|
Properties
Property Name | Value |
TranscriptId | 605500 |
Track | FilteredModels2 |
ProteinId | 605414 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_32 | supercontig | scaffold_32:32020..33006 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9779 ID=mRNA_9779|Name=jgi.p|Nanoce1779_2|605414|organism=Nannochloropsis oceanica|type=mRNA|length=909bp GTCGCTATTCATGTAAGTCTTAACGCAATGTCTTTCGAAGGCCAGTCCTC CCCCCCCCAATTTCCCACCAAATTAAAATCATGACCTATCAATTTATCTT CCAGCTACGCGTTGGTGACGTGGTGTTGCTTGATGGTGACCAAGGCAAAG GATTTTTTTCGAGGCTCAAAAGCCAGCTCGACACCGTGCTTACCTTTTCT CCTGTCCATTACTTTTTCTTTGCGGAAGCGCCTAATGACGAATCGGTAAA TGAGCTTCTAGTTCCCCCTGCTGGATTCGACTTTTTAGCTGACATATTTG GGAACAGAAGTCATCAGAAAGAGGGTGTTTCCTCACATCGTATGTCCTAT ATTAAGCATATGGGTGTCAAAGAGACACTTTACCACCACATGAATGCGGA CATGGTTATTGCCACTGGCTCCTCGTTCCCATTGGTTGCAGTTACGGTGT CGTCTAAGCCCGTAGTGCTATTCACCAAATCAAAAGAAGGAGGCTTTTAT CCCTCCCAGATGCGAGCGGATTATGCAATGATTGGGGATGACGGGACAAT CTTATCACCCACGATTGCAGAATTGTCGGCACAAACACTCATGCGATTCC TAGAAGTACACGATAAAGAAGTGCCCTATGGGTGAAACTTTCAATTTACG CGAGGTAGGTGATGAGGTGAACGCCACAACGAGATTAACTCTTTCTATAT TACCTAGATAGAATGCAATCGTCAGTCAGTCAAAGTCTAGGTATACGGAG TGAAATGGAGGATGACAACCGTTATGTGCGCGTCCCCCAGCGCCTCCCGG CGGCCCGCTCAAGTACAGCTGAGACTCTCTGCACCTGTGAGAGCGGGAGG GAGTGACCACTCCGTGGCACCTAGACCGCAAACCTTTGTGACTAGATGGG ACATCGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|605414 >mRNA_9779-protein ID=mRNA_9779-protein|Name=jgi.p|Nanoce1779_2|605414|organism=Nannochloropsis oceanica|type=polypeptide|length=185bp MTYQFIFQLRVGDVVLLDGDQGKGFFSRLKSQLDTVLTFSPVHYFFFAEA PNDESVNELLVPPAGFDFLADIFGNRSHQKEGVSSHRMSYIKHMGVKETL YHHMNADMVIATGSSFPLVAVTVSSKPVVLFTKSKEGGFYPSQMRADYAM IGDDGTILSPTIAELSAQTLMRFLEVHDKEVPYG* back to topmRNA from alignment at scaffold_32:32020..33006- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9779 ID=mRNA_9779|Name=jgi.p|Nanoce1779_2|605414|organism=Nannochloropsis oceanica|type=mRNA|length=987bp|location=Sequence derived from alignment at scaffold_32:32020..33006- (Nannochloropsis oceanica) GTCGCTATTCATGTAAGTCTTAACGCAATGTCTTTCGAAGGCCAGTCCTC
CCCCCCCCAATTTCCCACCAAATTAAAATCATGACCTATCAATTTATCTT
CCAGCTACGCGTTGGTGACGTGGTGTTGCTTGATGGTGACCAAGGCAAAG
GATTTTTTTCGAGGCTCAAAAGCCAGCTCGACACCGTGCTTACCTTTTCT
CCTGTCCATTACTTTTTCTTTGCGGAAGCGCCTAATGACGAATCGGTAAA
TGAGCTTCTAGTTCCCCCTGCTGGATTCGACTTTTTAGCTGACATATTTG
GGAACAGAAGTCATCAGAAAGAGGGTGTTTCCTCACATCGTATGTCCTAT
ATTAAGCATATGGGTGTCAAAGAGACACTTTACCACCACATGAATGCGGA
CATGGTTATTGCCACTGGCTCCTCGTTCCCATTGGTTGCAGTTACGGTGT
CGTCTAAGGTATGTGGGCACTTAGATGACGCTAATTTTGGTTCTTCCACC
ATTTTCCCACCTTATACACGCTCCTGCTTTTTCCAGCCCGTAGTGCTATT
CACCAAATCAAAAGAAGGAGGCTTTTATCCCTCCCAGATGCGAGCGGATT
ATGCAATGATTGGGGATGACGGGACAATCTTATCACCCACGATTGCAGAA
TTGTCGGCACAAACACTCATGCGATTCCTAGAAGTACACGATAAAGAAGT
GCCCTATGGGTGAAACTTTCAATTTACGCGAGGTAGGTGATGAGGTGAAC
GCCACAACGAGATTAACTCTTTCTATATTACCTAGATAGAATGCAATCGT
CAGTCAGTCAAAGTCTAGGTATACGGAGTGAAATGGAGGATGACAACCGT
TATGTGCGCGTCCCCCAGCGCCTCCCGGCGGCCCGCTCAAGTACAGCTGA
GACTCTCTGCACCTGTGAGAGCGGGAGGGAGTGACCACTCCGTGGCACCT
AGACCGCAAACCTTTGTGACTAGATGGGACATCGGGG back to topCoding sequence (CDS) from alignment at scaffold_32:32020..33006- >mRNA_9779 ID=mRNA_9779|Name=jgi.p|Nanoce1779_2|605414|organism=Nannochloropsis oceanica|type=CDS|length=1110bp|location=Sequence derived from alignment at scaffold_32:32020..33006- (Nannochloropsis oceanica) CCCGTAGTGCTATTCACCAAATCAAAAGAAGGAGGCTTTTATCCCTCCCA GATGCGAGCGGATTATGCAATGATTGGGGATGACGGGACAATCTTATCAC CCACGATTGCAGAATTGTCGGCACAAACACTCATGCGATTCCTAGAAGTA CACGATAAAGAAGTGCCCTATGGGTGAATGACCTATCAATTTATCTTCCA GCTACGCGTTGGTGACGTGGTGTTGCTTGATGGTGACCAAGGCAAAGGAT TTTTTTCGAGGCTCAAAAGCCAGCTCGACACCGTGCTTACCTTTTCTCCT GTCCATTACTTTTTCTTTGCGGAAGCGCCTAATGACGAATCGGTAAATGA GCTTCTAGTTCCCCCTGCTGGATTCGACTTTTTAGCTGACATATTTGGGA ACAGAAGTCATCAGAAAGAGGGTGTTTCCTCACATCGTATGTCCTATATT AAGCATATGGGTGTCAAAGAGACACTTTACCACCACATGAATGCGGACAT GGTTATTGCCACTGGCTCCTCGTTCCCATTGGTTGCAGTTACGGTGTCGT CTAAGCCCGTAGTGCTATTCACCAAATCAAAAGAAGGAGGCTTTTATCCC TCCCAGATGCGAGCGGATTATGCAATGATTGGGGATGACGGGACAATCTT ATCACCCACGATTGCAGAATTGTCGGCACAAACACTCATGCGATTCCTAG AAGTACACGATAAAGAAGTGCCCTATGGGTGAATGACCTATCAATTTATC TTCCAGCTACGCGTTGGTGACGTGGTGTTGCTTGATGGTGACCAAGGCAA AGGATTTTTTTCGAGGCTCAAAAGCCAGCTCGACACCGTGCTTACCTTTT CTCCTGTCCATTACTTTTTCTTTGCGGAAGCGCCTAATGACGAATCGGTA AATGAGCTTCTAGTTCCCCCTGCTGGATTCGACTTTTTAGCTGACATATT TGGGAACAGAAGTCATCAGAAAGAGGGTGTTTCCTCACATCGTATGTCCT ATATTAAGCATATGGGTGTCAAAGAGACACTTTACCACCACATGAATGCG GACATGGTTATTGCCACTGGCTCCTCGTTCCCATTGGTTGCAGTTACGGT GTCGTCTAAG back to top
|