jgi.p|Nanoce1779_2|674722, mRNA_10498 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|674722
Unique Name	mRNA_10498
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4494
Alignment location	scaffold_52:92673..98714 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	674808
Track	FilteredModels2
ProteinId	674722

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_52	supercontig	scaffold_52:92673..98714 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|674722	gene_10498	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|674722	mRNA_10498-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_10498	CDS_10498	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_52:92673..98714+
coding sequence from alignment at scaffold_52:92673..98714+

mRNA sequence

>mRNA_10498 ID=mRNA_10498|Name=jgi.p|Nanoce1779_2|674722|organism=Nannochloropsis oceanica|type=mRNA|length=4494bp
ATCATCGTGTCAAACAGCTCGATTCGTGTTCGAAATTGGGCGTCCGAGTT
TGGAAATCGAAATATCAAACTAGTTGGAAGGCATATTTTTTGCCGGGCTA
TTGGTATTTGCCTTCATCATGTGGCGGTCGAAATGTGTGGTGGCATATGC
TTTTGCATTACACTTCTTCGCCTTTGTTCTCATTGGAAAAATGATTCATT
TGGAAGAAGGAGATTTTTTTCTACCAGCAAAATTTCTTGAGAGGACTTAT
GAGCCCACTTTGGCGGTGGGACAAGAGAAAAAAGTGATCGCTGCCTACTT
TCCTCAGTTTCATGAATTCGAAGAGAATAACCAATTTTGGGGAAAAGGCT
TCACAGATTTCTCCAATGTCGCAAAGGTTCACCAAAATCGGTACGGTCAG
GCAATTATTAGGCCTGCCGAACGAATGGGCTTCTATGACTTGATGTCATC
CAGCCAAAGGCGTTTCCAGGGGGAGCTAGCAAGGAAGTATAATATTCATG
GATTTGCCATATACCATTACTGGTTCGGCACCAAAGCTATCATGGAAAAG
CCACTGGAAATGATGCTCTTAGACGGCTACCCTGACATTCCTTTCTGTCT
AACTTGGGCAAACGAGCCTTGGACGCGACAGTGGGATGAAAAGGACGGGT
CAGAAATTCTCCTCAATCAGACTTACGACCGAGAAACCTGGAAGCCTCAC
TTTGACTGGCTTTTACCCTATCTAGAGCATACAAATTATTTGAAATACAA
GGGCCTACCAATCATCCTAATTTACAAAGCGGACGATATTCCCGATTTGG
AACAAATGATAAGTCAGTGGAAAACGTGGGCGAGGAATGCAAATTTGACG
GGCCTCCACGTGATACAAATCAATGGTGTAGGCTGGAATGGATCGTCTTC
TTGGGAATTGCAGCCAGGAATGGATTCTCTGGTCGAATTCTTCCCAAATT
ACATTTCGGCGTCCGGCTCTACTATGAACAACCTTGTGAGCACCCAAAAA
AAGGCAGACAGTTACTTCTACGGCGCTTCCGCTGCCTTTGACAATTCTCC
TAGATACTCCGACCCTACCGCTGGTGCTACGATCTATCCATTTCATCCGT
CACATTTGTATTTCTGGCTCCGTCAAAATCTGGCCAGGACGGAGCCTGGT
GGATTTGTGTTTTTAAATGCATGGAATGAGTGGGGACAGGGGTCTGCCAT
TGAGCCAAGCATCCAATGGGGTAGGCGATGGCTTGAAGCCATCCAAAGAG
CTGTCTCCGATGAACAGCGAGGCCATGTATCAAAAACCACGCCTGACGGT
TATGTGAGCTCTGTGCCTTTGGAGGAGAACCCTGGTATGCCTGTAAGCCA
TAAGGCGACACAAGATAGAGTGTGTATTATCGTCCGCACCTATAAGATCC
ATGCAACAGGCATCTACAACATCCATCAAATGCTCAACACTTTGCTTGCT
TTGAACCACAAAAACTGGAGAGCTTTCATCGTCAATACAGATGTAACTCC
ATTTGAGGATCTGCACACTATCCTTGACCAATATAAACATAAAGGAAAGA
TTGAAATTTCTCCCCTAACTGCCACTAGGAGCTTTGCAGATGACCCTAAT
TCGGCCTATGATATGACAGATAGAGCCATAGAGCACCACTGTGGTTCTAG
CAAGGAGTTCAAATGGCTACTAGTCACTAACGGAGACAATTGGTACACTC
CCGATGCTTTGGATTTCCTTCCTAATAATGTCGATCTTGTCTTAATGAAT
TTTTATTCACGATACTCGATCATGAGTGCAATTGTGTGGACAAATGCCCC
GGACGATCAGGCGTGCTGCGAAAGGCTTCAAAACTATCAATGCATGTTCT
CTACCCTCTCGGAATCATCGGCATGCTTATCATAATATGGAATGTCATTA
CACTCGCTGCATTCCCTCCACGTCTTGGACATGTCTTTTCCATCCCGACA
GCAGGTAGATGCTGATTTAAAGAGCCATTCTTTTTCTTTCTTGACCTCTT
GCACATAGTACACAGGAAACTTTCCCTCACTCTTCCTCGCCCTTGACTGC
ACCCTCCCTCCCGATCATCCGGATCCCTCTTCTTGATCTTCATTACTAAG
TTCTCTACCCTCTCGGAATCATCGGCATGCTTATCATAATATGGAATGTC
ATTACACTCGCTGCATTCCCTCCACGTCTTGGACATGTCTTTTCCATCCC
GACAGCAGGTAGATGCTGATTTAAAGAGCCATTCTTTTTCTTTCTTGACC
TCTTGCACATAGTACACAGGAAACTTTCCCTCACTCTTCCTCGCCCTTGA
CTGCACCCTCCCTCCCGATCATCCGGATCCCTCTTCTTGATCTTCATTAC
TAAGTTCTCTACCCTCTCGGAATCATCGGCATGCTTATCATAATATGGAA
TGTCATTACACTCGCTGCATTCCCTCCACGTCTTGGACATGTCTTTTCCA
TCCCGACAGCAGGTAGATGCTGATTTAAAGAGCCATTCTTTTTCTTTCTT
GACCTCTTGCACATAGTACACAGGAAACTTTCCCTCACTCTTCCTCGCCC
TTGACTGCACCCTCCCTCCCGATCATCCGGATCCCTCTTCTTGATCTTCA
TTACTAAGTTCTCTACCCTCTCGGAATCATCGGCATGCTTATCATAATAT
GGAATGTCATTACACTCGCTGCATTCCCTCCACGTCTTGGACATGTCTTT
TCCATCCCGACAGCAGGTAGATGCTGATTTAAAGAGCCATTCTTTTTCTT
TCTTGACCTCTTGCACATAGTACACAGGAAACTTTCCCTCACTCTTCCTC
GCCCTTGACTGCACCCTCCCTCCCGATCATCCGGATCCCTCTTCTTGATC
TTCATTACTAAGTTCTCTACCCTCTCGGAATCATCGGCATGCTTATCATA
ATATGGAATGTCATTACACTCGCTGCATTCCCTCCACGTCTTGGACATGT
CTTTTCCATCCCGACAGCAGGTAGATGCTGATTTAAAGAGCCATTCTTTT
TCTTTCTTGACCTCTTGCACATAGTACACAGGAAACTTTCCCTCACTCTT
CCTCGCCCTTGACTGCACCCTCCCTCCCGATCATCCGGATCCCTCTTCTT
GATCTTCATTACTAAGTTCTCTACCCTCTCGGAATCATCGGCATGCTTAT
CATAATATGGAATGTCATTACACTCGCTGCATTCCCTCCACGTCTTGGAC
ATGTCTTTTCCATCCCGACAGCAGGTAGATGCTGATTTAAAGAGCCATTC
TTTTTCTTTCTTGACCTCTTGCACATAGTACACAGGAAACTTTCCCTCAC
TCTTCCTCGCCCTTGACTGCACCCTCCCTCCCGATCATCCGGATCCCTCT
TCTTGATCTTCATTACTAAGTTCTCTACCCTCTCGGAATCATCGGCATGC
TTATCATAATATGGAATGTCATTACACTCGCTGCATTCCCTCCACGTCTT
GGACATGTCTTTTCCATCCCGACAGCAGGTAGATGCTGATTTAAAGAGCC
ATTCTTTTTCTTTCTTGACCTCTTGCACATAGTACACAGGAAACTTTCCC
TCACTCTTCCTCGCCCTTGACTGCACCCTCCCTCCCGATCATCCGGATCC
CTCTTCTTGATCTTCATTACTAAGTTCTCTACCCTCTCGGAATCATCGGC
ATGCTTATCATAATATGGAATGTCATTACACTCGCTGCATTCCCTCCACG
TCTTGGACATGTCTTTTCCATCCCGACAGCAGGTAGATGCTGATTTAAAG
AGCCATTCTTTTTCTTTCTTGACCTCTTGCACATAGTACACAGGAAACTT
TCCCTCACTCTTCCTCGCCCTTGACTGCACCCTCCCTCCCGATCATCCGG
ATCCCTCTTCTTGATCTTCATTACTAAGTTCTCTACCCTCTCGGAATCAT
CGGCATGCTTATCATAATATGGAATGTCATTACACTCGCTGCATTCCCTC
CACGTCTTGGACATGTCTTTTCCATCCCGACAGCAGGTAGATGCTGATTT
AAAGAGCCATTCTTTTTCTTTCTTGACCTCTTGCACATAGTACACAGGAA
ACTTTCCCTCACTCTTCCTCGCCCTTGACTGCACCCTCCCTCCCGATCAT
CCGGATCCCTCTTCTTGATCTTCATTACTAAGTTCTCTACCCTCTCGGAA
TCATCGGCATGCTTATCATAATATGGAATGTCATTACACTCGCTGCATTC
CCTCCACGTCTTGGACATGTCTTTTCCATCCCGACAGCAGGTAGATGCTG
ATTTAAAGAGCCATTCTTTTTCTTTCTTGACCTCTTGCACATAGTACACA
GGAAACTTTCCCTCACTCTTCCTCGCCCTTGACTGCACCCTCCCTCCCGA
TCATCCGGATCCCTCTTCTTGATCTTCATTACTAAGTTCTCTACCCTCTC
GGAATCATCGGCATGCTTATCATAATATGGAATGTCATTACACTCGCTGC
ATTCCCTCCACGTCTTGGACATGTCTTTTCCATCCCGACAGCAG

protein sequence of jgi.p|Nanoce1779_2|674722

>mRNA_10498-protein ID=mRNA_10498-protein|Name=jgi.p|Nanoce1779_2|674722|organism=Nannochloropsis oceanica|type=polypeptide|length=589bp
MWRSKCVVAYAFALHFFAFVLIGKMIHLEEGDFFLPAKFLERTYEPTLAV
GQEKKVIAAYFPQFHEFEENNQFWGKGFTDFSNVAKVHQNRYGQAIIRPA
ERMGFYDLMSSSQRRFQGELARKYNIHGFAIYHYWFGTKAIMEKPLEMML
LDGYPDIPFCLTWANEPWTRQWDEKDGSEILLNQTYDRETWKPHFDWLLP
YLEHTNYLKYKGLPIILIYKADDIPDLEQMISQWKTWARNANLTGLHVIQ
INGVGWNGSSSWELQPGMDSLVEFFPNYISASGSTMNNLVSTQKKADSYF
YGASAAFDNSPRYSDPTAGATIYPFHPSHLYFWLRQNLARTEPGGFVFLN
AWNEWGQGSAIEPSIQWGRRWLEAIQRAVSDEQRGHVSKTTPDGYVSSVP
LEENPGMPVSHKATQDRVCIIVRTYKIHATGIYNIHQMLNTLLALNHKNW
RAFIVNTDVTPFEDLHTILDQYKHKGKIEISPLTATRSFADDPNSAYDMT
DRAIEHHCGSSKEFKWLLVTNGDNWYTPDALDFLPNNVDLVLMNFYSRYS
IMSAIVWTNAPDDQACCERLQNYQCMFSTLSESSACLS*

mRNA from alignment at scaffold_52:92673..98714+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_10498 ID=mRNA_10498|Name=jgi.p|Nanoce1779_2|674722|organism=Nannochloropsis oceanica|type=mRNA|length=6042bp|location=Sequence derived from alignment at scaffold_52:92673..98714+ (Nannochloropsis oceanica)
ATCATCGTGTCAAACAGCTCGATTCGTGTTCGAAATTGGGCGTCCGAGTT
TGGAAATCGAAATATCAAACTAGTTGGAAGGCATATTTTTTGCCGGGCTA
TTGGTATTTGCCTTCATCATGTGGCGGTCGAAATGTGTGGTGGCATATGC
TTTTGCATTACACTTCTTCGCCTTTGTTCTCATTGGAAAAATGATTCATT
TGGAAGAAGGAGATTTTTTTCTACCAGCAAAATTTCTTGAGAGGACTTAT
GAGCCCACTTTGGCGGTGGGACAAGAGAAAAAAGTGATCGCTGCCTACTT
TCCTCAGTTTCATGAATTCGAAGAGAATAACCAATTTTGGGGAAAAGGCT
TCACAGATTTCTCCAATGTCGCAAAGGTTCACCAAAATCGGTACGGTCAG
GCAATTATTAGGCCTGCCGAACGAATGGGCTTCTATGACTTGATGTCATC
CAGCCAAAGGCGTTTCCAGGGGGAGCTAGCAAGGAAGTATAATATTCATG
GATTTGCCATATACCATTACTGGTTCGGCACCAAAGCTATCATGGAAAAG
CCACTGGAAATGATGCTCTTAGACGGCTACCCTGACATTCCTTTCTGTCT
AACTTGGGCAAACGAGCCTTGGACGCGACAGTGGGATGAAAAGGACGGGT
CAGAAATTCTCCTCAATCAGACTTACGACCGAGAAACCTGGAAGCCTCAC
TTTGACTGGCTTTTACCCTATCTAGAGCATACAAATTATTTGAAATACAA
GGGCCTACCAATCATCCTAATTTACAAAGCGGACGATATTCCCGATTTGG
AACAAATGATAAGTCAGTGGAAAACGTGGGCGAGGAATGCAAATTTGACG
GGCCTCCACGTGATACAAATCAATGGTGTAGGCTGGAATGGATCGTCTTC
TTGGGAATTGCAGCCAGGAATGGATTCTCTGGTCGAATTCTTCCCAAATT
ACATTTCGGCGTCCGGCTCTACTATGAACAACCTTGTGAGCACCCAAAAA
AAGGCAGACAGTTACTTCTACGGCGCTTCCGCTGCCTTTGACAATTCTCC
TAGATACTCCGACCCTACCGCTGGTGCTACGATCTATCCATTTCATCCGT
CACATTTGTATTTCTGGCTCCGTCAAAATCTGGCCAGGACGGAGCCTGGT
GGATTTGTGTTTTTAAATGCATGGAATGAGTGGGGACAGGGGTCTGCCAT
TGAGCCAAGCATCCAATGGGGTAGGCGATGGCTTGAAGCCATCCAAAGAG
CTGTCTCCGATGAACAGCGAGGCCATGTATCAAAAACCACGCCTGACGGT
TATGTGAGCTCTGTGCCTTTGGAGGAGAACCCTGGTATGCCTGTAAGCCA
TAAGGCGACACAAGATAGAGTGTGTATTATCGTCCGCACCTATAAGATCC
ATGCAACAGGCATCTACAACATCCATCAAATGCTCAACACTTTGCTTGCT
TTGAACCACAAAAACTGGAGAGCTTTCATCGTCAATACAGATGTAACTCC
ATTTGAGGATCTGCACACTATCCTTGACCAATATAAACATAAAGGAAAGA
TTGAAATTTCTCCCCTAACTGCCACTAGGAGCTTTGCAGATGACCCTAAT
TCGGCCTATGATATGACAGATAGAGCCATAGAGCACCACTGTGGTTCTAG
CAAGGAGTTCAAATGGCTACTAGTCACTAACGGAGACAATTGGTACACTC
CCGATGCTTTGGATTTCCTTCCTAATAATGTCGATCTTGTCTTAATGAAT
TTTTATTCACGATACTCGATCATGAGTGCAATTGTGTGGACAAATGCCCC
GGACGATCAGGCGTGCTGCGAAAGGCTTCAAAACTATCAATGCATGGTAG
CCGATCTCAAAATGGGCCACATTGATCTTGGCGCAGTGATATTTAATTAT
CAGAAATATCATAAAGAGCACATCTCTTTTTCAACATTTAATGAACAGTC
CGATACTCAATGTGGTGTGAAAAATGGCGGCTGCCACGATGGCCTCCTGC
TCGAGTATTTGAAACAAAATAAATGGTCCTATAGTGGTCTTCCTGTTGAT
GTATGCACCATGTATCACAATTCAAACCCCAAAAGCTGTGAGCTTGTTGG
TGGGACATGGTTCGACACAATGGATCTGAGTGAAATGGGCTGTTACTATG
GGAACATACTACCCGTGCCGCTGGAATCCGTGAACTATCAGGCATATATG
GTAGCTCATGCAGCGTGCGTGTGTTAATTTCACTCTACCTGGGTCCCTGG
AAATCGTGGATTATCAGGCATCAATGGTGGTATCCTATAAAGCTTCGTAT
GGTGATCTATATTTACAAACTACAGGGGTTATGTAAAGTTTAAGCAAATA
TTAGGGTACCTCACCTCGTTTGATACGCCTCATTCCTTGTTTTTCCAGTT
AAAGTATTTCTTTTCGCATAGCTGACAGGACTTCTTCAGTCCCTCTCTCA
TTCCTCTTGTTTACAACCCCGACACATAATCGTTTCTCTTGTCGTCCTGT
TCTTCCACTATTTGTCGTGTTTTACACCCTGGCTCCTCCACGGACTATTC
ACGCGAAAGTTTCTTTATCTCCGACAAAAATGGCGACAAATACTTTATAT
TGCCTCCATGCGGACCAATTAAAACGCAGCACTCATATATGTTCTGTTCC
TTTTTCCACATGGGATTGTTGTGAGTTGGGCCAGGAGTTAAATTGACATG
GCTAAACCCTTCGTCCATTGGAAGCCAAACTTTGAGGCTTGATAATTTGG
AATGATTCCCTAACCACCTGCTATGCCCGTTCTTTCTCTCTAGTAAAGAG
GGGTTGAAACTCTTACCCAGAGCGCTCCTATAAATTTTTCTCAGATGTTC
CGTTCGCCATCCCATTGGCATACATATGTTAACAAGGAAAAAACAATAAG
AAAAAGTTATCTCATGTTGGGTTTTTTCCGATTTGGTAACCTCCCTACCC
TCCTCGAGCTCGAAACAAAAATGACCAAAAAGACGCCAAGAACGTATAAA
TCATTGCTTCATTCTCCCTGAACAAGTTTATTTACATATACTCTATAAAT
GGTGCCGCTGCTGTCTTCCCCTCCTCAGTCAATATGCAGAGTTCCTGGCC
CTGATCATCCGGATCCCTCTTCTTGATCTTCATTACTAAGTTCTCTACCC
TCTCGGAATCATCGGCATGCTTATCATAATATGGAATGTCATTACACTCG
CTGCATTCCCTCCACGTCTTGGACATGTCTTTTCCATCCCGACAGCAGGT
AGATGCTGATTTAAAGAGCCATTCTTTTTCTTTCTTGACCTCTTGCACAT
AGTACACAGGAAACTTTCCCTCACTCTTCCTCGCCCTTGACTGCACCCTC
CCTCCCGATCATCCGGATCCCTCTTCTTGATCTTCATTACTAAGTTCTCT
ACCCTCTCGGAATCATCGGCATGCTTATCATAATATGGAATGTCATTACA
CTCGCTGCATTCCCTCCACGTCTTGGACATGTCTTTTCCATCCCGACAGC
AGGTAGATGCTGATTTAAAGAGCCATTCTTTTTCTTTCTTGACCTCTTGC
ACATAGTACACAGGAAACTTTCCCTCACTCTTCCTCGCCCTTGACTGCAC
CCTCCCTCCCGATCATCCGGATCCCTCTTCTTGATCTTCATTACTAAGTT
CTCTACCCTCTCGGAATCATCGGCATGCTTATCATAATATGGAATGTCAT
TACACTCGCTGCATTCCCTCCACGTCTTGGACATGTCTTTTCCATCCCGA
CAGCAGGTAGATGCTGATTTAAAGAGCCATTCTTTTTCTTTCTTGACCTC
TTGCACATAGTACACAGGAAACTTTCCCTCACTCTTCCTCGCCCTTGACT
GCACCCTCCCTCCCGATCATCCGGATCCCTCTTCTTGATCTTCATTACTA
AGTTCTCTACCCTCTCGGAATCATCGGCATGCTTATCATAATATGGAATG
TCATTACACTCGCTGCATTCCCTCCACGTCTTGGACATGTCTTTTCCATC
CCGACAGCAGGTAGATGCTGATTTAAAGAGCCATTCTTTTTCTTTCTTGA
CCTCTTGCACATAGTACACAGGAAACTTTCCCTCACTCTTCCTCGCCCTT
GACTGCACCCTCCCTCCCGATCATCCGGATCCCTCTTCTTGATCTTCATT
ACTAAGTTCTCTACCCTCTCGGAATCATCGGCATGCTTATCATAATATGG
AATGTCATTACACTCGCTGCATTCCCTCCACGTCTTGGACATGTCTTTTC
CATCCCGACAGCAGGTAGATGCTGATTTAAAGAGCCATTCTTTTTCTTTC
TTGACCTCTTGCACATAGTACACAGGAAACTTTCCCTCACTCTTCCTCGC
CCTTGACTGCACCCTCCCTCCCGATCATCCGGATCCCTCTTCTTGATCTT
CATTACTAAGTTCTCTACCCTCTCGGAATCATCGGCATGCTTATCATAAT
ATGGAATGTCATTACACTCGCTGCATTCCCTCCACGTCTTGGACATGTCT
TTTCCATCCCGACAGCAGGTAGATGCTGATTTAAAGAGCCATTCTTTTTC
TTTCTTGACCTCTTGCACATAGTACACAGGAAACTTTCCCTCACTCTTCC
TCGCCCTTGACTGCACCCTCCCTCCCGATCATCCGGATCCCTCTTCTTGA
TCTTCATTACTAAGTTCTCTACCCTCTCGGAATCATCGGCATGCTTATCA
TAATATGGAATGTCATTACACTCGCTGCATTCCCTCCACGTCTTGGACAT
GTCTTTTCCATCCCGACAGCAGGTAGATGCTGATTTAAAGAGCCATTCTT
TTTCTTTCTTGACCTCTTGCACATAGTACACAGGAAACTTTCCCTCACTC
TTCCTCGCCCTTGACTGCACCCTCCCTCCCGATCATCCGGATCCCTCTTC
TTGATCTTCATTACTAAGTTCTCTACCCTCTCGGAATCATCGGCATGCTT
ATCATAATATGGAATGTCATTACACTCGCTGCATTCCCTCCACGTCTTGG
ACATGTCTTTTCCATCCCGACAGCAGGTAGATGCTGATTTAAAGAGCCAT
TCTTTTTCTTTCTTGACCTCTTGCACATAGTACACAGGAAACTTTCCCTC
ACTCTTCCTCGCCCTTGACTGCACCCTCCCTCCCGATCATCCGGATCCCT
CTTCTTGATCTTCATTACTAAGTTCTCTACCCTCTCGGAATCATCGGCAT
GCTTATCATAATATGGAATGTCATTACACTCGCTGCATTCCCTCCACGTC
TTGGACATGTCTTTTCCATCCCGACAGCAGGTAGATGCTGATTTAAAGAG
CCATTCTTTTTCTTTCTTGACCTCTTGCACATAGTACACAGGAAACTTTC
CCTCACTCTTCCTCGCCCTTGACTGCACCCTCCCTCCCGATCATCCGGAT
CCCTCTTCTTGATCTTCATTACTAAGTTCTCTACCCTCTCGGAATCATCG
GCATGCTTATCATAATATGGAATGTCATTACACTCGCTGCATTCCCTCCA
CGTCTTGGACATGTCTTTTCCATCCCGACAGCAGGTAGATGCTGATTTAA
AGAGCCATTCTTTTTCTTTCTTGACCTCTTGCACATAGTACACAGGAAAC
TTTCCCTCACTCTTCCTCGCCCTTGACTGCACCCTCCCTCCCGATCATCC
GGATCCCTCTTCTTGATCTTCATTACTAAGTTCTCTACCCTCTCGGAATC
ATCGGCATGCTTATCATAATATGGAATGTCATTACACTCGCTGCATTCCC
TCCACGTCTTGGACATGTCTTTTCCATCCCGACAGCAGGTAGATGCTGAT
TTAAAGAGCCATTCTTTTTCTTTCTTGACCTCTTGCACATAGTACACAGG
AAACTTTCCCTCACTCTTCCTCGCCCTTGACTGCACCCTCCCTCCCGATC
ATCCGGATCCCTCTTCTTGATCTTCATTACTAAGTTCTCTACCCTCTCGG
AATCATCGGCATGCTTATCATAATATGGAATGTCATTACACTCGCTGCAT
TCCCTCCACGTCTTGGACATGTCTTTTCCATCCCGACAGCAG

Coding sequence (CDS) from alignment at scaffold_52:92673..98714+

>mRNA_10498 ID=mRNA_10498|Name=jgi.p|Nanoce1779_2|674722|organism=Nannochloropsis oceanica|type=CDS|length=3534bp|location=Sequence derived from alignment at scaffold_52:92673..98714+ (Nannochloropsis oceanica)
ATGTGGCGGTCGAAATGTGTGGTGGCATATGCTTTTGCATTACACTTCTT
CGCCTTTGTTCTCATTGGAAAAATGATTCATTTGGAAGAAGGAGATTTTT
TTCTACCAGCAAAATTTCTTGAGAGGACTTATGAGCCCACTTTGGCGGTG
GGACAAGAGAAAAAAGTGATCGCTGCCTACTTTCCTCAGTTTCATGAATT
CGAAGAGAATAACCAATTTTGGGGAAAAGGCTTCACAGATTTCTCCAATG
TCGCAAAGGTTCACCAAAATCGGTACGGTCAGGCAATTATTAGGCCTGCC
GAACGAATGGGCTTCTATGACTTGATGTCATCCAGCCAAAGGCGTTTCCA
GGGGGAGCTAGCAAGGAAGTATAATATTCATGGATTTGCCATATACCATT
ACTGGTTCGGCACCAAAGCTATCATGGAAAAGCCACTGGAAATGATGCTC
TTAGACGGCTACCCTGACATTCCTTTCTGTCTAACTTGGGCAAACGAGCC
TTGGACGCGACAGTGGGATGAAAAGGACGGGTCAGAAATTCTCCTCAATC
AGACTTACGACCGAGAAACCTGGAAGCCTCACTTTGACTGGCTTTTACCC
TATCTAGAGCATACAAATTATTTGAAATACAAGGGCCTACCAATCATCCT
AATTTACAAAGCGGACGATATTCCCGATTTGGAACAAATGATAAGTCAGT
GGAAAACGTGGGCGAGGAATGCAAATTTGACGGGCCTCCACGTGATACAA
ATCAATGGTGTAGGCTGGAATGGATCGTCTTCTTGGGAATTGCAGCCAGG
AATGGATTCTCTGGTCGAATTCTTCCCAAATTACATTTCGGCGTCCGGCT
CTACTATGAACAACCTTGTGAGCACCCAAAAAAAGGCAGACAGTTACTTC
TACGGCGCTTCCGCTGCCTTTGACAATTCTCCTAGATACTCCGACCCTAC
CGCTGGTGCTACGATCTATCCATTTCATCCGTCACATTTGTATTTCTGGC
TCCGTCAAAATCTGGCCAGGACGGAGCCTGGTGGATTTGTGTTTTTAAAT
GCATGGAATGAGTGGGGACAGGGGTCTGCCATTGAGCCAAGCATCCAATG
GGGTAGGCGATGGCTTGAAGCCATCCAAAGAGCTGTCTCCGATGAACAGC
GAGGCCATGTATCAAAAACCACGCCTGACGGTTATGTGAGCTCTGTGCCT
TTGGAGGAGAACCCTGGTATGCCTGTAAGCCATAAGGCGACACAAGATAG
AGTGTGTATTATCGTCCGCACCTATAAGATCCATGCAACAGGCATCTACA
ACATCCATCAAATGCTCAACACTTTGCTTGCTTTGAACCACAAAAACTGG
AGAGCTTTCATCGTCAATACAGATGTAACTCCATTTGAGGATCTGCACAC
TATCCTTGACCAATATAAACATAAAGGAAAGATTGAAATTTCTCCCCTAA
CTGCCACTAGGAGCTTTGCAGATGACCCTAATTCGGCCTATGATATGACA
GATAGAGCCATAGAGCACCACTGTGGTTCTAGCAAGGAGTTCAAATGGCT
ACTAGTCACTAACGGAGACAATTGGTACACTCCCGATGCTTTGGATTTCC
TTCCTAATAATGTCGATCTTGTCTTAATGAATTTTTATTCACGATACTCG
ATCATGAGTGCAATTGTGTGGACAAATGCCCCGGACGATCAGGCGTGCTG
CGAAAGGCTTCAAAACTATCAATGCATGTTCTCTACCCTCTCGGAATCAT
CGGCATGCTTATCATAAATGTGGCGGTCGAAATGTGTGGTGGCATATGCT
TTTGCATTACACTTCTTCGCCTTTGTTCTCATTGGAAAAATGATTCATTT
GGAAGAAGGAGATTTTTTTCTACCAGCAAAATTTCTTGAGAGGACTTATG
AGCCCACTTTGGCGGTGGGACAAGAGAAAAAAGTGATCGCTGCCTACTTT
CCTCAGTTTCATGAATTCGAAGAGAATAACCAATTTTGGGGAAAAGGCTT
CACAGATTTCTCCAATGTCGCAAAGGTTCACCAAAATCGGTACGGTCAGG
CAATTATTAGGCCTGCCGAACGAATGGGCTTCTATGACTTGATGTCATCC
AGCCAAAGGCGTTTCCAGGGGGAGCTAGCAAGGAAGTATAATATTCATGG
ATTTGCCATATACCATTACTGGTTCGGCACCAAAGCTATCATGGAAAAGC
CACTGGAAATGATGCTCTTAGACGGCTACCCTGACATTCCTTTCTGTCTA
ACTTGGGCAAACGAGCCTTGGACGCGACAGTGGGATGAAAAGGACGGGTC
AGAAATTCTCCTCAATCAGACTTACGACCGAGAAACCTGGAAGCCTCACT
TTGACTGGCTTTTACCCTATCTAGAGCATACAAATTATTTGAAATACAAG
GGCCTACCAATCATCCTAATTTACAAAGCGGACGATATTCCCGATTTGGA
ACAAATGATAAGTCAGTGGAAAACGTGGGCGAGGAATGCAAATTTGACGG
GCCTCCACGTGATACAAATCAATGGTGTAGGCTGGAATGGATCGTCTTCT
TGGGAATTGCAGCCAGGAATGGATTCTCTGGTCGAATTCTTCCCAAATTA
CATTTCGGCGTCCGGCTCTACTATGAACAACCTTGTGAGCACCCAAAAAA
AGGCAGACAGTTACTTCTACGGCGCTTCCGCTGCCTTTGACAATTCTCCT
AGATACTCCGACCCTACCGCTGGTGCTACGATCTATCCATTTCATCCGTC
ACATTTGTATTTCTGGCTCCGTCAAAATCTGGCCAGGACGGAGCCTGGTG
GATTTGTGTTTTTAAATGCATGGAATGAGTGGGGACAGGGGTCTGCCATT
GAGCCAAGCATCCAATGGGGTAGGCGATGGCTTGAAGCCATCCAAAGAGC
TGTCTCCGATGAACAGCGAGGCCATGTATCAAAAACCACGCCTGACGGTT
ATGTGAGCTCTGTGCCTTTGGAGGAGAACCCTGGTATGCCTGTAAGCCAT
AAGGCGACACAAGATAGAGTGTGTATTATCGTCCGCACCTATAAGATCCA
TGCAACAGGCATCTACAACATCCATCAAATGCTCAACACTTTGCTTGCTT
TGAACCACAAAAACTGGAGAGCTTTCATCGTCAATACAGATGTAACTCCA
TTTGAGGATCTGCACACTATCCTTGACCAATATAAACATAAAGGAAAGAT
TGAAATTTCTCCCCTAACTGCCACTAGGAGCTTTGCAGATGACCCTAATT
CGGCCTATGATATGACAGATAGAGCCATAGAGCACCACTGTGGTTCTAGC
AAGGAGTTCAAATGGCTACTAGTCACTAACGGAGACAATTGGTACACTCC
CGATGCTTTGGATTTCCTTCCTAATAATGTCGATCTTGTCTTAATGAATT
TTTATTCACGATACTCGATCATGAGTGCAATTGTGTGGACAAATGCCCCG
GACGATCAGGCGTGCTGCGAAAGGCTTCAAAACTATCAATGCATGTTCTC
TACCCTCTCGGAATCATCGGCATGCTTATCATAA

Synonyms

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