|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 568949 |
| Track | FilteredModels2 |
| ProteinId | 568863 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_29 | supercontig | scaffold_29:97516..100221 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8888 ID=mRNA_8888|Name=jgi.p|Nanoce1779_2|568863|organism=Nannochloropsis oceanica|type=mRNA|length=1131bp
ATGAAGAGGGAACTGGAGGCGATGGTACCGTTTGAGGGGGAGGGAGGGAG
GGAGGGAGAAGGAATCCTGGAGCAGAAAGACTCGATTTTGAGGGACGTGG
GAGCGGAGTATGAAGAGGTATTGTTGGCAGTGCTGGGGAGGGAGGATAGA
TGGGAGAGGGGGAAGGAGGATGGAGGGGAGGAGCAGAACGTAGAGCTGAT
GGCATTGAAGAGATCTGCAAAAAGGGATAGGTGGGGGGGGAAGAGGACAG
ACAAAAACAAAGAGAGAGAGAAGGAAAAGGAGAATGAAAACCGCGATATC
GAAGTTGAGGATGAAGAAAAAAGAGAGGAAGCGAAGGAGGGCGTGTGCAG
TTTTTTGACGGAGAGCGAGAGGGAGGGGTTGGAATGGGCTGAAAGCGGCA
AGCTCGACGATTGCCTCAGCGAGGAGCTCGAATCAATAGGCATGTGGGAC
CGATCGGATAAAGAGCGTGCCCTTCGGCATTTTCTCCGTACACTTGCCAT
GCAACAGCAGGGAGGGAGGGAGGGAGGGGAGGCAGCGGTGTTGGAGGCAG
AGATTGGTTTAGGATTGAGGCAGGACGAGAGGCGGGTGAAGAGGATGGAA
GAGGAAAATAATAAAAGAATCGCGAAATTGAGAGAGAAGATTCTGGTAGC
TGTTGGGGAGGAGTTGAAGTACAAAGCGCTCCATCCCTACCCTGAGAACG
AGGAAGGAAGTGATGAAAGGGAGGTTGAGGGGGACAGGGTGGGCGTGGTG
AGACTGACGGAGGGGAACCATGGAAAGGTGGAGAAACATACGAAGGAAAA
GAAGGAGAGAAAGAAGGTGGGGACAACTTCAGCTGCGGCAGCGCCCGCTG
CTGGTGGTGGTAATCGGAGTGGTGTTGGTGGGATGGTTGTGAAGGAGGAG
AAGGAGAAGGGTAGTAAGAAGGGGTCAGGGAGCAAGGCGGCGTCCACAGA
TTCCTCATCCACGGTGAAGATCGAAGAAACAGCAGCAGCAGCTGCAGCAG
CTGCAGCAGCACCGCCAGTGCCAGGGAAGGGTCGGGCAAGTAGTGGGAAG
CAAGGGAAGCAGGCACTAGCGGCAGCCGCAGCAGCTACAGGAGATCTGAT
CTCGGCGTTGGGGATGGATGATTTATGGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|568863 >mRNA_8888-protein ID=mRNA_8888-protein|Name=jgi.p|Nanoce1779_2|568863|organism=Nannochloropsis oceanica|type=polypeptide|length=377bp
MKRELEAMVPFEGEGGREGEGILEQKDSILRDVGAEYEEVLLAVLGREDR
WERGKEDGGEEQNVELMALKRSAKRDRWGGKRTDKNKEREKEKENENRDI
EVEDEEKREEAKEGVCSFLTESEREGLEWAESGKLDDCLSEELESIGMWD
RSDKERALRHFLRTLAMQQQGGREGGEAAVLEAEIGLGLRQDERRVKRME
EENNKRIAKLREKILVAVGEELKYKALHPYPENEEGSDEREVEGDRVGVV
RLTEGNHGKVEKHTKEKKERKKVGTTSAAAAPAAGGGNRSGVGGMVVKEE
KEKGSKKGSGSKAASTDSSSTVKIEETAAAAAAAAAAPPVPGKGRASSGK
QGKQALAAAAAATGDLISALGMDDLW* back to topmRNA from alignment at scaffold_29:97516..100221- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8888 ID=mRNA_8888|Name=jgi.p|Nanoce1779_2|568863|organism=Nannochloropsis oceanica|type=mRNA|length=2706bp|location=Sequence derived from alignment at scaffold_29:97516..100221- (Nannochloropsis oceanica)
ATGAAGAGGGAACTGGAGGCGATGGTACCGTTTGAGGGGGAGGGAGGGAG
GGAGGGAGAAGGAATCCTGGAGCAGAAAGACTCGATTTTGAGGGACGTGG
GAGCGGAGTATGAAGAGGTATTGTTGGCAGTGCTGGGGAGGGAGGATAGA
TGGGAGAGGGGGAAGGAGGATGGAGGGGAGGAGCAGAACGTAGAGCTGAT
GGCATTGAAGAGATCTGCAAAAAGGGATAGGTGGGGGGGGAAGAGGACAG
ACAAAAACAAAGAGAGAGAGAAGGAAAAGGAGAATGAAAACCGCGATATC
GAAGTTGAGGATGAAGAAAAAAGAGAGGAAGCGAAGGAGGGCGTGTGCAG
TTTTTTGACGGAGAGCGAGAGGGAGGGGTTGGAATGGGCTGAAAGCGGGT
ACAAAACGGACCTTGGACCACACCCCCTCCTTCGCCGTCTTCTTTCGGCC
TTCGTCCACCCTCTAAAACTGCACCCTCTGCCCTCTTCACCAGCAGAAGA
AGGAGCAGCAGTAGCGGCAGCGGTTGTGGAAGAAGAGGAGGAAGAAATGG
CAGGAGAGGAGGAGGAGGCGGAGGAAGACAAAGGGAGGGGGATAAAGAAG
CGGAAGAGTTCTAACAGTGATATGGAGGAAAGTCCGGTAGAAGAAAAGGA
AGGGAGCGCCTTGCCTCCTTCTCCTTCGCCCCGGAAAAAGCGAGCTGTAG
CTCAAGAGGAGAAGGAGAAGGAGAGGGAGGAGGAAGGGAAGAAGGAGAAG
GAGAAGGGGGAGGAAGGGCAGGTGGAGAAAGATGAGGATGAGGAGGAAGA
GAAAGAGGTTGAAGACGAGGAAAAGGATGAGGTGAAAGAAATGAAGGAGG
GGTTTCCCGGCACAAAGCTGTCTTCCATTCCTATTTCTCCTTCTCGACCC
ACCAGTGCTGGTGCTGGTGGTGCTGCTGGTGCTGGTGGTGTTGCCGGTAC
TGGTGCCGGAACTTCTCTTACCGCACCTAGTGCTGGCGAAGAAAAAGAAG
GAGGAGAGGCTCAGAAGGAGAAGGAAGGAAAGGCAGCCCCGCACCGCTCG
AGCTTCACCTTCCCGCCCCCCAGCACCACCAACAGCAACAATAGCATTAC
GAAATCTCGAGCACCAGCGCCATCACAACAACAACAACAACAACAAGAAC
AAGAATCACCACCACCACCACTACTGCCACCCTATTCTCCCTCCTGCCTT
CTCCAAAAACGCCTCCCTTACTCCTCCCCCCGCACCCCTCGAGGCCGCAA
CACCCTTTTCTTTGACCATCATCTTGTCCGCAGCAAGCTCGACGATTGCC
TCAGCGAGGAGCTCGAATCAATAGGCATGTGGGACCGATCGGATAAAGAG
CGTGCCCTTCGGCATTTTCTCCGTACACTTGCCATGCAACAGCAGGGAGG
GAGGGAGGGAGGGGAGGCAGCGGTGTTGGAGGCAGAGATTGGTTTAGGAT
TGAGGCAGGACGAGAGGCGGGTGAAGAGGATGGAAGAGGAAAATAATAAA
AGAATCGCGAAATTGAGAGAGAAGATTCTGGTAGCTGTTGGGGAGGAGTT
GAAGTACAAAGCGCTCCATCCCTACCCTGAGAACGAGGTCTTAGAAAGGT
ACAAAAAGTACTTGAAACGAAAAGATAAATCAGCGGCAGCAACGACAACA
GTTGTAGGAGTAGCAGCAGTACCGGGAGCGGCAGCAGCGGGGGTGGTTAG
GAAAGAGGAAGGAAGTGATGAAAGGGAGGTTGAGGGGGACAGGGTGGGCG
TGGTGAGACTGACGGAGGGGAACCATGGAAAGGTGGAGAAACATACGAAG
GAAAAGAAGGAGAGAAAGAAGGTGGGGACAACTTCAGCTGCGGCAGCGCC
CGCTGCTGGTGGTGGTAATCGGAGTGGTGTTGGTGGGATGGTTGTGAAGG
AGGAGAAGGAGAAGGGTAGTAAGAAGGGGTCAGGGAGCAAGGCGGCGTCC
ACAGATTCCTCATCCACGGTGAAGATCGAAGAAACAGCAGCAGCAGCTGC
AGCAGCTGCAGCAGCACCGCCAGTGCCAGGGAAGGGTCGGGCAAGTAGTG
GGAAGCAAGGGAAGCAGGCACTAGCGGCAGCCGCAGCAGCTACAGGTAAA
AGCGACAAGCCGACTGCGGCCCGTAGCCATAAGAAGGGTGCAGCAAAGGC
AGCAGTAGGTGCTGCTGCCGCGGCGTCTGGTGGGAGGGAGGGTGGGAACG
GTGCGGGTGGGGAAGGCTATGGGTTGCATCTGCCGTCCACGTCGTCGAGC
GGGAGCAGCACTAGCAGCAGCAGCGGAGCGACTATGATGATGATTGGCAA
CAGCATCAGCAGCAACAGTAGCGGCAGCAATGGAGGGGAGGTGTCAAAGG
ATGGACAAATACAACAGCAGCAGCAGCAGCTTTTACCGTCGTTGCACATC
CCTTATCCTTTTCCCTCATCACTTGACGGGCTCGGAGAAGGGATAGGTGG
AGTAAAAAAGACGAGAGGACAAATTGGGCGAGGGATGGGGGAAGCTATGA
GTGGATGGATGGGAGGAGATTGCAGAACGGGAGAAGGGAGGAATGGAGGA
GAAATGGGAGGAGGGGGAGGAATTGTGGGAGAAATGGAGAGGGGGATGAC
GGATGACTTGATGGGAGGAGAGCATTTAATTGACCCCGATTCTTTTTTTT
CTCCAACGTCTCAAGGAGATCTGATCTCGGCGTTGGGGATGGATGATTTA
TGGTAG back to topCoding sequence (CDS) from alignment at scaffold_29:97516..100221- >mRNA_8888 ID=mRNA_8888|Name=jgi.p|Nanoce1779_2|568863|organism=Nannochloropsis oceanica|type=CDS|length=4524bp|location=Sequence derived from alignment at scaffold_29:97516..100221- (Nannochloropsis oceanica)
GAGATCTGATCTCGGCGTTGGGGATGGATGATTTATGGTAGGAAGGAAGT
GATGAAAGGGAGGTTGAGGGGGACAGGGTGGGCGTGGTGAGACTGACGGA
GGGGAACCATGGAAAGGTGGAGAAACATACGAAGGAAAAGAAGGAGAGAA
AGAAGGTGGGGACAACTTCAGCTGCGGCAGCGCCCGCTGCTGGTGGTGGT
AATCGGAGTGGTGTTGGTGGGATGGTTGTGAAGGAGGAGAAGGAGAAGGG
TAGTAAGAAGGGGTCAGGGAGCAAGGCGGCGTCCACAGATTCCTCATCCA
CGGTGAAGATCGAAGAAACAGCAGCAGCAGCTGCAGCAGCTGCAGCAGCA
CCGCCAGTGCCAGGGAAGGGTCGGGCAAGTAGTGGGAAGCAAGGGAAGCA
GGCACTAGCGGCAGCCGCAGCAGCTACAGCAAGCTCGACGATTGCCTCAG
CGAGGAGCTCGAATCAATAGGCATGTGGGACCGATCGGATAAAGAGCGTG
CCCTTCGGCATTTTCTCCGTACACTTGCCATGCAACAGCAGGGAGGGAGG
GAGGGAGGGGAGGCAGCGGTGTTGGAGGCAGAGATTGGTTTAGGATTGAG
GCAGGACGAGAGGCGGGTGAAGAGGATGGAAGAGGAAAATAATAAAAGAA
TCGCGAAATTGAGAGAGAAGATTCTGGTAGCTGTTGGGGAGGAGTTGAAG
TACAAAGCGCTCCATCCCTACCCTGAGAACGAGATGAAGAGGGAACTGGA
GGCGATGGTACCGTTTGAGGGGGAGGGAGGGAGGGAGGGAGAAGGAATCC
TGGAGCAGAAAGACTCGATTTTGAGGGACGTGGGAGCGGAGTATGAAGAG
GTATTGTTGGCAGTGCTGGGGAGGGAGGATAGATGGGAGAGGGGGAAGGA
GGATGGAGGGGAGGAGCAGAACGTAGAGCTGATGGCATTGAAGAGATCTG
CAAAAAGGGATAGGTGGGGGGGGAAGAGGACAGACAAAAACAAAGAGAGA
GAGAAGGAAAAGGAGAATGAAAACCGCGATATCGAAGTTGAGGATGAAGA
AAAAAGAGAGGAAGCGAAGGAGGGCGTGTGCAGTTTTTTGACGGAGAGCG
AGAGGGAGGGGTTGGAATGGGCTGAAAGCGGGAGATCTGATCTCGGCGTT
GGGGATGGATGATTTATGGTAGGAAGGAAGTGATGAAAGGGAGGTTGAGG
GGGACAGGGTGGGCGTGGTGAGACTGACGGAGGGGAACCATGGAAAGGTG
GAGAAACATACGAAGGAAAAGAAGGAGAGAAAGAAGGTGGGGACAACTTC
AGCTGCGGCAGCGCCCGCTGCTGGTGGTGGTAATCGGAGTGGTGTTGGTG
GGATGGTTGTGAAGGAGGAGAAGGAGAAGGGTAGTAAGAAGGGGTCAGGG
AGCAAGGCGGCGTCCACAGATTCCTCATCCACGGTGAAGATCGAAGAAAC
AGCAGCAGCAGCTGCAGCAGCTGCAGCAGCACCGCCAGTGCCAGGGAAGG
GTCGGGCAAGTAGTGGGAAGCAAGGGAAGCAGGCACTAGCGGCAGCCGCA
GCAGCTACAGCAAGCTCGACGATTGCCTCAGCGAGGAGCTCGAATCAATA
GGCATGTGGGACCGATCGGATAAAGAGCGTGCCCTTCGGCATTTTCTCCG
TACACTTGCCATGCAACAGCAGGGAGGGAGGGAGGGAGGGGAGGCAGCGG
TGTTGGAGGCAGAGATTGGTTTAGGATTGAGGCAGGACGAGAGGCGGGTG
AAGAGGATGGAAGAGGAAAATAATAAAAGAATCGCGAAATTGAGAGAGAA
GATTCTGGTAGCTGTTGGGGAGGAGTTGAAGTACAAAGCGCTCCATCCCT
ACCCTGAGAACGAGATGAAGAGGGAACTGGAGGCGATGGTACCGTTTGAG
GGGGAGGGAGGGAGGGAGGGAGAAGGAATCCTGGAGCAGAAAGACTCGAT
TTTGAGGGACGTGGGAGCGGAGTATGAAGAGGTATTGTTGGCAGTGCTGG
GGAGGGAGGATAGATGGGAGAGGGGGAAGGAGGATGGAGGGGAGGAGCAG
AACGTAGAGCTGATGGCATTGAAGAGATCTGCAAAAAGGGATAGGTGGGG
GGGGAAGAGGACAGACAAAAACAAAGAGAGAGAGAAGGAAAAGGAGAATG
AAAACCGCGATATCGAAGTTGAGGATGAAGAAAAAAGAGAGGAAGCGAAG
GAGGGCGTGTGCAGTTTTTTGACGGAGAGCGAGAGGGAGGGGTTGGAATG
GGCTGAAAGCGGGAGATCTGATCTCGGCGTTGGGGATGGATGATTTATGG
TAGGAAGGAAGTGATGAAAGGGAGGTTGAGGGGGACAGGGTGGGCGTGGT
GAGACTGACGGAGGGGAACCATGGAAAGGTGGAGAAACATACGAAGGAAA
AGAAGGAGAGAAAGAAGGTGGGGACAACTTCAGCTGCGGCAGCGCCCGCT
GCTGGTGGTGGTAATCGGAGTGGTGTTGGTGGGATGGTTGTGAAGGAGGA
GAAGGAGAAGGGTAGTAAGAAGGGGTCAGGGAGCAAGGCGGCGTCCACAG
ATTCCTCATCCACGGTGAAGATCGAAGAAACAGCAGCAGCAGCTGCAGCA
GCTGCAGCAGCACCGCCAGTGCCAGGGAAGGGTCGGGCAAGTAGTGGGAA
GCAAGGGAAGCAGGCACTAGCGGCAGCCGCAGCAGCTACAGCAAGCTCGA
CGATTGCCTCAGCGAGGAGCTCGAATCAATAGGCATGTGGGACCGATCGG
ATAAAGAGCGTGCCCTTCGGCATTTTCTCCGTACACTTGCCATGCAACAG
CAGGGAGGGAGGGAGGGAGGGGAGGCAGCGGTGTTGGAGGCAGAGATTGG
TTTAGGATTGAGGCAGGACGAGAGGCGGGTGAAGAGGATGGAAGAGGAAA
ATAATAAAAGAATCGCGAAATTGAGAGAGAAGATTCTGGTAGCTGTTGGG
GAGGAGTTGAAGTACAAAGCGCTCCATCCCTACCCTGAGAACGAGATGAA
GAGGGAACTGGAGGCGATGGTACCGTTTGAGGGGGAGGGAGGGAGGGAGG
GAGAAGGAATCCTGGAGCAGAAAGACTCGATTTTGAGGGACGTGGGAGCG
GAGTATGAAGAGGTATTGTTGGCAGTGCTGGGGAGGGAGGATAGATGGGA
GAGGGGGAAGGAGGATGGAGGGGAGGAGCAGAACGTAGAGCTGATGGCAT
TGAAGAGATCTGCAAAAAGGGATAGGTGGGGGGGGAAGAGGACAGACAAA
AACAAAGAGAGAGAGAAGGAAAAGGAGAATGAAAACCGCGATATCGAAGT
TGAGGATGAAGAAAAAAGAGAGGAAGCGAAGGAGGGCGTGTGCAGTTTTT
TGACGGAGAGCGAGAGGGAGGGGTTGGAATGGGCTGAAAGCGGGAGATCT
GATCTCGGCGTTGGGGATGGATGATTTATGGTAGGAAGGAAGTGATGAAA
GGGAGGTTGAGGGGGACAGGGTGGGCGTGGTGAGACTGACGGAGGGGAAC
CATGGAAAGGTGGAGAAACATACGAAGGAAAAGAAGGAGAGAAAGAAGGT
GGGGACAACTTCAGCTGCGGCAGCGCCCGCTGCTGGTGGTGGTAATCGGA
GTGGTGTTGGTGGGATGGTTGTGAAGGAGGAGAAGGAGAAGGGTAGTAAG
AAGGGGTCAGGGAGCAAGGCGGCGTCCACAGATTCCTCATCCACGGTGAA
GATCGAAGAAACAGCAGCAGCAGCTGCAGCAGCTGCAGCAGCACCGCCAG
TGCCAGGGAAGGGTCGGGCAAGTAGTGGGAAGCAAGGGAAGCAGGCACTA
GCGGCAGCCGCAGCAGCTACAGCAAGCTCGACGATTGCCTCAGCGAGGAG
CTCGAATCAATAGGCATGTGGGACCGATCGGATAAAGAGCGTGCCCTTCG
GCATTTTCTCCGTACACTTGCCATGCAACAGCAGGGAGGGAGGGAGGGAG
GGGAGGCAGCGGTGTTGGAGGCAGAGATTGGTTTAGGATTGAGGCAGGAC
GAGAGGCGGGTGAAGAGGATGGAAGAGGAAAATAATAAAAGAATCGCGAA
ATTGAGAGAGAAGATTCTGGTAGCTGTTGGGGAGGAGTTGAAGTACAAAG
CGCTCCATCCCTACCCTGAGAACGAGATGAAGAGGGAACTGGAGGCGATG
GTACCGTTTGAGGGGGAGGGAGGGAGGGAGGGAGAAGGAATCCTGGAGCA
GAAAGACTCGATTTTGAGGGACGTGGGAGCGGAGTATGAAGAGGTATTGT
TGGCAGTGCTGGGGAGGGAGGATAGATGGGAGAGGGGGAAGGAGGATGGA
GGGGAGGAGCAGAACGTAGAGCTGATGGCATTGAAGAGATCTGCAAAAAG
GGATAGGTGGGGGGGGAAGAGGACAGACAAAAACAAAGAGAGAGAGAAGG
AAAAGGAGAATGAAAACCGCGATATCGAAGTTGAGGATGAAGAAAAAAGA
GAGGAAGCGAAGGAGGGCGTGTGCAGTTTTTTGACGGAGAGCGAGAGGGA
GGGGTTGGAATGGGCTGAAAGCGG back to top
|