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Properties
Property Name | Value |
TranscriptId | 605686 |
Track | FilteredModels2 |
ProteinId | 605600 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_32 | supercontig | scaffold_32:181328..183795 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9816 ID=mRNA_9816|Name=jgi.p|Nanoce1779_2|605600|organism=Nannochloropsis oceanica|type=mRNA|length=847bp ACAGACACCATGGCTTCTTCTACCACCGCTGCTGCAAAGGCGGTCTCCAC CCTCGCACGGCGCATCGCGAGGGTAATAAATAAAATCACCGGCCTCCACG AGGCCCAGGGACAGCAGGCCAAAACCTTCATGGCTGCGGCGGCTGCAGCG CCCAAGGCGCTGACCCTGCCCGACCTGGCTTACGGCTACGGGGAGCTCGA GCCCGTCATTTCCGGAGAAATCATGGAGATTCACCACAAGAAGCACCACC AGGCCTATATTACCAACTTTAATGTGGCCATGGGCAAGTTGGTCGAGGCC GAAGCCAAGGGTGACGTCTCGGCGATGATCGCCCTGCAGCCGGCCCTCCG CTTCAACGGCGGTGGCCATCTCAACCACTCCATTTTTTGGAAGAATTTGG CGCCCGCCCAAGGCAGGAGGCGGCGCGCCTTGGCACAGGCCATTGAGAGT CAGTTCGGCTCCCTGGCCGGCCTGCAAGATACAATGTCCGCACAGAGTGT GGCAGTCCAGGGCTCTGGATGGGGCTGGCTCGGGGTGGACAAGAAGATGA AGCGATTGGCCATCGTCGCTCTTCCCAACCAGGACCCTCTCGAAGCCACC ACCGGCCTCGTCCCTCTCGTCGGGATTGACGTCTGGGAACACGCCTACTA TTTGCAGTACAAGAACGTCCGCCCCGACTACGTGAAGGCCATCTGGAAGG TGGTCAACTGGAAAGATGCCGAGGCCCGCTTTGCCGCTGCAATGTCGTCT TAAGGAGAAGGATGAAGGGAGAGGACGAAGGGAGGTAGGCATGCAGAGTG AGAGGAGTTTGTAGAATGTGCACGTGGGTCAGCTGGCAAGAGGGAAG back to topprotein sequence of jgi.p|Nanoce1779_2|605600 >mRNA_9816-protein ID=mRNA_9816-protein|Name=jgi.p|Nanoce1779_2|605600|organism=Nannochloropsis oceanica|type=polypeptide|length=248bp MASSTTAAAKAVSTLARRIARVINKITGLHEAQGQQAKTFMAAAAAAPKA LTLPDLAYGYGELEPVISGEIMEIHHKKHHQAYITNFNVAMGKLVEAEAK GDVSAMIALQPALRFNGGGHLNHSIFWKNLAPAQGRRRRALAQAIESQFG SLAGLQDTMSAQSVAVQGSGWGWLGVDKKMKRLAIVALPNQDPLEATTGL VPLVGIDVWEHAYYLQYKNVRPDYVKAIWKVVNWKDAEARFAAAMSS* back to topmRNA from alignment at scaffold_32:181328..183795- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9816 ID=mRNA_9816|Name=jgi.p|Nanoce1779_2|605600|organism=Nannochloropsis oceanica|type=mRNA|length=2468bp|location=Sequence derived from alignment at scaffold_32:181328..183795- (Nannochloropsis oceanica) ACAGACACCATGGCTTCTTCTACCACCGCTGCTGCAAAGGCGGTCTCCAC
CCTCGCACGGCGCATCGCGAGGGTAATAAATAAAATGTGGAAGATGGGGC
AAGATGGAGGGGGGAGGCTAAGTGCTCTAGACGGCCTTTCACGAGCATAC
ATGTATGACACCTGCACGAGCCCCGGTGGCTCAGGTGCACAAGACTTGGG
CGTACCCAGCGCATGGGGGGACGATGAGATGCACAATACATTGTCGGCCA
GCTTCGGCCACGCGTCATTAAAGCTCTCCTAAGGGGTACACTCTCATGAA
AAACGAGTCATATCAAGGCTTGTCATGTCATGCCGTCTTGCGCACTTAGG
CCTTCCCTTCCTCCCCCTCTTCAAACAGCACCGGCCTCCACGAGGCCCAG
GGACAGCAGGCCAAAACCTTCATGGCTGCGGCGGCTGCAGCGGTAAGAGT
AGAGTGTGTAAGGGGATGGGCCACAGCACTCGTAGTCTCAGTCCCTCTCC
ATCGCTCTTAAGTTCCGCTATCGTTCCTTGACTATACAGGCTTCCATGGT
CAGATGCATAAAGAAATATTATTCCCTCTTCGACTCCCTTCTACTCACCT
CTCATTTTCCTTCCTCCCCTTCCTCCCTCCCCTTCCTCCCTCCCCTCCTC
GCCTCTGCCCAGCCCAAGGCGCTGACCCTGCCCGACCTGGCTTACGGCTA
CGGGGAGCTCGAGCCCGTCATTTCCGGAGGTATGTGCATGCAGAGCAAAG
CAAAGCAAGAGGAATGGAGGGAGGGGTAGAAGGAGGAGTCGAAGGAAGTA
CAGACAGAGGGGTGAAAGGAAGTACAGACAGAGGGGTGAAAGGAAGTATA
GACAGAGGGATAGAAGGAAGTATAGACAGAGGGATAGAAGGAAGTATAGA
CAGAGGGATAGAAGGAAGTATACAGAGAGGATTAGGTGTGGAAGGAAATG
TAGACAGAGGGAGGCGTCATGGCTTGATTCATTCGTTCGAAGGTAATTTT
GGTTCATGCTCTCCTCCTCTTTCCCTCCCTCCCTCCCTCCTTCGCGGACA
GAAATCATGGAGATTCACCACAAGAAGCACCACCAGGCCTATATTACCAA
CTTTAATGTGGCCATGGGCAAGTTGGTCGAGGCCGAAGCCAAGGGTGACG
TCTCGGCGATGATCGCCCTGCAGCCGGTGGGTATCCCTCCCTCCCTCCCT
CCCTCCCTCCCCCCCCTTCCTTCTCACCCCTCTCTCGCGACATGCCTCCT
CCCCGGCCGTGATGGCACGATTGATGCCTCCTTTCTGGACAACTCCTGTT
CCACCCTTTCTCTCTTCCTTTCTCTTCCCTCCATTTGCTGCACGTGCCTC
ACTTCATTCCACCCACCCCTCTTTCCTTCCCTCCCTCACTCCCTCCCTCC
CTCCCTCAGGCCCTCCGCTTCAACGGCGGTGGCCATCTCAACCACTCCAT
TTTTTGGAAGAATTTGGCGCCCGCCCAAGGCAGGAGGCGGCGTCCCCCCT
ACCGGTGCGTCCCCGCCCTATCCTCCTTCCTCCCTTCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCTCCTCCCTCCCTTTTTCTCCTTC
ATCCCCTCCCTCCCTCCTTCCCTCCCTCCGTAGGCGCCTTGGCACAGGCC
ATTGAGAGTCAGTTCGGCTCCCTGGCCGGCCTGCAAGATACAATGTCCGC
ACAGAGTGTGGCAGTCCAGGGCTCTGGATGGGGCTGGCTCGGGTAGGAGG
GAGAGAGAGAGGGAGAGAGGAGAGCACAGTACCACACTCCTTTGCCCTTC
ACTCTTCCATGCCTCCCTCCCTCCCTCCTTTCCTCCCTCCCTCCGTTCTT
CCAGGGTGGACAAGAAGATGAAGCGATTGGCCATCGTCGCTCTTCCCAAC
CAGGACCCTCTCGAAGCCACCACCGGCCTCGTCCCTCTCGTCGGGATTGA
CGTCTGGGAACACGGTACGTGCCCTCCCTCCTTCCCTCCCTCCTTCCCTC
CCTCCATTCCAATTATGACAAGCTGGGCAATAGGGCCGTGAGTATCACCT
GTACGTGTTCCCTGTCGCTCATCCTCCGTCTCCCCCCCCCTTTCCCCCCC
TCCCTCCCTCCCTCCCTCCAGCCTACTATTTGCAGTACAAGAACGTCCGC
CCCGACTACGTGAAGGCCATCTGGAAGGTATCAAGGCCAGCTTTTCAGTC
TCTTCTCCTTCCCTGCCTCCCCCCTCCCTCCCTTTCTTTCATGTTGCCTT
TTCGACCGAAACGCCTCAACCACGCCCGTATCTGTTCTAATCCTCCCTCC
TTCCTTCCCTCCCTCCCAAGGTGGTCAACTGGAAAGATGCCGAGGCCCGC
TTTGCCGCTGCAATGTCGTCTTAAGGAGAAGGATGAAGGGAGAGGACGAA
GGGAGGTAGGCATGCAGAGTGAGAGGAGTTTGTAGAATGTGCACGTGGGT
CAGCTGGCAAGAGGGAAG back to topCoding sequence (CDS) from alignment at scaffold_32:181328..183795- >mRNA_9816 ID=mRNA_9816|Name=jgi.p|Nanoce1779_2|605600|organism=Nannochloropsis oceanica|type=CDS|length=6696bp|location=Sequence derived from alignment at scaffold_32:181328..183795- (Nannochloropsis oceanica) GTGGTCAACTGGAAAGATGCCGAGGCCCGCTTTGCCGCTGCAATGTCGTC TTAACCTACTATTTGCAGTACAAGAACGTCCGCCCCGACTACGTGAAGGC CATCTGGAAGGGTGGACAAGAAGATGAAGCGATTGGCCATCGTCGCTCTT CCCAACCAGGACCCTCTCGAAGCCACCACCGGCCTCGTCCCTCTCGTCGG GATTGACGTCTGGGAACACGGCGCCTTGGCACAGGCCATTGAGAGTCAGT TCGGCTCCCTGGCCGGCCTGCAAGATACAATGTCCGCACAGAGTGTGGCA GTCCAGGGCTCTGGATGGGGCTGGCTCGGGCCCTCCGCTTCAACGGCGGT GGCCATCTCAACCACTCCATTTTTTGGAAGAATTTGGCGCCCGCCCAAGG CAGGAGGCGGCAAATCATGGAGATTCACCACAAGAAGCACCACCAGGCCT ATATTACCAACTTTAATGTGGCCATGGGCAAGTTGGTCGAGGCCGAAGCC AAGGGTGACGTCTCGGCGATGATCGCCCTGCAGCCGCCCAAGGCGCTGAC CCTGCCCGACCTGGCTTACGGCTACGGGGAGCTCGAGCCCGTCATTTCCG GAGCACCGGCCTCCACGAGGCCCAGGGACAGCAGGCCAAAACCTTCATGG CTGCGGCGGCTGCAGCGATGGCTTCTTCTACCACCGCTGCTGCAAAGGCG GTCTCCACCCTCGCACGGCGCATCGCGAGGGTAATAAATAAAATGTGGTC AACTGGAAAGATGCCGAGGCCCGCTTTGCCGCTGCAATGTCGTCTTAACC TACTATTTGCAGTACAAGAACGTCCGCCCCGACTACGTGAAGGCCATCTG GAAGGGTGGACAAGAAGATGAAGCGATTGGCCATCGTCGCTCTTCCCAAC CAGGACCCTCTCGAAGCCACCACCGGCCTCGTCCCTCTCGTCGGGATTGA CGTCTGGGAACACGGCGCCTTGGCACAGGCCATTGAGAGTCAGTTCGGCT CCCTGGCCGGCCTGCAAGATACAATGTCCGCACAGAGTGTGGCAGTCCAG GGCTCTGGATGGGGCTGGCTCGGGCCCTCCGCTTCAACGGCGGTGGCCAT CTCAACCACTCCATTTTTTGGAAGAATTTGGCGCCCGCCCAAGGCAGGAG GCGGCAAATCATGGAGATTCACCACAAGAAGCACCACCAGGCCTATATTA CCAACTTTAATGTGGCCATGGGCAAGTTGGTCGAGGCCGAAGCCAAGGGT GACGTCTCGGCGATGATCGCCCTGCAGCCGCCCAAGGCGCTGACCCTGCC CGACCTGGCTTACGGCTACGGGGAGCTCGAGCCCGTCATTTCCGGAGCAC CGGCCTCCACGAGGCCCAGGGACAGCAGGCCAAAACCTTCATGGCTGCGG CGGCTGCAGCGATGGCTTCTTCTACCACCGCTGCTGCAAAGGCGGTCTCC ACCCTCGCACGGCGCATCGCGAGGGTAATAAATAAAATGTGGTCAACTGG AAAGATGCCGAGGCCCGCTTTGCCGCTGCAATGTCGTCTTAACCTACTAT TTGCAGTACAAGAACGTCCGCCCCGACTACGTGAAGGCCATCTGGAAGGG TGGACAAGAAGATGAAGCGATTGGCCATCGTCGCTCTTCCCAACCAGGAC CCTCTCGAAGCCACCACCGGCCTCGTCCCTCTCGTCGGGATTGACGTCTG GGAACACGGCGCCTTGGCACAGGCCATTGAGAGTCAGTTCGGCTCCCTGG CCGGCCTGCAAGATACAATGTCCGCACAGAGTGTGGCAGTCCAGGGCTCT GGATGGGGCTGGCTCGGGCCCTCCGCTTCAACGGCGGTGGCCATCTCAAC CACTCCATTTTTTGGAAGAATTTGGCGCCCGCCCAAGGCAGGAGGCGGCA AATCATGGAGATTCACCACAAGAAGCACCACCAGGCCTATATTACCAACT TTAATGTGGCCATGGGCAAGTTGGTCGAGGCCGAAGCCAAGGGTGACGTC TCGGCGATGATCGCCCTGCAGCCGCCCAAGGCGCTGACCCTGCCCGACCT GGCTTACGGCTACGGGGAGCTCGAGCCCGTCATTTCCGGAGCACCGGCCT CCACGAGGCCCAGGGACAGCAGGCCAAAACCTTCATGGCTGCGGCGGCTG CAGCGATGGCTTCTTCTACCACCGCTGCTGCAAAGGCGGTCTCCACCCTC GCACGGCGCATCGCGAGGGTAATAAATAAAATGTGGTCAACTGGAAAGAT GCCGAGGCCCGCTTTGCCGCTGCAATGTCGTCTTAACCTACTATTTGCAG TACAAGAACGTCCGCCCCGACTACGTGAAGGCCATCTGGAAGGGTGGACA AGAAGATGAAGCGATTGGCCATCGTCGCTCTTCCCAACCAGGACCCTCTC GAAGCCACCACCGGCCTCGTCCCTCTCGTCGGGATTGACGTCTGGGAACA CGGCGCCTTGGCACAGGCCATTGAGAGTCAGTTCGGCTCCCTGGCCGGCC TGCAAGATACAATGTCCGCACAGAGTGTGGCAGTCCAGGGCTCTGGATGG GGCTGGCTCGGGCCCTCCGCTTCAACGGCGGTGGCCATCTCAACCACTCC ATTTTTTGGAAGAATTTGGCGCCCGCCCAAGGCAGGAGGCGGCAAATCAT GGAGATTCACCACAAGAAGCACCACCAGGCCTATATTACCAACTTTAATG TGGCCATGGGCAAGTTGGTCGAGGCCGAAGCCAAGGGTGACGTCTCGGCG ATGATCGCCCTGCAGCCGCCCAAGGCGCTGACCCTGCCCGACCTGGCTTA CGGCTACGGGGAGCTCGAGCCCGTCATTTCCGGAGCACCGGCCTCCACGA GGCCCAGGGACAGCAGGCCAAAACCTTCATGGCTGCGGCGGCTGCAGCGA TGGCTTCTTCTACCACCGCTGCTGCAAAGGCGGTCTCCACCCTCGCACGG CGCATCGCGAGGGTAATAAATAAAATGTGGTCAACTGGAAAGATGCCGAG GCCCGCTTTGCCGCTGCAATGTCGTCTTAACCTACTATTTGCAGTACAAG AACGTCCGCCCCGACTACGTGAAGGCCATCTGGAAGGGTGGACAAGAAGA TGAAGCGATTGGCCATCGTCGCTCTTCCCAACCAGGACCCTCTCGAAGCC ACCACCGGCCTCGTCCCTCTCGTCGGGATTGACGTCTGGGAACACGGCGC CTTGGCACAGGCCATTGAGAGTCAGTTCGGCTCCCTGGCCGGCCTGCAAG ATACAATGTCCGCACAGAGTGTGGCAGTCCAGGGCTCTGGATGGGGCTGG CTCGGGCCCTCCGCTTCAACGGCGGTGGCCATCTCAACCACTCCATTTTT TGGAAGAATTTGGCGCCCGCCCAAGGCAGGAGGCGGCAAATCATGGAGAT TCACCACAAGAAGCACCACCAGGCCTATATTACCAACTTTAATGTGGCCA TGGGCAAGTTGGTCGAGGCCGAAGCCAAGGGTGACGTCTCGGCGATGATC GCCCTGCAGCCGCCCAAGGCGCTGACCCTGCCCGACCTGGCTTACGGCTA CGGGGAGCTCGAGCCCGTCATTTCCGGAGCACCGGCCTCCACGAGGCCCA GGGACAGCAGGCCAAAACCTTCATGGCTGCGGCGGCTGCAGCGATGGCTT CTTCTACCACCGCTGCTGCAAAGGCGGTCTCCACCCTCGCACGGCGCATC GCGAGGGTAATAAATAAAATGTGGTCAACTGGAAAGATGCCGAGGCCCGC TTTGCCGCTGCAATGTCGTCTTAACCTACTATTTGCAGTACAAGAACGTC CGCCCCGACTACGTGAAGGCCATCTGGAAGGGTGGACAAGAAGATGAAGC GATTGGCCATCGTCGCTCTTCCCAACCAGGACCCTCTCGAAGCCACCACC GGCCTCGTCCCTCTCGTCGGGATTGACGTCTGGGAACACGGCGCCTTGGC ACAGGCCATTGAGAGTCAGTTCGGCTCCCTGGCCGGCCTGCAAGATACAA TGTCCGCACAGAGTGTGGCAGTCCAGGGCTCTGGATGGGGCTGGCTCGGG CCCTCCGCTTCAACGGCGGTGGCCATCTCAACCACTCCATTTTTTGGAAG AATTTGGCGCCCGCCCAAGGCAGGAGGCGGCAAATCATGGAGATTCACCA CAAGAAGCACCACCAGGCCTATATTACCAACTTTAATGTGGCCATGGGCA AGTTGGTCGAGGCCGAAGCCAAGGGTGACGTCTCGGCGATGATCGCCCTG CAGCCGCCCAAGGCGCTGACCCTGCCCGACCTGGCTTACGGCTACGGGGA GCTCGAGCCCGTCATTTCCGGAGCACCGGCCTCCACGAGGCCCAGGGACA GCAGGCCAAAACCTTCATGGCTGCGGCGGCTGCAGCGATGGCTTCTTCTA CCACCGCTGCTGCAAAGGCGGTCTCCACCCTCGCACGGCGCATCGCGAGG GTAATAAATAAAATGTGGTCAACTGGAAAGATGCCGAGGCCCGCTTTGCC GCTGCAATGTCGTCTTAACCTACTATTTGCAGTACAAGAACGTCCGCCCC GACTACGTGAAGGCCATCTGGAAGGGTGGACAAGAAGATGAAGCGATTGG CCATCGTCGCTCTTCCCAACCAGGACCCTCTCGAAGCCACCACCGGCCTC GTCCCTCTCGTCGGGATTGACGTCTGGGAACACGGCGCCTTGGCACAGGC CATTGAGAGTCAGTTCGGCTCCCTGGCCGGCCTGCAAGATACAATGTCCG CACAGAGTGTGGCAGTCCAGGGCTCTGGATGGGGCTGGCTCGGGCCCTCC GCTTCAACGGCGGTGGCCATCTCAACCACTCCATTTTTTGGAAGAATTTG GCGCCCGCCCAAGGCAGGAGGCGGCAAATCATGGAGATTCACCACAAGAA GCACCACCAGGCCTATATTACCAACTTTAATGTGGCCATGGGCAAGTTGG TCGAGGCCGAAGCCAAGGGTGACGTCTCGGCGATGATCGCCCTGCAGCCG CCCAAGGCGCTGACCCTGCCCGACCTGGCTTACGGCTACGGGGAGCTCGA GCCCGTCATTTCCGGAGCACCGGCCTCCACGAGGCCCAGGGACAGCAGGC CAAAACCTTCATGGCTGCGGCGGCTGCAGCGATGGCTTCTTCTACCACCG CTGCTGCAAAGGCGGTCTCCACCCTCGCACGGCGCATCGCGAGGGTAATA AATAAAATGTGGTCAACTGGAAAGATGCCGAGGCCCGCTTTGCCGCTGCA ATGTCGTCTTAACCTACTATTTGCAGTACAAGAACGTCCGCCCCGACTAC GTGAAGGCCATCTGGAAGGGTGGACAAGAAGATGAAGCGATTGGCCATCG TCGCTCTTCCCAACCAGGACCCTCTCGAAGCCACCACCGGCCTCGTCCCT CTCGTCGGGATTGACGTCTGGGAACACGGCGCCTTGGCACAGGCCATTGA GAGTCAGTTCGGCTCCCTGGCCGGCCTGCAAGATACAATGTCCGCACAGA GTGTGGCAGTCCAGGGCTCTGGATGGGGCTGGCTCGGGCCCTCCGCTTCA ACGGCGGTGGCCATCTCAACCACTCCATTTTTTGGAAGAATTTGGCGCCC GCCCAAGGCAGGAGGCGGCAAATCATGGAGATTCACCACAAGAAGCACCA CCAGGCCTATATTACCAACTTTAATGTGGCCATGGGCAAGTTGGTCGAGG CCGAAGCCAAGGGTGACGTCTCGGCGATGATCGCCCTGCAGCCGCCCAAG GCGCTGACCCTGCCCGACCTGGCTTACGGCTACGGGGAGCTCGAGCCCGT CATTTCCGGAGCACCGGCCTCCACGAGGCCCAGGGACAGCAGGCCAAAAC CTTCATGGCTGCGGCGGCTGCAGCGATGGCTTCTTCTACCACCGCTGCTG CAAAGGCGGTCTCCACCCTCGCACGGCGCATCGCGAGGGTAATAAATAAA ATGTGGTCAACTGGAAAGATGCCGAGGCCCGCTTTGCCGCTGCAATGTCG TCTTAACCTACTATTTGCAGTACAAGAACGTCCGCCCCGACTACGTGAAG GCCATCTGGAAGGGTGGACAAGAAGATGAAGCGATTGGCCATCGTCGCTC TTCCCAACCAGGACCCTCTCGAAGCCACCACCGGCCTCGTCCCTCTCGTC GGGATTGACGTCTGGGAACACGGCGCCTTGGCACAGGCCATTGAGAGTCA GTTCGGCTCCCTGGCCGGCCTGCAAGATACAATGTCCGCACAGAGTGTGG CAGTCCAGGGCTCTGGATGGGGCTGGCTCGGGCCCTCCGCTTCAACGGCG GTGGCCATCTCAACCACTCCATTTTTTGGAAGAATTTGGCGCCCGCCCAA GGCAGGAGGCGGCAAATCATGGAGATTCACCACAAGAAGCACCACCAGGC CTATATTACCAACTTTAATGTGGCCATGGGCAAGTTGGTCGAGGCCGAAG CCAAGGGTGACGTCTCGGCGATGATCGCCCTGCAGCCGCCCAAGGCGCTG ACCCTGCCCGACCTGGCTTACGGCTACGGGGAGCTCGAGCCCGTCATTTC CGGAGCACCGGCCTCCACGAGGCCCAGGGACAGCAGGCCAAAACCTTCAT GGCTGCGGCGGCTGCAGCGATGGCTTCTTCTACCACCGCTGCTGCAAAGG CGGTCTCCACCCTCGCACGGCGCATCGCGAGGGTAATAAATAAAAT back to top
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