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Properties
Property Name | Value |
TranscriptId | 248725 |
Track | FilteredModels2 |
ProteinId | 248639 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_30 | supercontig | scaffold_30:93312..94097 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8981 ID=mRNA_8981|Name=jgi.p|Nanoce1779_2|248639|organism=Nannochloropsis oceanica|type=mRNA|length=571bp GACAGAGACTTTCTACCATGGCCTAGCGCTGTAAAAAAGAGACCGCGGGG CTCCTGCGAGGTATGCTATCAGCTCAAGACACAGTGCGACAAGACGTTCC CTTGTGGAAGGTGCTATCGCCTAAACAAGCCCTGCCGTCCCCCCACAGAA TCACTCGAGCTCCTCCACCACCCTGCCTCCTCCTCCTCCTCCTCCTCCTC CTTCTCCTCCCCCTCCTCCCCCTCCTCCTCTCCTTCCTCATCCTCCCCCC TCCTGGACCTGGTCATCGAACGCATCGACTTCAAACCCATGGTACATCTG TATATGCAGGCCTTCCACGAGCTGAGGGAGGAGGGACTCGTGGATAGAAG ACGGGCGATTGGCTTGTTAAGGATGTGGATGAACCTGGGCTTGCTCTTTG GAGGCAACTCGGATCCGACGTTGGGCATGTTCTCACAGGTGAGTGAGTTA TTTCTATATATATACATGCCTGCCTTCCTATTCCCTCCTTCTTCCCCTCC TTCCGCAGGTCTGACACATAGACTCTCACTCTGTCCTTCCCTCTCTACCT CCCTCCTTAGGTCCAGGACTC back to topprotein sequence of jgi.p|Nanoce1779_2|248639 >mRNA_8981-protein ID=mRNA_8981-protein|Name=jgi.p|Nanoce1779_2|248639|organism=Nannochloropsis oceanica|type=polypeptide|length=190bp DRDFLPWPSAVKKRPRGSCEVCYQLKTQCDKTFPCGRCYRLNKPCRPPTE SLELLHHPASSSSSSSSFSSPSSPSSSPSSSSPLLDLVIERIDFKPMVHL YMQAFHELREEGLVDRRRAIGLLRMWMNLGLLFGGNSDPTLGMFSQVSEL FLYIYMPAFLFPPSSPPSAGLTHRLSLCPSLSTSLLRSRT back to topmRNA from alignment at scaffold_30:93312..94097- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8981 ID=mRNA_8981|Name=jgi.p|Nanoce1779_2|248639|organism=Nannochloropsis oceanica|type=mRNA|length=786bp|location=Sequence derived from alignment at scaffold_30:93312..94097- (Nannochloropsis oceanica) GACAGAGACTTTCTACCATGGCCTAGCGCTGTAAAAAAGAGACCGCGGGG
CTCCTGCGAGGTATGCTATCAGCTCAAGACACAGTGCGACAAGACGTTCC
CTTGTGGAAGGTGCGTGCTTCACTAGGAGAGGGAAGGGGAAGAGGGCTGA
TATTTTCGTATCCAGCCGATTCAGCGATCCATAGGACCGTTCGAGGTCAC
CATCAACCATCGTACCCGTTCAAATAATAGTATAATAGTAATTATATCAA
TGCATGCATACGTACACACTTATATTCATACATCGTTAAATCTCAACATC
TTCTTCTCTTTATCCTCATCCCCAGGTGCTATCGCCTAAACAAGCCCTGC
CGTCCCCCCACAGAATCACTCGAGCTCCTCCACCACCCTGCCTCCTCCTC
CTCCTCCTCCTCCTCCTTCTCCTCCCCCTCCTCCCCCTCCTCCTCTCCTT
CCTCATCCTCCCCCCTCCTGGACCTGGTCATCGAACGCATCGACTTCAAA
CCCATGGTACATCTGTATATGCAGGCCTTCCACGAGCTGAGGGAGGAGGG
ACTCGTGGATAGAAGACGGGCGATTGGCTTGTTAAGGATGTGGATGAACC
TGGGCTTGCTCTTTGGAGGCAACTCGGATCCGACGTTGGGCATGTTCTCA
CAGGTGAGTGAGTTATTTCTATATATATACATGCCTGCCTTCCTATTCCC
TCCTTCTTCCCCTCCTTCCGCAGGTCTGACACATAGACTCTCACTCTGTC
CTTCCCTCTCTACCTCCCTCCTTAGGTCCAGGACTC back to topCoding sequence (CDS) from alignment at scaffold_30:93312..94097- >mRNA_8981 ID=mRNA_8981|Name=jgi.p|Nanoce1779_2|248639|organism=Nannochloropsis oceanica|type=CDS|length=1142bp|location=Sequence derived from alignment at scaffold_30:93312..94097- (Nannochloropsis oceanica) GTGCTATCGCCTAAACAAGCCCTGCCGTCCCCCCACAGAATCACTCGAGC TCCTCCACCACCCTGCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCC CCCTCCTCCCCCTCCTCCTCTCCTTCCTCATCCTCCCCCCTCCTGGACCT GGTCATCGAACGCATCGACTTCAAACCCATGGTACATCTGTATATGCAGG CCTTCCACGAGCTGAGGGAGGAGGGACTCGTGGATAGAAGACGGGCGATT GGCTTGTTAAGGATGTGGATGAACCTGGGCTTGCTCTTTGGAGGCAACTC GGATCCGACGTTGGGCATGTTCTCACAGGTGAGTGAGTTATTTCTATATA TATACATGCCTGCCTTCCTATTCCCTCCTTCTTCCCCTCCTTCCGCAGGT CTGACACATAGACTCTCACTCTGTCCTTCCCTCTCTACCTCCCTCCTTAG GTCCAGGACTCGACAGAGACTTTCTACCATGGCCTAGCGCTGTAAAAAAG AGACCGCGGGGCTCCTGCGAGGTATGCTATCAGCTCAAGACACAGTGCGA CAAGACGTTCCCTTGTGGAAGGTGCTATCGCCTAAACAAGCCCTGCCGTC CCCCCACAGAATCACTCGAGCTCCTCCACCACCCTGCCTCCTCCTCCTCC TCCTCCTCCTCCTTCTCCTCCCCCTCCTCCCCCTCCTCCTCTCCTTCCTC ATCCTCCCCCCTCCTGGACCTGGTCATCGAACGCATCGACTTCAAACCCA TGGTACATCTGTATATGCAGGCCTTCCACGAGCTGAGGGAGGAGGGACTC GTGGATAGAAGACGGGCGATTGGCTTGTTAAGGATGTGGATGAACCTGGG CTTGCTCTTTGGAGGCAACTCGGATCCGACGTTGGGCATGTTCTCACAGG TGAGTGAGTTATTTCTATATATATACATGCCTGCCTTCCTATTCCCTCCT TCTTCCCCTCCTTCCGCAGGTCTGACACATAGACTCTCACTCTGTCCTTC CCTCTCTACCTCCCTCCTTAGGTCCAGGACTCGACAGAGACTTTCTACCA TGGCCTAGCGCTGTAAAAAAGAGACCGCGGGGCTCCTGCGAGGTATGCTA TCAGCTCAAGACACAGTGCGACAAGACGTTCCCTTGTGGAAG back to top
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