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Properties
Property Name | Value |
TranscriptId | 273475 |
Track | FilteredModels2 |
ProteinId | 273389 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_36 | supercontig | scaffold_36:54760..55620 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9144 ID=mRNA_9144|Name=jgi.p|Nanoce1779_2|273389|organism=Nannochloropsis oceanica|type=mRNA|length=861bp AAAGGAAGGAAGGGAAAAGGAGGAAGAAAAAAGGAAGGGAAGGAGGGAGT AGGCAATTGTGTGTGAATGAGAGAGAGGAGGGGGGGGGGTAGGGAGAGTC TGTGTACTGTATCTTGAGACAACTTTTATGTTATTTGATGTGTTGTGGTG CGGCAAGAGGGTGCGTGCAGTGGGCGCTTCTCGCTTTCCCATTTTTTCCT TGTGGCGCTCGAAATTGAGGATGATTAGGGAAGATATATATGTATGCATG TGTGAATGTGTGAGAGAGAGGGCGGTAGAGAGTGAGGAGTATAGAAAGAG TGAAGGGGGAAGATGCATGATTTTACACGTCCTCTTCATGTCTTACGTGA ATGCCCTCGTCTCCTTCTTGACTTTTTTTTGTTTCTTAGGACGTAGTGAA AGTGCTGTCAGTCGAACGCGGGAGGGAGGGAGGGAGGGAGGGAGCGAGGG AGCGAGGGAGCGAGGGAGGGAGGGACGGGGGGAGGACGCTCTTGGGTGTT TCTTTATTCATTCTTTCCCAGGACGGAGAGAAAGTGGTGGAGCAAGAGGG GGAAGAGGAGAAGGAGTAGAAGGAGGACGGGGAGAAGGACGAGGAGATTT GAGCTTCTGGGAGGTTGTTGTAGGACAAGAAGGAAGCAGGGGAGAAAGAA GGCTGTGGCCAGCTTTTCATATGGGAAAAAAAAAGGAAAAGGAAAAGCAA AGCATTTATCCCTCCTTTTGGACGAAGGAAGGGGAAAGGATGGAAGAAAA ATATTAGGCGCGAAAGAAAAAGGAAACCGGGCACAAGGAGTTAAATCCCT CCGAAAAAGAAGAACGAAGAATGAAACACCTGCACTGAAGGCAGGCCGCG GGAAAGGGAAG back to topprotein sequence of jgi.p|Nanoce1779_2|273389 >mRNA_9144-protein ID=mRNA_9144-protein|Name=jgi.p|Nanoce1779_2|273389|organism=Nannochloropsis oceanica|type=polypeptide|length=210bp MLFDVLWCGKRVRAVGASRFPIFSLWRSKLRMIREDIYVCMCECVRERAV ESEEYRKSEGGRCMILHVLFMSYVNALVSFLTFFCFLGRSESAVSRTREG GREGGSEGARERGREGRGEDALGCFFIHSFPGRRESGGARGGRGEGVEGG RGEGRGDLSFWEVVVGQEGSRGERRLWPAFHMGKKKEKEKQSIYPSFWTK EGERMEEKY* back to topmRNA from alignment at scaffold_36:54760..55620+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9144 ID=mRNA_9144|Name=jgi.p|Nanoce1779_2|273389|organism=Nannochloropsis oceanica|type=mRNA|length=861bp|location=Sequence derived from alignment at scaffold_36:54760..55620+ (Nannochloropsis oceanica) AAAGGAAGGAAGGGAAAAGGAGGAAGAAAAAAGGAAGGGAAGGAGGGAGT
AGGCAATTGTGTGTGAATGAGAGAGAGGAGGGGGGGGGGTAGGGAGAGTC
TGTGTACTGTATCTTGAGACAACTTTTATGTTATTTGATGTGTTGTGGTG
CGGCAAGAGGGTGCGTGCAGTGGGCGCTTCTCGCTTTCCCATTTTTTCCT
TGTGGCGCTCGAAATTGAGGATGATTAGGGAAGATATATATGTATGCATG
TGTGAATGTGTGAGAGAGAGGGCGGTAGAGAGTGAGGAGTATAGAAAGAG
TGAAGGGGGAAGATGCATGATTTTACACGTCCTCTTCATGTCTTACGTGA
ATGCCCTCGTCTCCTTCTTGACTTTTTTTTGTTTCTTAGGACGTAGTGAA
AGTGCTGTCAGTCGAACGCGGGAGGGAGGGAGGGAGGGAGGGAGCGAGGG
AGCGAGGGAGCGAGGGAGGGAGGGACGGGGGGAGGACGCTCTTGGGTGTT
TCTTTATTCATTCTTTCCCAGGACGGAGAGAAAGTGGTGGAGCAAGAGGG
GGAAGAGGAGAAGGAGTAGAAGGAGGACGGGGAGAAGGACGAGGAGATTT
GAGCTTCTGGGAGGTTGTTGTAGGACAAGAAGGAAGCAGGGGAGAAAGAA
GGCTGTGGCCAGCTTTTCATATGGGAAAAAAAAAGGAAAAGGAAAAGCAA
AGCATTTATCCCTCCTTTTGGACGAAGGAAGGGGAAAGGATGGAAGAAAA
ATATTAGGCGCGAAAGAAAAAGGAAACCGGGCACAAGGAGTTAAATCCCT
CCGAAAAAGAAGAACGAAGAATGAAACACCTGCACTGAAGGCAGGCCGCG
GGAAAGGGAAG back to topCoding sequence (CDS) from alignment at scaffold_36:54760..55620+ >mRNA_9144 ID=mRNA_9144|Name=jgi.p|Nanoce1779_2|273389|organism=Nannochloropsis oceanica|type=CDS|length=630bp|location=Sequence derived from alignment at scaffold_36:54760..55620+ (Nannochloropsis oceanica) ATGTTATTTGATGTGTTGTGGTGCGGCAAGAGGGTGCGTGCAGTGGGCGC TTCTCGCTTTCCCATTTTTTCCTTGTGGCGCTCGAAATTGAGGATGATTA GGGAAGATATATATGTATGCATGTGTGAATGTGTGAGAGAGAGGGCGGTA GAGAGTGAGGAGTATAGAAAGAGTGAAGGGGGAAGATGCATGATTTTACA CGTCCTCTTCATGTCTTACGTGAATGCCCTCGTCTCCTTCTTGACTTTTT TTTGTTTCTTAGGACGTAGTGAAAGTGCTGTCAGTCGAACGCGGGAGGGA GGGAGGGAGGGAGGGAGCGAGGGAGCGAGGGAGCGAGGGAGGGAGGGACG GGGGGAGGACGCTCTTGGGTGTTTCTTTATTCATTCTTTCCCAGGACGGA GAGAAAGTGGTGGAGCAAGAGGGGGAAGAGGAGAAGGAGTAGAAGGAGGA CGGGGAGAAGGACGAGGAGATTTGAGCTTCTGGGAGGTTGTTGTAGGACA AGAAGGAAGCAGGGGAGAAAGAAGGCTGTGGCCAGCTTTTCATATGGGAA AAAAAAAGGAAAAGGAAAAGCAAAGCATTTATCCCTCCTTTTGGACGAAG GAAGGGGAAAGGATGGAAGAAAAATATTAG back to top
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