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Properties
Property Name | Value |
TranscriptId | 569040 |
Track | FilteredModels2 |
ProteinId | 568954 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_30 | supercontig | scaffold_30:294127..295285 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9044 ID=mRNA_9044|Name=jgi.p|Nanoce1779_2|568954|organism=Nannochloropsis oceanica|type=mRNA|length=1023bp ATGGCGACGGGTGGGAAGCTTCTTGCCTACCTTGATCGGTTTTGGATCAC CAAGCACCATCATAAGAAAGGGGTTGATCCCTGCCAGGGCGTTATGTTTA TCTCGGAGCTTGTCCCACTAATTTGGCGGCAACGTGTGTTGAGGCGAAAT ATTTCTGTCTTGCTTCAACGTTTCTACAAGCAGCAGCTGGAGGACCATTT GCTGAAGGAAGTGTATTTGCACTACGTTGAGAGGGCGGGGGCGTTTGCGG CCCATGTCTCGGCGGGAAAGGTGGATGAGACAGCTGTTGCGGAGTACATT CGTGGTGTCCAACGGTGTGTGCAAGTGGAGGAGGCGATTTGGGAGCCTGT GAACCCATCGACGTCGCGAGGGGCGGTGAGGGTGGTGAGGAAAAGTATGT TAGAGAGTGAGCCGCATCATCAGATTCTGATGGCTTTCGCGCAGGCGGCG CTGGCTTTTCGGGCGGAGCGATTGGCGGATTTGGAGTTGCTGTATCGCCT GTTGGACAATGACGATGTGGACCCGAGTAAGGGGATCGAGGCTTTAAGGG AGATCTTTTTTGGGTTTGTCAAGGAGGTGGGGGCGAGGGAGGTGAAGAGG GCGAATGAGGAGGGGCGGCATCGACAGGCGTCACCCATACGTCCCGATAT GAGCCATATGCTGGCTCGGTCGAGCTTACCGGCCGACTACGTGTGTTCGG ATGCGATTCAGATGATGCTTGATCTCTATTCCCATTATCTCACCCTGGTT CGTGTCACCTTTCAGGATGACGCTCGTTTCTCCAAGGCCTTCAAGAAGGC GTGTGAGCATTTCATTAATGCTCTGCCTAACATGTCGGAGTCTTTGGCGA TTCACGCCCACTATTTTCTGGACAAGAATTGTCCGGAGTCACGAGGAACG GAGAGCATTGATATTGCCCTCGATAGCATTATCTTGCTCTTTAACTTCAT TCAGGACAAGGATTTGTTTCACCGGTCCTACGCCGATTGCTCGCCGCGAG AATCATCAGTTTCTCGTCCGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|568954 >mRNA_9044-protein ID=mRNA_9044-protein|Name=jgi.p|Nanoce1779_2|568954|organism=Nannochloropsis oceanica|type=polypeptide|length=341bp MATGGKLLAYLDRFWITKHHHKKGVDPCQGVMFISELVPLIWRQRVLRRN ISVLLQRFYKQQLEDHLLKEVYLHYVERAGAFAAHVSAGKVDETAVAEYI RGVQRCVQVEEAIWEPVNPSTSRGAVRVVRKSMLESEPHHQILMAFAQAA LAFRAERLADLELLYRLLDNDDVDPSKGIEALREIFFGFVKEVGAREVKR ANEEGRHRQASPIRPDMSHMLARSSLPADYVCSDAIQMMLDLYSHYLTLV RVTFQDDARFSKAFKKACEHFINALPNMSESLAIHAHYFLDKNCPESRGT ESIDIALDSIILLFNFIQDKDLFHRSYADCSPRESSVSRP* back to topmRNA from alignment at scaffold_30:294127..295285- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9044 ID=mRNA_9044|Name=jgi.p|Nanoce1779_2|568954|organism=Nannochloropsis oceanica|type=mRNA|length=1159bp|location=Sequence derived from alignment at scaffold_30:294127..295285- (Nannochloropsis oceanica) ATGGCGACGGGTGGGAAGCTTCTTGCCTACCTTGATCGGTTTTGGATCAC
CAAGCACCATCATAAGAAAGGGGTTGATCCCTGCCAGGGCGTTATGTTTA
TCTCGGAGCTTGTCCCACTAATTTGGCGGCAACGTGTGTTGAGGCGAAAT
ATTTCTGTCTTGCTTCAACGTGCGTTCAATGCTGTAGTTGCTGACTTGCG
CGAAGACCCTGCCGGACCTTCCCCTGAATACCTCGAAGTTCTTACGGCGT
GTGGTGGCTTCCTTCGTAGACCTGGGCACAACGCTCGAGCCTCTTCATCC
TGTAGGTTTCTACAAGCAGCAGCTGGAGGACCATTTGCTGAAGGAAGTGT
ATTTGCACTACGTTGAGAGGGCGGGGGCGTTTGCGGCCCATGTCTCGGCG
GGAAAGGTGGATGAGACAGCTGTTGCGGAGTACATTCGTGGTGTCCAACG
GTGTGTGCAAGTGGAGGAGGCGATTTGGGAGCCTGTGAACCCATCGACGT
CGCGAGGGGCGGTGAGGGTGGTGAGGAAAAGTATGTTAGAGAGTGAGCCG
CATCATCAGATTCTGATGGCTTTCGCGCAGGCGGCGCTGGCTTTTCGGGC
GGAGCGATTGGCGGATTTGGAGTTGCTGTATCGCCTGTTGGACAATGACG
ATGTGGACCCGAGTAAGGGGATCGAGGCTTTAAGGGAGATCTTTTTTGGG
TTTGTCAAGGAGGTGGGGGCGAGGGAGGTGAAGAGGGCGAATGAGGAGGG
GCGGCATCGACAGGCGTCACCCATACGTCCCGATATGAGCCATATGCTGG
CTCGGTCGAGCTTACCGGCCGACTACGTGTGTTCGGATGCGATTCAGATG
ATGCTTGATCTCTATTCCCATTATCTCACCCTGGTTCGTGTCACCTTTCA
GGATGACGCTCGTTTCTCCAAGGCCTTCAAGAAGGCGTGTGAGCATTTCA
TTAATGCTCTGCCTAACATGTCGGAGTCTTTGGCGATTCACGCCCACTAT
TTTCTGGACAAGAATTGTCCGGAGTCACGAGGAACGGAGAGCATTGATAT
TGCCCTCGATAGCATTATCTTGCTCTTTAACTTCATTCAGGACAAGGATT
TGTTTCACCGGTCCTACGCCGATTGCTCGCCGCGAGAATCATCAGTTTCT
CGTCCGTGA back to topCoding sequence (CDS) from alignment at scaffold_30:294127..295285- >mRNA_9044 ID=mRNA_9044|Name=jgi.p|Nanoce1779_2|568954|organism=Nannochloropsis oceanica|type=CDS|length=2046bp|location=Sequence derived from alignment at scaffold_30:294127..295285- (Nannochloropsis oceanica) GTTTCTACAAGCAGCAGCTGGAGGACCATTTGCTGAAGGAAGTGTATTTG CACTACGTTGAGAGGGCGGGGGCGTTTGCGGCCCATGTCTCGGCGGGAAA GGTGGATGAGACAGCTGTTGCGGAGTACATTCGTGGTGTCCAACGGTGTG TGCAAGTGGAGGAGGCGATTTGGGAGCCTGTGAACCCATCGACGTCGCGA GGGGCGGTGAGGGTGGTGAGGAAAAGTATGTTAGAGAGTGAGCCGCATCA TCAGATTCTGATGGCTTTCGCGCAGGCGGCGCTGGCTTTTCGGGCGGAGC GATTGGCGGATTTGGAGTTGCTGTATCGCCTGTTGGACAATGACGATGTG GACCCGAGTAAGGGGATCGAGGCTTTAAGGGAGATCTTTTTTGGGTTTGT CAAGGAGGTGGGGGCGAGGGAGGTGAAGAGGGCGAATGAGGAGGGGCGGC ATCGACAGGCGTCACCCATACGTCCCGATATGAGCCATATGCTGGCTCGG TCGAGCTTACCGGCCGACTACGTGTGTTCGGATGCGATTCAGATGATGCT TGATCTCTATTCCCATTATCTCACCCTGGTTCGTGTCACCTTTCAGGATG ACGCTCGTTTCTCCAAGGCCTTCAAGAAGGCGTGTGAGCATTTCATTAAT GCTCTGCCTAACATGTCGGAGTCTTTGGCGATTCACGCCCACTATTTTCT GGACAAGAATTGTCCGGAGTCACGAGGAACGGAGAGCATTGATATTGCCC TCGATAGCATTATCTTGCTCTTTAACTTCATTCAGGACAAGGATTTGTTT CACCGGTCCTACGCCGATTGCTCGCCGCGAGAATCATCAGTTTCTCGTCC GTGAATGGCGACGGGTGGGAAGCTTCTTGCCTACCTTGATCGGTTTTGGA TCACCAAGCACCATCATAAGAAAGGGGTTGATCCCTGCCAGGGCGTTATG TTTATCTCGGAGCTTGTCCCACTAATTTGGCGGCAACGTGTGTTGAGGCG AAATATTTCTGTCTTGCTTCAACGTTTCTACAAGCAGCAGCTGGAGGACC ATTTGCTGAAGGAAGTGTATTTGCACTACGTTGAGAGGGCGGGGGCGTTT GCGGCCCATGTCTCGGCGGGAAAGGTGGATGAGACAGCTGTTGCGGAGTA CATTCGTGGTGTCCAACGGTGTGTGCAAGTGGAGGAGGCGATTTGGGAGC CTGTGAACCCATCGACGTCGCGAGGGGCGGTGAGGGTGGTGAGGAAAAGT ATGTTAGAGAGTGAGCCGCATCATCAGATTCTGATGGCTTTCGCGCAGGC GGCGCTGGCTTTTCGGGCGGAGCGATTGGCGGATTTGGAGTTGCTGTATC GCCTGTTGGACAATGACGATGTGGACCCGAGTAAGGGGATCGAGGCTTTA AGGGAGATCTTTTTTGGGTTTGTCAAGGAGGTGGGGGCGAGGGAGGTGAA GAGGGCGAATGAGGAGGGGCGGCATCGACAGGCGTCACCCATACGTCCCG ATATGAGCCATATGCTGGCTCGGTCGAGCTTACCGGCCGACTACGTGTGT TCGGATGCGATTCAGATGATGCTTGATCTCTATTCCCATTATCTCACCCT GGTTCGTGTCACCTTTCAGGATGACGCTCGTTTCTCCAAGGCCTTCAAGA AGGCGTGTGAGCATTTCATTAATGCTCTGCCTAACATGTCGGAGTCTTTG GCGATTCACGCCCACTATTTTCTGGACAAGAATTGTCCGGAGTCACGAGG AACGGAGAGCATTGATATTGCCCTCGATAGCATTATCTTGCTCTTTAACT TCATTCAGGACAAGGATTTGTTTCACCGGTCCTACGCCGATTGCTCGCCG CGAGAATCATCAGTTTCTCGTCCGTGAATGGCGACGGGTGGGAAGCTTCT TGCCTACCTTGATCGGTTTTGGATCACCAAGCACCATCATAAGAAAGGGG TTGATCCCTGCCAGGGCGTTATGTTTATCTCGGAGCTTGTCCCACTAATT TGGCGGCAACGTGTGTTGAGGCGAAATATTTCTGTCTTGCTTCAAC back to top
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