica|type=polypeptide|length=356bp
MLPRLLVRARGTLHLCSPRSRWLSSGPVRGEAKQEGLTRTKQPAFSFSGA
GFLSPFHIGVVQALQEKGIITSQTKLAGASGGALVAGSTVCGLTPAEQMA
AYKEMAGVCRAAGFLGKVRRVLRRSLEARLPEDAHEVANRRLTIAVMRVW
PAFQFQPELLEHFHSRQDLLDSLMTSSHVPLYLDAEQPFWTKFRTGLYVD
GGLINLVPPVPGSIKVCVFPGHFLLRDDLHVTPHLLGKSYPFSFQQIIKW
AFVAPPDDVADELQRMGHQAAVEWAKTGGIEEGREIDLAEAVEPDKSVGT
SFVRSGHVVGLSTSNGGSNTNNNDMCEEKEQHAHGDTKKKGNCEALNKVT
DNKNN* back to topmRNA from alignment at scaffold_26:150505..152378- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8537 ID=mRNA_8537|Name=jgi.p|Nanoce1779_2|603015|organism=Nannochloropsis oceanica|type=mRNA|length=1874bp|location=Sequence derived from alignment at scaffold_26:150505..152378- (Nannochloropsis oceanica)
ACAGGCAAGCAGCCACAAGACGCCATTTTGATACTGCGAGCTGTAATACC
GCATATTAATGCTGCCACGCCTATTGGTCCGGGCGAGGGGCACCCTCCAC
CTTTGCAGCCCACGGTCACGGTGGTTGTCTTCGGGGCCGGTCAGGGGCGA
AGCCAAGCAGGAAGGTCTGACGCGGACTAAACAACCCGCTTTCTCCTTTT
CAGGTGTGTTGGACGGGCAAAATGAGCGCAGGAGGGAGGAAAATGAGGGT
GGGAGGGAGGAGCGCATCGGCCGGTGAATGGACGGAAGGAGCAGGTAGTT
TTTGGTAATTTATTGGAGGGTAAAAACGGGAGGTGAGGGACACTTGTCTC
GTGTATTGACTCACCGAAATCCTCTCCCCCGCAACACTCGCAGGCGCGGG
CTTCCTCTCACCATTCCATATAGGAGTTGTGCAAGCTTTGCAAGAAAAAG
GCATCATCACTTCTCAGACCAAGGTATGAGAATCACACTCAGTAGTCTCC
ACTTCTATCCCCCCTTTCTAACCTACCCCATCATCCACCACACACACGCA
GCTGGCAGGCGCCTCGGGTGGTGCTCTCGTGGCAGGGTCCACAGTGTGTG
GCCTCACTCCAGCAGAGCAGATGGCGGCTTATAAAGAAATGGCTGGCGTG
TGTCGAGCCGCGGGTTTTTTGGGGAAGGTCCGACGAGTGCTGCGCAGGAG
TCTAGAGGCCCGCTTGCCTGAGGATGCGCACGAAGTGGCCAATCGACGGT
ATAAAGGGAGGATAAAGCGTGATGAAATGAATTGGTGACGCATCTTAGAT
TTTGCAGGCTACTAATCTCATTTCTCACACAAACCATCTATCTTATCCTT
CTATCTACGATCCAGGCTCACTATCGCCGTTATGCGCGTCTGGCCCGCAT
TCCAATTCCAACCGGAGCTCCTCGAACACTTTCACTCCCGCCAAGACTTG
CTCGACTCTCTTATGACCTCGTCACACGTCCCACTCTACCTCGACGCCGA
ACAGCCATTTTGGACTAAATTTCGCACGGGGTTGTATGTGGATGGAGGGC
TGATCAACCTCGTGCCGCCGGTGCCGGGTTCGATCAAGGTCCATTAGAGG
AGAGGGCAGGGAGGGAGGGAGGGAGAAAGGGAGGGAGGGAGAAGGGAGGT
GGAGAGACATTTTTCCTTTTACCAGTGTGCTACACGGCCACGTATCTTGC
AACACATTTGGTGCGGCCTTTTTTGGTATGGATGGAGGGTTGCTTGGGTT
GGTACCCTGCTGCCGGGGTCGTTCAGGCAGCTGGAGCAGATAAGATACTT
ATCTACTGCCGGCGATGACGGTGCATGAACACTGACCCTCCTTTTTCTTT
CTTAACATTTTCATACACAGGTGTGCGTCTTCCCCGGCCACTTTCTCCTC
CGGGATGACCTGCACGTCACCCCCCACCTCCTCGGCAAGAGCTACCCCTT
CTCATTTCAACAAATCATTAAATGGGCATTCGTGGCACCACCTGACGACG
TTGCAGACGAATTGCAGCGCATGGGGCACCAAGCAGCGGTAGAGTGGGCC
AAGACGGGCGGGATCGAGGAAGGGAGGGAGATAGATTTGGCCGAAGCGGT
GGAGCCGGATAAGTCGGTGGGTACGTCTTTCGTACGATCCGGGCATGTGG
TGGGTTTGAGTACCAGTAATGGTGGTAGCAACACGAATAACAACGATATG
TGTGAGGAGAAAGAACAGCACGCCCACGGGGACACGAAAAAGAAAGGAAA
CTGCGAAGCATTGAACAAAGTAACCGACAACAAGAACAACTGACTCTCAT
GCACAAATTAAATGCAGAGATGTATAGAAGAGGCCAATGATGCAAAAAGG
AAAAAAGACGCCAAACAATGTAAA back to topCoding sequence (CDS) from alignment at scaffold_26:150505..152378- >mRNA_8537 ID=mRNA_8537|Name=jgi.p|Nanoce1779_2|603015|organism=Nannochloropsis oceanica|type=CDS|length=5340bp|location=Sequence derived from alignment at scaffold_26:150505..152378- (Nannochloropsis oceanica)
GTGTGCGTCTTCCCCGGCCACTTTCTCCTCCGGGATGACCTGCACGTCAC
CCCCCACCTCCTCGGCAAGAGCTACCCCTTCTCATTTCAACAAATCATTA
AATGGGCATTCGTGGCACCACCTGACGACGTTGCAGACGAATTGCAGCGC
ATGGGGCACCAAGCAGCGGTAGAGTGGGCCAAGACGGGCGGGATCGAGGA
AGGGAGGGAGATAGATTTGGCCGAAGCGGTGGAGCCGGATAAGTCGGTGG
GTACGTCTTTCGTACGATCCGGGCATGTGGTGGGTTTGAGTACCAGTAAT
GGTGGTAGCAACACGAATAACAACGATATGTGTGAGGAGAAAGAACAGCA
CGCCCACGGGGACACGAAAAAGAAAGGAAACTGCGAAGCATTGAACAAAG
TAACCGACAACAAGAACAACTGAGCTCACTATCGCCGTTATGCGCGTCTG
GCCCGCATTCCAATTCCAACCGGAGCTCCTCGAACACTTTCACTCCCGCC
AAGACTTGCTCGACTCTCTTATGACCTCGTCACACGTCCCACTCTACCTC
GACGCCGAACAGCCATTTTGGACTAAATTTCGCACGGGGTTGTATGTGGA
TGGAGGGCTGATCAACCTCGTGCCGCCGGTGCCGGGTTCGATCAAGCTGG
CAGGCGCCTCGGGTGGTGCTCTCGTGGCAGGGTCCACAGTGTGTGGCCTC
ACTCCAGCAGAGCAGATGGCGGCTTATAAAGAAATGGCTGGCGTGTGTCG
AGCCGCGGGTTTTTTGGGGAAGGTCCGACGAGTGCTGCGCAGGAGTCTAG
AGGCCCGCTTGCCTGAGGATGCGCACGAAGTGGCCAATCGACGGCGCGGG
CTTCCTCTCACCATTCCATATAGGAGTTGTGCAAGCTTTGCAAGAAAAAG
GCATCATCACTTCTCAGACCAAGATGCTGCCACGCCTATTGGTCCGGGCG
AGGGGCACCCTCCACCTTTGCAGCCCACGGTCACGGTGGTTGTCTTCGGG
GCCGGTCAGGGGCGAAGCCAAGCAGGAAGGTCTGACGCGGACTAAACAAC
CCGCTTTCTCCTTTTCAGGTGTGCGTCTTCCCCGGCCACTTTCTCCTCCG
GGATGACCTGCACGTCACCCCCCACCTCCTCGGCAAGAGCTACCCCTTCT
CATTTCAACAAATCATTAAATGGGCATTCGTGGCACCACCTGACGACGTT
GCAGACGAATTGCAGCGCATGGGGCACCAAGCAGCGGTAGAGTGGGCCAA
GACGGGCGGGATCGAGGAAGGGAGGGAGATAGATTTGGCCGAAGCGGTGG
AGCCGGATAAGTCGGTGGGTACGTCTTTCGTACGATCCGGGCATGTGGTG
GGTTTGAGTACCAGTAATGGTGGTAGCAACACGAATAACAACGATATGTG
TGAGGAGAAAGAACAGCACGCCCACGGGGACACGAAAAAGAAAGGAAACT
GCGAAGCATTGAACAAAGTAACCGACAACAAGAACAACTGAGCTCACTAT
CGCCGTTATGCGCGTCTGGCCCGCATTCCAATTCCAACCGGAGCTCCTCG
AACACTTTCACTCCCGCCAAGACTTGCTCGACTCTCTTATGACCTCGTCA
CACGTCCCACTCTACCTCGACGCCGAACAGCCATTTTGGACTAAATTTCG
CACGGGGTTGTATGTGGATGGAGGGCTGATCAACCTCGTGCCGCCGGTGC
CGGGTTCGATCAAGCTGGCAGGCGCCTCGGGTGGTGCTCTCGTGGCAGGG
TCCACAGTGTGTGGCCTCACTCCAGCAGAGCAGATGGCGGCTTATAAAGA
AATGGCTGGCGTGTGTCGAGCCGCGGGTTTTTTGGGGAAGGTCCGACGAG
TGCTGCGCAGGAGTCTAGAGGCCCGCTTGCCTGAGGATGCGCACGAAGTG
GCCAATCGACGGCGCGGGCTTCCTCTCACCATTCCATATAGGAGTTGTGC
AAGCTTTGCAAGAAAAAGGCATCATCACTTCTCAGACCAAGATGCTGCCA
CGCCTATTGGTCCGGGCGAGGGGCACCCTCCACCTTTGCAGCCCACGGTC
ACGGTGGTTGTCTTCGGGGCCGGTCAGGGGCGAAGCCAAGCAGGAAGGTC
TGACGCGGACTAAACAACCCGCTTTCTCCTTTTCAGGTGTGCGTCTTCCC
CGGCCACTTTCTCCTCCGGGATGACCTGCACGTCACCCCCCACCTCCTCG
GCAAGAGCTACCCCTTCTCATTTCAACAAATCATTAAATGGGCATTCGTG
GCACCACCTGACGACGTTGCAGACGAATTGCAGCGCATGGGGCACCAAGC
AGCGGTAGAGTGGGCCAAGACGGGCGGGATCGAGGAAGGGAGGGAGATAG
ATTTGGCCGAAGCGGTGGAGCCGGATAAGTCGGTGGGTACGTCTTTCGTA
CGATCCGGGCATGTGGTGGGTTTGAGTACCAGTAATGGTGGTAGCAACAC
GAATAACAACGATATGTGTGAGGAGAAAGAACAGCACGCCCACGGGGACA
CGAAAAAGAAAGGAAACTGCGAAGCATTGAACAAAGTAACCGACAACAAG
AACAACTGAGCTCACTATCGCCGTTATGCGCGTCTGGCCCGCATTCCAAT
TCCAACCGGAGCTCCTCGAACACTTTCACTCCCGCCAAGACTTGCTCGAC
TCTCTTATGACCTCGTCACACGTCCCACTCTACCTCGACGCCGAACAGCC
ATTTTGGACTAAATTTCGCACGGGGTTGTATGTGGATGGAGGGCTGATCA
ACCTCGTGCCGCCGGTGCCGGGTTCGATCAAGCTGGCAGGCGCCTCGGGT
GGTGCTCTCGTGGCAGGGTCCACAGTGTGTGGCCTCACTCCAGCAGAGCA
GATGGCGGCTTATAAAGAAATGGCTGGCGTGTGTCGAGCCGCGGGTTTTT
TGGGGAAGGTCCGACGAGTGCTGCGCAGGAGTCTAGAGGCCCGCTTGCCT
GAGGATGCGCACGAAGTGGCCAATCGACGGCGCGGGCTTCCTCTCACCAT
TCCATATAGGAGTTGTGCAAGCTTTGCAAGAAAAAGGCATCATCACTTCT
CAGACCAAGATGCTGCCACGCCTATTGGTCCGGGCGAGGGGCACCCTCCA
CCTTTGCAGCCCACGGTCACGGTGGTTGTCTTCGGGGCCGGTCAGGGGCG
AAGCCAAGCAGGAAGGTCTGACGCGGACTAAACAACCCGCTTTCTCCTTT
TCAGGTGTGCGTCTTCCCCGGCCACTTTCTCCTCCGGGATGACCTGCACG
TCACCCCCCACCTCCTCGGCAAGAGCTACCCCTTCTCATTTCAACAAATC
ATTAAATGGGCATTCGTGGCACCACCTGACGACGTTGCAGACGAATTGCA
GCGCATGGGGCACCAAGCAGCGGTAGAGTGGGCCAAGACGGGCGGGATCG
AGGAAGGGAGGGAGATAGATTTGGCCGAAGCGGTGGAGCCGGATAAGTCG
GTGGGTACGTCTTTCGTACGATCCGGGCATGTGGTGGGTTTGAGTACCAG
TAATGGTGGTAGCAACACGAATAACAACGATATGTGTGAGGAGAAAGAAC
AGCACGCCCACGGGGACACGAAAAAGAAAGGAAACTGCGAAGCATTGAAC
AAAGTAACCGACAACAAGAACAACTGAGCTCACTATCGCCGTTATGCGCG
TCTGGCCCGCATTCCAATTCCAACCGGAGCTCCTCGAACACTTTCACTCC
CGCCAAGACTTGCTCGACTCTCTTATGACCTCGTCACACGTCCCACTCTA
CCTCGACGCCGAACAGCCATTTTGGACTAAATTTCGCACGGGGTTGTATG
TGGATGGAGGGCTGATCAACCTCGTGCCGCCGGTGCCGGGTTCGATCAAG
CTGGCAGGCGCCTCGGGTGGTGCTCTCGTGGCAGGGTCCACAGTGTGTGG
CCTCACTCCAGCAGAGCAGATGGCGGCTTATAAAGAAATGGCTGGCGTGT
GTCGAGCCGCGGGTTTTTTGGGGAAGGTCCGACGAGTGCTGCGCAGGAGT
CTAGAGGCCCGCTTGCCTGAGGATGCGCACGAAGTGGCCAATCGACGGCG
CGGGCTTCCTCTCACCATTCCATATAGGAGTTGTGCAAGCTTTGCAAGAA
AAAGGCATCATCACTTCTCAGACCAAGATGCTGCCACGCCTATTGGTCCG
GGCGAGGGGCACCCTCCACCTTTGCAGCCCACGGTCACGGTGGTTGTCTT
CGGGGCCGGTCAGGGGCGAAGCCAAGCAGGAAGGTCTGACGCGGACTAAA
CAACCCGCTTTCTCCTTTTCAGGTGTGCGTCTTCCCCGGCCACTTTCTCC
TCCGGGATGACCTGCACGTCACCCCCCACCTCCTCGGCAAGAGCTACCCC
TTCTCATTTCAACAAATCATTAAATGGGCATTCGTGGCACCACCTGACGA
CGTTGCAGACGAATTGCAGCGCATGGGGCACCAAGCAGCGGTAGAGTGGG
CCAAGACGGGCGGGATCGAGGAAGGGAGGGAGATAGATTTGGCCGAAGCG
GTGGAGCCGGATAAGTCGGTGGGTACGTCTTTCGTACGATCCGGGCATGT
GGTGGGTTTGAGTACCAGTAATGGTGGTAGCAACACGAATAACAACGATA
TGTGTGAGGAGAAAGAACAGCACGCCCACGGGGACACGAAAAAGAAAGGA
AACTGCGAAGCATTGAACAAAGTAACCGACAACAAGAACAACTGAGCTCA
CTATCGCCGTTATGCGCGTCTGGCCCGCATTCCAATTCCAACCGGAGCTC
CTCGAACACTTTCACTCCCGCCAAGACTTGCTCGACTCTCTTATGACCTC
GTCACACGTCCCACTCTACCTCGACGCCGAACAGCCATTTTGGACTAAAT
TTCGCACGGGGTTGTATGTGGATGGAGGGCTGATCAACCTCGTGCCGCCG
GTGCCGGGTTCGATCAAGCTGGCAGGCGCCTCGGGTGGTGCTCTCGTGGC
AGGGTCCACAGTGTGTGGCCTCACTCCAGCAGAGCAGATGGCGGCTTATA
AAGAAATGGCTGGCGTGTGTCGAGCCGCGGGTTTTTTGGGGAAGGTCCGA
CGAGTGCTGCGCAGGAGTCTAGAGGCCCGCTTGCCTGAGGATGCGCACGA
AGTGGCCAATCGACGGCGCGGGCTTCCTCTCACCATTCCATATAGGAGTT
GTGCAAGCTTTGCAAGAAAAAGGCATCATCACTTCTCAGACCAAGATGCT
GCCACGCCTATTGGTCCGGGCGAGGGGCACCCTCCACCTTTGCAGCCCAC
GGTCACGGTGGTTGTCTTCGGGGCCGGTCAGGGGCGAAGCCAAGCAGGAA
GGTCTGACGCGGACTAAACAACCCGCTTTCTCCTTTTCAG back to top
|