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Properties
Property Name | Value |
TranscriptId | 613091 |
Track | FilteredModels2 |
ProteinId | 613005 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_70 | supercontig | scaffold_70:9242..10633 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11026 ID=mRNA_11026|Name=jgi.p|Nanoce1779_2|613005|organism=Nannochloropsis oceanica|type=mRNA|length=1392bp GTGAAAGTGGAGAAGCACGAATGATATGTCGATTTATGTCTTCCTCCTCC CCTTTCCTCGTCTTGTGGCCACATCTCCAGTCAGTGGTAGCACGGGCATC AAGAGTGTGGCGACTCCTATTGAGGATAAAGTTGTGCATGACCTGTCCTG TCGCTCCGACGCAACCAAATGGGGCCGCGGTAATTGTGTTCCGTGGGTCA ATTTTTTCCAGCTGAACACAAACGTCTTTTACCAATGAGTTTGCGCCTGC CTGTTGAAAACATTTACGAGTAGGCTCACGCAACATCACGAGATCCTTGG TGCATGTTGTTGTCGTCAGGCCGCGCGAGTGCGACGCCACGCAGCACCGA AACCTCTCAACGGCTTATCGCTGCCGTCGCTGCCAAATATTCAGAGATGG CCCATGGACAAGAGCCTTTTTCAGTCCTGCCCTGCCCACGCTAAAAATCT ACCCCCTCGCCTTGTATTATCTGCAGAAAGACCCTATTCTATACACGCTT TATATATCACTTTGACAGAGAGGAGGCGGACCCTTTGACCCTTCAAATTC CAGCATGATAAGTACTTCACCCCTTCTTCCCCTTGTTCTTCTTCTCCTGT ACTGCCTTGTCTAGTAGCCCTTCCTTTTTATCAGAATATCCATCCCAAAG TATCTCACCGTTATAAATCCACAGATATGCCATAGACTATTTCCTACCAA GAAATGTGCGGTCTCGCAATTTCACAGCACAGATATCACCCTCTGGTGTA GGAGCGACGAGTCCACGTCCGCGAGCACGACGGGGGGAGAAGAAATATGC ATGCAACGTCGAAGGATAATCCACAAAGGATGGAAAATAATAGACGCCAT CTTTAGATATTTGGACCTTCAAGAATGTACCGGATCCGAGAATGACCTTC CCTACTGTAAGTGGGGCTCAGCGAGAGGAAAAAAACATTTTTAGGGTAGA TAGAGGGGTGTTATACCTCCCGAATTATCTCGGCGGACGGGCCAGAAGGC AGGGTCGATTCTGAGATAAGCTGTATCTGGCATTGCCCCGATATAAATAC GTCGACCTCAATGTCCAAGCCATCCGCCTTTACCCCAGTAATCCTCGACA GGAGGACACCCAGTGCCAAAAAAGACTGCCGTCGCCAGGCTCTTACCGAG GCAGAACACTTTAAAGATTTTACGAAGTCTCACATAATTACGTGATTCAC TTTTGGGAGAAGGCGAATAGAGCGCAGAGAGGTATGATAAGGCGTAATGT GCGTAGAGGAGGTATAGACGAAGGATCTTGGTGCAGCGACTTAACGACTA AAGTTTAGCTTGAGAAGCCCAAAATGCCAACAGGGTTACCGGAATTAATA AAAGTTTCCCTCTAACGAATAACAAAGAAAAATCTACTGCAT back to topprotein sequence of jgi.p|Nanoce1779_2|613005 >mRNA_11026-protein ID=mRNA_11026-protein|Name=jgi.p|Nanoce1779_2|613005|organism=Nannochloropsis oceanica|type=polypeptide|length=71bp MSIYVFLLPFPRLVATSPVSGSTGIKSVATPIEDKVVHDLSCRSDATKWG RGNCVPWVNFFQLNTNVFYQ* back to topmRNA from alignment at scaffold_70:9242..10633+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11026 ID=mRNA_11026|Name=jgi.p|Nanoce1779_2|613005|organism=Nannochloropsis oceanica|type=mRNA|length=1392bp|location=Sequence derived from alignment at scaffold_70:9242..10633+ (Nannochloropsis oceanica) GTGAAAGTGGAGAAGCACGAATGATATGTCGATTTATGTCTTCCTCCTCC
CCTTTCCTCGTCTTGTGGCCACATCTCCAGTCAGTGGTAGCACGGGCATC
AAGAGTGTGGCGACTCCTATTGAGGATAAAGTTGTGCATGACCTGTCCTG
TCGCTCCGACGCAACCAAATGGGGCCGCGGTAATTGTGTTCCGTGGGTCA
ATTTTTTCCAGCTGAACACAAACGTCTTTTACCAATGAGTTTGCGCCTGC
CTGTTGAAAACATTTACGAGTAGGCTCACGCAACATCACGAGATCCTTGG
TGCATGTTGTTGTCGTCAGGCCGCGCGAGTGCGACGCCACGCAGCACCGA
AACCTCTCAACGGCTTATCGCTGCCGTCGCTGCCAAATATTCAGAGATGG
CCCATGGACAAGAGCCTTTTTCAGTCCTGCCCTGCCCACGCTAAAAATCT
ACCCCCTCGCCTTGTATTATCTGCAGAAAGACCCTATTCTATACACGCTT
TATATATCACTTTGACAGAGAGGAGGCGGACCCTTTGACCCTTCAAATTC
CAGCATGATAAGTACTTCACCCCTTCTTCCCCTTGTTCTTCTTCTCCTGT
ACTGCCTTGTCTAGTAGCCCTTCCTTTTTATCAGAATATCCATCCCAAAG
TATCTCACCGTTATAAATCCACAGATATGCCATAGACTATTTCCTACCAA
GAAATGTGCGGTCTCGCAATTTCACAGCACAGATATCACCCTCTGGTGTA
GGAGCGACGAGTCCACGTCCGCGAGCACGACGGGGGGAGAAGAAATATGC
ATGCAACGTCGAAGGATAATCCACAAAGGATGGAAAATAATAGACGCCAT
CTTTAGATATTTGGACCTTCAAGAATGTACCGGATCCGAGAATGACCTTC
CCTACTGTAAGTGGGGCTCAGCGAGAGGAAAAAAACATTTTTAGGGTAGA
TAGAGGGGTGTTATACCTCCCGAATTATCTCGGCGGACGGGCCAGAAGGC
AGGGTCGATTCTGAGATAAGCTGTATCTGGCATTGCCCCGATATAAATAC
GTCGACCTCAATGTCCAAGCCATCCGCCTTTACCCCAGTAATCCTCGACA
GGAGGACACCCAGTGCCAAAAAAGACTGCCGTCGCCAGGCTCTTACCGAG
GCAGAACACTTTAAAGATTTTACGAAGTCTCACATAATTACGTGATTCAC
TTTTGGGAGAAGGCGAATAGAGCGCAGAGAGGTATGATAAGGCGTAATGT
GCGTAGAGGAGGTATAGACGAAGGATCTTGGTGCAGCGACTTAACGACTA
AAGTTTAGCTTGAGAAGCCCAAAATGCCAACAGGGTTACCGGAATTAATA
AAAGTTTCCCTCTAACGAATAACAAAGAAAAATCTACTGCAT back to topCoding sequence (CDS) from alignment at scaffold_70:9242..10633+ >mRNA_11026 ID=mRNA_11026|Name=jgi.p|Nanoce1779_2|613005|organism=Nannochloropsis oceanica|type=CDS|length=213bp|location=Sequence derived from alignment at scaffold_70:9242..10633+ (Nannochloropsis oceanica) ATGTCGATTTATGTCTTCCTCCTCCCCTTTCCTCGTCTTGTGGCCACATC TCCAGTCAGTGGTAGCACGGGCATCAAGAGTGTGGCGACTCCTATTGAGG ATAAAGTTGTGCATGACCTGTCCTGTCGCTCCGACGCAACCAAATGGGGC CGCGGTAATTGTGTTCCGTGGGTCAATTTTTTCCAGCTGAACACAAACGT CTTTTACCAATGA back to top
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