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Properties
| Property Name | Value |
| TranscriptId | 603579 |
| Track | FilteredModels2 |
| ProteinId | 603493 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_27 | supercontig | scaffold_27:82950..85362 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8655 ID=mRNA_8655|Name=jgi.p|Nanoce1779_2|603493|organism=Nannochloropsis oceanica|type=mRNA|length=2157bp GCAGCAGCAGCAGCAGCAGCAGCACGAGCGAGAGGAGCAGTTCACAGCAC AATCACCACCCAAGCCCCTCCAACGCGACCGAGAAGGCGCTGGCATTGCC CGCCTCCTACAAAGATGGCTAGACGAAGAGGATGGAGCAACGAGGCGAGA TCTTCATGATAATGAGGAGGAGCATAAAGACAAGGACATAGAAAAAGAGG AGAATGATGCGTTAGCCTTAGCTGACCTAGGCAACAGCACAGGCAACTTA CAGGTATACAAAGCCCTTCGGGAAACTGCTGCGGCCCATAATATTACGGC CCGCGATTTTTGGACTTTGCAACGTTTGATTTTAACACTGTCTTTTAATA GATATGGGAACAAGCCGACCATCTTCCCGATGTGTGAAATATATAAAATA GTGGGGCCTTTGCGGTTGCATTGTGTCTTCATTGTCTCGTCGTATCGGTT TTACACGGCGCAGCCGCCGTCGTTGAGGAAGGTGGCGACTGAACGCTCGT ACAGTATTTATAGCGGAGGAGAGCAGGAGGAGAAGCAGCAGCAGGAGCAG GAGCCACCACACGTTTTACAAGACATTGGTGTGGTGCCTGAATTCATCGT TGACAAACCTTTAATTGAGAAGGAACGGCCTGTCTATCGATGGTGCTGGC GGCAGATTGTAAATATGTATGGCTTTACGTATCGGTGGAATGATGAAGGA GTAGAAGCGGCGACGATGGAACAGCAGCAACACACCCAAGAGGGAGAAAC AAGGGACAAAGATGGTGGTGCTCCTCCACCTCCCTGCAATGGTAAAGAGA ACAGCAGCAGCAGTAGCAGCACTGACAGCGCTCCCCTCCTTCCTCCCGAA CCTGGCTATGGGAATCAGAGCCTGCTGTGGGTGGAGGGGCCAATGGACAT TCCCTTTCGACGGCCCATTGGTCAAGTATTTACCTACTTCCCTCCCCCTT GCAGTAGTAGTAGTGGTACTGGTTCCAGAAATAGGAGTAGCAGGAGTGAT GGTGAACAAAAGTACGAGGGGAGAGGAGGAGGACATGTAGAGGGAGGAGG TCCTGAGCTGGTGGTTGTGATAAGAGGGACATTATACAGTGAGGAATGGA CGGCTAATTTTAGGTTGCAGCGGGCAGATGAGGATGAGGTGGAGAAGTAT GATTTTGAGGGTATTATGGTACCGAAGGGTTTTTTTGGGTTATTTACTGA AGTACTTCCGCAGGTCAATGATGCCCTTGTCCTCCACGGCAACAGCCACA TCACTCGGCTGACACTCACCGGCCATTCACTGGGCGCCAGCATTGCGCTT CTCCTCGCGGCATATTTCGGTCAAAAAAGACCCGACTTAAAAATATCCCT CATAACATTTGGTGGGCCCAACACCGTCGATAACATATTGTTTGAAAACT ACTGGAACCATCAAATAAATGTGCGCCAAGTGTTTTATATCGGCTCGGGG CTCGTGCCTCGGGACGAGAGAGACAGATGGTTGGAGGGAGAGAGAGAAGA GAGACGGCAGCAGCAGCAGCAGTACGAGTATCAGGATCGTGAACAACCTT CTGATTCCCACTTGAGCTTTGGGATCGGGGACATGGTTGCACAGATGCCC CCAGACTGTACTGCTGTATCCCCCTGTCCCTTGCTCCTCTTCCACGCCAC CAATGGTCTGACGACCAATGATGACCGCAGTACAAGTCCCAGTGGCTTCG ATATTGAAAACAATTTCTTCACGCGTCTCAGGCTGGCGCGTCCGCCGGGG TCGATTGTTTTTTATGCTTACGACTTAAAGGGACGTGGCTCTGTGAGCAC ATGGTTGGCGTACGAAGACTTTTTGACGCATGTCTGGACAAGATTAGATC GTGGTGTAATTTCAAGTCATGTTTGCGCGTACGCGTGTTGGGTATCTTCG CTGGGAGGTGGAAAGAATGGCGAAGAAACGCGATGTTTTTTCCCGGAGGA AGGGGAGGGACGAGGCTTGGGGGAGATCTGTGATTTACAATTGACGCGAG GTGAGCGTTTGGGAAAAACGCATCTTTAATTAGACCGAGAAAATAGGGGA GGAGGGAGTGTGAAATGTTGGAGAGCTTGAAAAAATAAGGGCTCTAAATA TTTTCAAGCAAGTCAATGAGAGGAGTATCATAAAATAAGTGGCATCCGGA GGTCTCG back to topprotein sequence of jgi.p|Nanoce1779_2|603493 >mRNA_8655-protein ID=mRNA_8655-protein|Name=jgi.p|Nanoce1779_2|603493|organism=Nannochloropsis oceanica|type=polypeptide|length=550bp MCEIYKIVGPLRLHCVFIVSSYRFYTAQPPSLRKVATERSYSIYSGGEQE EKQQQEQEPPHVLQDIGVVPEFIVDKPLIEKERPVYRWCWRQIVNMYGFT YRWNDEGVEAATMEQQQHTQEGETRDKDGGAPPPPCNGKENSSSSSSTDS APLLPPEPGYGNQSLLWVEGPMDIPFRRPIGQVFTYFPPPCSSSSGTGSR NRSSRSDGEQKYEGRGGGHVEGGGPELVVVIRGTLYSEEWTANFRLQRAD EDEVEKYDFEGIMVPKGFFGLFTEVLPQVNDALVLHGNSHITRLTLTGHS LGASIALLLAAYFGQKRPDLKISLITFGGPNTVDNILFENYWNHQINVRQ VFYIGSGLVPRDERDRWLEGEREERRQQQQQYEYQDREQPSDSHLSFGIG DMVAQMPPDCTAVSPCPLLLFHATNGLTTNDDRSTSPSGFDIENNFFTRL RLARPPGSIVFYAYDLKGRGSVSTWLAYEDFLTHVWTRLDRGVISSHVCA YACWVSSLGGGKNGEETRCFFPEEGEGRGLGEICDLQLTRGERLGKTHL* back to topmRNA from alignment at scaffold_27:82950..85362- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8655 ID=mRNA_8655|Name=jgi.p|Nanoce1779_2|603493|organism=Nannochloropsis oceanica|type=mRNA|length=2413bp|location=Sequence derived from alignment at scaffold_27:82950..85362- (Nannochloropsis oceanica) GCAGCAGCAGCAGCAGCAGCAGCACGAGCGAGAGGAGCAGTTCACAGCAC
AATCACCACCCAAGCCCCTCCAACGCGACCGAGAAGGCGCTGGCATTGCC
CGCCTCCTACAAAGATGGCTAGACGAAGAGGATGGAGCAACGAGGCGAGA
TCTTCATGATAATGAGGAGGAGCATAAAGACAAGGACATAGAAAAAGAGG
AGAATGATGCGTTAGCCTTAGCTGACCTAGGCAACAGCACAGGCAACTTA
CAGGTATACAAAGCCCTTCGGGAAACTGCTGCGGCCCATAATATTACGGC
CCGCGATTTTTGGACTTTGCAACGTTTGATTTTAACACTGTCTTTTAATA
GATATGGGAACAAGCCGACCATCTTCCCGATGTGTGAAATATATAAAATA
GTGGGGCCTTTGCGGTTGCATTGTGTCTTCATTGTCTCGTCGTATCGGTT
TTACACGGCGCAGCCGCCGTCGTTGAGGAAGGTGGCGACTGAACGCTCGT
ACAGTATTTATAGCGGAGGAGAGCAGGAGGAGAAGCAGCAGCAGGAGCAG
GAGCCACCACACGTTTTACAAGACATTGGTGTGGTGCCTGAATTCATCGT
TGACAAACCTTTAATTGAGAAGGAACGGCCTGTCTATCGATGGTGCTGGC
GGCAGGTACGATTGTCTATGAATGAGGAGGGAGAAATGGAGAGAGAGAGG
GAGGGAGGGCTGAAGTGACAGAATACGAACCATGTAATTACCCTTTTCCT
CCCTCCCTCCCTTCCTCGGCAGATTGTAAATATGTATGGCTTTACGTATC
GGTGGAATGATGAAGGAGTAGAAGCGGCGACGATGGAACAGCAGCAACAC
ACCCAAGAGGGAGAAACAAGGGACAAAGATGGTGGTGCTCCTCCACCTCC
CTGCAATGGTAAAGAGAACAGCAGCAGCAGTAGCAGCACTGACAGCGCTC
CCCTCCTTCCTCCCGAACCTGGCTATGGGAATCAGAGCCTGCTGTGGGTG
GAGGGGCCAATGGACATTCCCTTTCGACGGCCCATTGGTCAAGTATTTAC
CTACTTCCCTCCCCCTTGCAGTAGTAGTAGTGGTACTGGTTCCAGAAATA
GGAGTAGCAGGAGTGATGGTGAACAAAAGTACGAGGGGAGAGGAGGAGGA
CATGTAGAGGGAGGAGGTCCTGAGCTGGTGGTTGTGATAAGAGGGACATT
ATACAGTGAGGAATGGACGGCTAATTTTAGGTTGCAGCGGGCAGATGAGG
ATGAGGTGGAGAAGTATGATTTTGAGGGTATTATGGTACCGAAGGGTTTT
TTTGGGTTATTTACTGAAGTACTTCCGCAGGTAAGGGAGGGAGGAAGAGA
AAGTGAAATGGCTATTTTAAAAAATCGAAAAATCCTTACTTTACCTAAAT
CTCTTCTGTCACCTTCACGATATAAATCTCACGACGATCTCTCTCCTTCT
CTTCCTCCCCGTATTTCAGGTCAATGATGCCCTTGTCCTCCACGGCAACA
GCCACATCACTCGGCTGACACTCACCGGCCATTCACTGGGCGCCAGCATT
GCGCTTCTCCTCGCGGCATATTTCGGTCAAAAAAGACCCGACTTAAAAAT
ATCCCTCATAACATTTGGTGGGCCCAACACCGTCGATAACATATTGTTTG
AAAACTACTGGAACCATCAAATAAATGTGCGCCAAGTGTTTTATATCGGC
TCGGGGCTCGTGCCTCGGGACGAGAGAGACAGATGGTTGGAGGGAGAGAG
AGAAGAGAGACGGCAGCAGCAGCAGCAGTACGAGTATCAGGATCGTGAAC
AACCTTCTGATTCCCACTTGAGCTTTGGGATCGGGGACATGGTTGCACAG
ATGCCCCCAGACTGTACTGCTGTATCCCCCTGTCCCTTGCTCCTCTTCCA
CGCCACCAATGGTCTGACGACCAATGATGACCGCAGTACAAGTCCCAGTG
GCTTCGATATTGAAAACAATTTCTTCACGCGTCTCAGGCTGGCGCGTCCG
CCGGGGTCGATTGTTTTTTATGCTTACGACTTAAAGGGACGTGGCTCTGT
GAGCACATGGTTGGCGTACGAAGACTTTTTGACGCATGTCTGGACAAGAT
TAGATCGTGGTGTAATTTCAAGTCATGTTTGCGCGTACGCGTGTTGGGTA
TCTTCGCTGGGAGGTGGAAAGAATGGCGAAGAAACGCGATGTTTTTTCCC
GGAGGAAGGGGAGGGACGAGGCTTGGGGGAGATCTGTGATTTACAATTGA
CGCGAGGTGAGCGTTTGGGAAAAACGCATCTTTAATTAGACCGAGAAAAT
AGGGGAGGAGGGAGTGTGAAATGTTGGAGAGCTTGAAAAAATAAGGGCTC
TAAATATTTTCAAGCAAGTCAATGAGAGGAGTATCATAAAATAAGTGGCA
TCCGGAGGTCTCG back to topCoding sequence (CDS) from alignment at scaffold_27:82950..85362- >mRNA_8655 ID=mRNA_8655|Name=jgi.p|Nanoce1779_2|603493|organism=Nannochloropsis oceanica|type=CDS|length=4950bp|location=Sequence derived from alignment at scaffold_27:82950..85362- (Nannochloropsis oceanica) GTCAATGATGCCCTTGTCCTCCACGGCAACAGCCACATCACTCGGCTGAC ACTCACCGGCCATTCACTGGGCGCCAGCATTGCGCTTCTCCTCGCGGCAT ATTTCGGTCAAAAAAGACCCGACTTAAAAATATCCCTCATAACATTTGGT GGGCCCAACACCGTCGATAACATATTGTTTGAAAACTACTGGAACCATCA AATAAATGTGCGCCAAGTGTTTTATATCGGCTCGGGGCTCGTGCCTCGGG ACGAGAGAGACAGATGGTTGGAGGGAGAGAGAGAAGAGAGACGGCAGCAG CAGCAGCAGTACGAGTATCAGGATCGTGAACAACCTTCTGATTCCCACTT GAGCTTTGGGATCGGGGACATGGTTGCACAGATGCCCCCAGACTGTACTG CTGTATCCCCCTGTCCCTTGCTCCTCTTCCACGCCACCAATGGTCTGACG ACCAATGATGACCGCAGTACAAGTCCCAGTGGCTTCGATATTGAAAACAA TTTCTTCACGCGTCTCAGGCTGGCGCGTCCGCCGGGGTCGATTGTTTTTT ATGCTTACGACTTAAAGGGACGTGGCTCTGTGAGCACATGGTTGGCGTAC GAAGACTTTTTGACGCATGTCTGGACAAGATTAGATCGTGGTGTAATTTC AAGTCATGTTTGCGCGTACGCGTGTTGGGTATCTTCGCTGGGAGGTGGAA AGAATGGCGAAGAAACGCGATGTTTTTTCCCGGAGGAAGGGGAGGGACGA GGCTTGGGGGAGATCTGTGATTTACAATTGACGCGAGGTGAGCGTTTGGG AAAAACGCATCTTTAAATTGTAAATATGTATGGCTTTACGTATCGGTGGA ATGATGAAGGAGTAGAAGCGGCGACGATGGAACAGCAGCAACACACCCAA GAGGGAGAAACAAGGGACAAAGATGGTGGTGCTCCTCCACCTCCCTGCAA TGGTAAAGAGAACAGCAGCAGCAGTAGCAGCACTGACAGCGCTCCCCTCC TTCCTCCCGAACCTGGCTATGGGAATCAGAGCCTGCTGTGGGTGGAGGGG CCAATGGACATTCCCTTTCGACGGCCCATTGGTCAAGTATTTACCTACTT CCCTCCCCCTTGCAGTAGTAGTAGTGGTACTGGTTCCAGAAATAGGAGTA GCAGGAGTGATGGTGAACAAAAGTACGAGGGGAGAGGAGGAGGACATGTA GAGGGAGGAGGTCCTGAGCTGGTGGTTGTGATAAGAGGGACATTATACAG TGAGGAATGGACGGCTAATTTTAGGTTGCAGCGGGCAGATGAGGATGAGG TGGAGAAGTATGATTTTGAGGGTATTATGGTACCGAAGGGTTTTTTTGGG TTATTTACTGAAGTACTTCCGCAGATGTGTGAAATATATAAAATAGTGGG GCCTTTGCGGTTGCATTGTGTCTTCATTGTCTCGTCGTATCGGTTTTACA CGGCGCAGCCGCCGTCGTTGAGGAAGGTGGCGACTGAACGCTCGTACAGT ATTTATAGCGGAGGAGAGCAGGAGGAGAAGCAGCAGCAGGAGCAGGAGCC ACCACACGTTTTACAAGACATTGGTGTGGTGCCTGAATTCATCGTTGACA AACCTTTAATTGAGAAGGAACGGCCTGTCTATCGATGGTGCTGGCGGCAG GTCAATGATGCCCTTGTCCTCCACGGCAACAGCCACATCACTCGGCTGAC ACTCACCGGCCATTCACTGGGCGCCAGCATTGCGCTTCTCCTCGCGGCAT ATTTCGGTCAAAAAAGACCCGACTTAAAAATATCCCTCATAACATTTGGT GGGCCCAACACCGTCGATAACATATTGTTTGAAAACTACTGGAACCATCA AATAAATGTGCGCCAAGTGTTTTATATCGGCTCGGGGCTCGTGCCTCGGG ACGAGAGAGACAGATGGTTGGAGGGAGAGAGAGAAGAGAGACGGCAGCAG CAGCAGCAGTACGAGTATCAGGATCGTGAACAACCTTCTGATTCCCACTT GAGCTTTGGGATCGGGGACATGGTTGCACAGATGCCCCCAGACTGTACTG CTGTATCCCCCTGTCCCTTGCTCCTCTTCCACGCCACCAATGGTCTGACG ACCAATGATGACCGCAGTACAAGTCCCAGTGGCTTCGATATTGAAAACAA TTTCTTCACGCGTCTCAGGCTGGCGCGTCCGCCGGGGTCGATTGTTTTTT ATGCTTACGACTTAAAGGGACGTGGCTCTGTGAGCACATGGTTGGCGTAC GAAGACTTTTTGACGCATGTCTGGACAAGATTAGATCGTGGTGTAATTTC AAGTCATGTTTGCGCGTACGCGTGTTGGGTATCTTCGCTGGGAGGTGGAA AGAATGGCGAAGAAACGCGATGTTTTTTCCCGGAGGAAGGGGAGGGACGA GGCTTGGGGGAGATCTGTGATTTACAATTGACGCGAGGTGAGCGTTTGGG AAAAACGCATCTTTAAATTGTAAATATGTATGGCTTTACGTATCGGTGGA ATGATGAAGGAGTAGAAGCGGCGACGATGGAACAGCAGCAACACACCCAA GAGGGAGAAACAAGGGACAAAGATGGTGGTGCTCCTCCACCTCCCTGCAA TGGTAAAGAGAACAGCAGCAGCAGTAGCAGCACTGACAGCGCTCCCCTCC TTCCTCCCGAACCTGGCTATGGGAATCAGAGCCTGCTGTGGGTGGAGGGG CCAATGGACATTCCCTTTCGACGGCCCATTGGTCAAGTATTTACCTACTT CCCTCCCCCTTGCAGTAGTAGTAGTGGTACTGGTTCCAGAAATAGGAGTA GCAGGAGTGATGGTGAACAAAAGTACGAGGGGAGAGGAGGAGGACATGTA GAGGGAGGAGGTCCTGAGCTGGTGGTTGTGATAAGAGGGACATTATACAG TGAGGAATGGACGGCTAATTTTAGGTTGCAGCGGGCAGATGAGGATGAGG TGGAGAAGTATGATTTTGAGGGTATTATGGTACCGAAGGGTTTTTTTGGG TTATTTACTGAAGTACTTCCGCAGATGTGTGAAATATATAAAATAGTGGG GCCTTTGCGGTTGCATTGTGTCTTCATTGTCTCGTCGTATCGGTTTTACA CGGCGCAGCCGCCGTCGTTGAGGAAGGTGGCGACTGAACGCTCGTACAGT ATTTATAGCGGAGGAGAGCAGGAGGAGAAGCAGCAGCAGGAGCAGGAGCC ACCACACGTTTTACAAGACATTGGTGTGGTGCCTGAATTCATCGTTGACA AACCTTTAATTGAGAAGGAACGGCCTGTCTATCGATGGTGCTGGCGGCAG GTCAATGATGCCCTTGTCCTCCACGGCAACAGCCACATCACTCGGCTGAC ACTCACCGGCCATTCACTGGGCGCCAGCATTGCGCTTCTCCTCGCGGCAT ATTTCGGTCAAAAAAGACCCGACTTAAAAATATCCCTCATAACATTTGGT GGGCCCAACACCGTCGATAACATATTGTTTGAAAACTACTGGAACCATCA AATAAATGTGCGCCAAGTGTTTTATATCGGCTCGGGGCTCGTGCCTCGGG ACGAGAGAGACAGATGGTTGGAGGGAGAGAGAGAAGAGAGACGGCAGCAG CAGCAGCAGTACGAGTATCAGGATCGTGAACAACCTTCTGATTCCCACTT GAGCTTTGGGATCGGGGACATGGTTGCACAGATGCCCCCAGACTGTACTG CTGTATCCCCCTGTCCCTTGCTCCTCTTCCACGCCACCAATGGTCTGACG ACCAATGATGACCGCAGTACAAGTCCCAGTGGCTTCGATATTGAAAACAA TTTCTTCACGCGTCTCAGGCTGGCGCGTCCGCCGGGGTCGATTGTTTTTT ATGCTTACGACTTAAAGGGACGTGGCTCTGTGAGCACATGGTTGGCGTAC GAAGACTTTTTGACGCATGTCTGGACAAGATTAGATCGTGGTGTAATTTC AAGTCATGTTTGCGCGTACGCGTGTTGGGTATCTTCGCTGGGAGGTGGAA AGAATGGCGAAGAAACGCGATGTTTTTTCCCGGAGGAAGGGGAGGGACGA GGCTTGGGGGAGATCTGTGATTTACAATTGACGCGAGGTGAGCGTTTGGG AAAAACGCATCTTTAAATTGTAAATATGTATGGCTTTACGTATCGGTGGA ATGATGAAGGAGTAGAAGCGGCGACGATGGAACAGCAGCAACACACCCAA GAGGGAGAAACAAGGGACAAAGATGGTGGTGCTCCTCCACCTCCCTGCAA TGGTAAAGAGAACAGCAGCAGCAGTAGCAGCACTGACAGCGCTCCCCTCC TTCCTCCCGAACCTGGCTATGGGAATCAGAGCCTGCTGTGGGTGGAGGGG CCAATGGACATTCCCTTTCGACGGCCCATTGGTCAAGTATTTACCTACTT CCCTCCCCCTTGCAGTAGTAGTAGTGGTACTGGTTCCAGAAATAGGAGTA GCAGGAGTGATGGTGAACAAAAGTACGAGGGGAGAGGAGGAGGACATGTA GAGGGAGGAGGTCCTGAGCTGGTGGTTGTGATAAGAGGGACATTATACAG TGAGGAATGGACGGCTAATTTTAGGTTGCAGCGGGCAGATGAGGATGAGG TGGAGAAGTATGATTTTGAGGGTATTATGGTACCGAAGGGTTTTTTTGGG TTATTTACTGAAGTACTTCCGCAGATGTGTGAAATATATAAAATAGTGGG GCCTTTGCGGTTGCATTGTGTCTTCATTGTCTCGTCGTATCGGTTTTACA CGGCGCAGCCGCCGTCGTTGAGGAAGGTGGCGACTGAACGCTCGTACAGT ATTTATAGCGGAGGAGAGCAGGAGGAGAAGCAGCAGCAGGAGCAGGAGCC ACCACACGTTTTACAAGACATTGGTGTGGTGCCTGAATTCATCGTTGACA AACCTTTAATTGAGAAGGAACGGCCTGTCTATCGATGGTGCTGGCGGCAG back to top
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