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Properties
| Property Name | Value |
|---|
| TranscriptId | 612183 |
| Track | FilteredModels2 |
| ProteinId | 612097 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_61 | supercontig | scaffold_61:74319..76546 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10664 ID=mRNA_10664|Name=jgi.p|Nanoce1779_2|612097|organism=Nannochloropsis oceanica|type=mRNA|length=931bp
ACAGGCCTCGACAAGCCGGACCCAAGACCATGGAAGTCGATGCGCCCGAA
TCTCCGCCACCGGATGCCGCTGCTGTGCCTACTACTACCACTACTTCGTC
CAAACCTTTGACCGAGCAACTGGCCAATGCCCTTTCCCAGCACGATTATT
CCCTGGCTTTGCGCGTGGCCAACGAGCTAGAGATTGGCATTCAGACGAAC
CAGTTTGACACAGCTTACGGCAACCCCCAACTCCTTTTGGCGGCCCAGAT
CCTTCTTCTTCTCATTCTTAACGACCTCGACAACGCCCGACATCTGTGGC
GGCGCATCGACAGCACCCTCAGAGACGCGCCCACGGCCGAGGCTGAACAG
TTACAGCAAGCCTGGACCGTGGGAAAGTTGTTGTGGGAGCGTGAGATTCC
TTCTGCCTATGCGGCCATGACAGGCGGGCAGTGGGCGCCGGAGCTCGCCC
CCTTGGTGGAGGCCCTACGGGGCCGCGTCCGCCGGGACGAATTCACTCTT
TTGGCCCGAGCCTACAAGCGCCTTAAGCTTACCACTCTGGCCGTCAAGCT
GGGCACTACTCAAGCCGATGCTGTGGCCGCGGCCAGGGAGGCAGGCTGGC
ATGTGGACGAGAACAAGAACGAAGTCCTACCTCTCCCGGCCCCACCGGCC
CAAGGGGAGCCCCTGGGCCTCCCTCAATTGGATCAGCTGGCCAAGTACAT
CTCCTTCCTAGAAGCCAAGGACGTCACTTCCTCTGTGGCTTAGGCCCGAG
GGACGGAGGTGGCTTTAGGGAGGGGCGCGTGGGTGTTGATAGACAGAAAG
CGTTGATAGGGAGAGGAGGTAGAGGACGAAGGGGAAAAGAAAGCGAAAGA
AGAAGAGGAAGCAACTGAGGGAAAAGAAGAAGACGCCATATCTGAATAGA
ATACGAAAAGAAGTCAAGACTCACAGCTGTA back to topprotein sequence of jgi.p|Nanoce1779_2|612097 >mRNA_10664-protein ID=mRNA_10664-protein|Name=jgi.p|Nanoce1779_2|612097|organism=Nannochloropsis oceanica|type=polypeptide|length=238bp
MEVDAPESPPPDAAAVPTTTTTSSKPLTEQLANALSQHDYSLALRVANEL
EIGIQTNQFDTAYGNPQLLLAAQILLLLILNDLDNARHLWRRIDSTLRDA
PTAEAEQLQQAWTVGKLLWEREIPSAYAAMTGGQWAPELAPLVEALRGRV
RRDEFTLLARAYKRLKLTTLAVKLGTTQADAVAAAREAGWHVDENKNEVL
PLPAPPAQGEPLGLPQLDQLAKYISFLEAKDVTSSVA* back to topmRNA from alignment at scaffold_61:74319..76546- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10664 ID=mRNA_10664|Name=jgi.p|Nanoce1779_2|612097|organism=Nannochloropsis oceanica|type=mRNA|length=2228bp|location=Sequence derived from alignment at scaffold_61:74319..76546- (Nannochloropsis oceanica)
ACAGGCCTCGACAAGCCGGACCCAAGACCATGGAAGTCGATGCGCCCGAA
TCTCCGCCACCGGATGCCGCTGCTGTGCCTACTACTACCACTACTTCGTC
CAAACCTTTGACCGAGCAACTGGCCAATGCCCTTTCCCAGCACGATTATT
CCCTGGCTTTGCGCGTGGCCAACGAGCTAGAGATTGGCATTCAGGTATGC
AAAGGAAACTGAGAACAAGAGCGAAGAAAGGTCTACGGTGGTGAAGCAAG
AGAGGCTGTCTGTCCCTGCGTGTAGTTTACGAAGAGCTAGCCCCTGACCC
CCCGACCCCCCCCTCCCGCCTCTTACACATAGACGAACCAGTTTGACACA
GCTTACGGCAACCCCCAACTCCTTTTGGCGGCCCAGATCCTTCTTCTTCT
CATTCTTAACGACCTGTACGTATCAACGCTCTGCTTGGCTATCGTCCCCA
TCCCCTCCTCCTTTTGACTTCCCACCATGGTGCCCCTCCCATGTTTTGGA
AACCCACGCAATAGTACTATGCCGCCTCGCAATGAAAATCGCGATCATGC
AACACTCTGTACTAATATCCCCTTAATGCATCGTTTTTTTACACCCCGAC
CTACTGTCCCAATCATTTGCCCCCCCCCCGCTCCCTCCCTTCCGTCCCCC
CTCTCTCCCACCAGCGACAACGCCCGACATCTGTGGCGGCGCATCGACAG
CACCCTCAGAGACGCGCCCACGGCCGAGGCTGAACAGTTACAGCAAGCCT
GGACCGTGGGAAAGTTGTTGTGGGAGCGGTGAGAACGGAGGAGAGGAGGG
AGAGGGGGAGAAAGGGAAGGAGGGAGTAAGGGGAGGAGGGAGGTGTTCCT
CCTTCATGCAGCCGAGTCACTCACCTCGATGTTTCTTGTCTTCTCCTCCT
TCCAGTGAGATTCCTTCTGCCTATGCGGCCATGACAGGCGGGCAGTGGGC
GCCGGAGCTCGCCCCCTTGGTGGAGGCCCTACGGGGTGAGGAGGGAGAGG
GGGGAGGAGGGAGTGAGGGAGAAAGAGAGTGCAGGGTGGTATGAGGGTCG
TATTATAATGTAATATTATATCATTATATAGTAATATGTATAACAACTAT
ATTATTATTATTATTATTACTATTACTACTATTATTATTATTATTATTAT
TATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA
TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT
ATTATTATTATTATTATTATTATTATTATTATTATTATCATTATTATTAT
TATTATTATTTATTATTATTATATTGAGCATACGCTTCATCGGCTTTGTT
GATGGTCAGCTTTTGCTCCTTTTCTCGTGCCTCACCACACGCACCTCTCT
CCCACCCCCTTCCTCGCTCCCTCCCTCCTTTCCCCGACCAGGCCGCGTCC
GCCGGGACGAATTCACTCTTTTGGCCCGAGCCTACAAGCGCCTTAAGCTT
ACCACTCTGGCCGTCAAGCTGGGCACTACTCAAGCCGATGCTGTGGCCGG
TGCGAACGTCTCTCTCTCCCACCCTCTCCCTCCCTCCTCCCCTCCCTCCC
TCCCCCCTCCCTCCCTAGCTGCCCGTCAGCTCACCGTAGATGGTCGAAAC
GGAACGACTCGACACGATCCGCACAGCACTCTCTCACCCCTCCCTCCCTC
CCTCCTTATTTCCAGCGGCCAGGGAGGCAGGCTGGCATGTGGACGAGAAC
AAGAACGAAGTCCTACCTCTCCCGGCCCCACCGGCCCAAGGGGAGCCCCT
GGGTGAGGAGGAGGAAGGGAGGGAGGGACAGGGGGAAGGGAAGGTGGGCG
TGTCCGTCTGACTAAATCGCTCTTGTCGCATGCCTCGTGCCATATCTCAC
GATTGGATTCGATACCTTTCTCTTCTTCCGTCCCTCCCTCCCTCCCTTCC
TCCTCCCCTGCAGGCCTCCCTCAATTGGATCAGCTGGCCAAGTACATCTC
CTTCCTAGAAGCCAAGGACGTCACTTCCTCTGTGGCTTAGGCCCGAGGGA
CGGAGGTGGCTTTAGGGAGGGGCGCGTGGGTGTTGATAGACAGAAAGCGT
TGATAGGGAGAGGAGGTAGAGGACGAAGGGGAAAAGAAAGCGAAAGAAGA
AGAGGAAGCAACTGAGGGAAAAGAAGAAGACGCCATATCTGAATAGAATA
CGAAAAGAAGTCAAGACTCACAGCTGTA back to topCoding sequence (CDS) from alignment at scaffold_61:74319..76546- >mRNA_10664 ID=mRNA_10664|Name=jgi.p|Nanoce1779_2|612097|organism=Nannochloropsis oceanica|type=CDS|length=4998bp|location=Sequence derived from alignment at scaffold_61:74319..76546- (Nannochloropsis oceanica)
GCCTCCCTCAATTGGATCAGCTGGCCAAGTACATCTCCTTCCTAGAAGCC
AAGGACGTCACTTCCTCTGTGGCTTAGCGGCCAGGGAGGCAGGCTGGCAT
GTGGACGAGAACAAGAACGAAGTCCTACCTCTCCCGGCCCCACCGGCCCA
AGGGGAGCCCCTGGGCCGCGTCCGCCGGGACGAATTCACTCTTTTGGCCC
GAGCCTACAAGCGCCTTAAGCTTACCACTCTGGCCGTCAAGCTGGGCACT
ACTCAAGCCGATGCTGTGGCCGTGAGATTCCTTCTGCCTATGCGGCCATG
ACAGGCGGGCAGTGGGCGCCGGAGCTCGCCCCCTTGGTGGAGGCCCTACG
GGCGACAACGCCCGACATCTGTGGCGGCGCATCGACAGCACCCTCAGAGA
CGCGCCCACGGCCGAGGCTGAACAGTTACAGCAAGCCTGGACCGTGGGAA
AGTTGTTGTGGGAGCGACGAACCAGTTTGACACAGCTTACGGCAACCCCC
AACTCCTTTTGGCGGCCCAGATCCTTCTTCTTCTCATTCTTAACGACCTA
TGGAAGTCGATGCGCCCGAATCTCCGCCACCGGATGCCGCTGCTGTGCCT
ACTACTACCACTACTTCGTCCAAACCTTTGACCGAGCAACTGGCCAATGC
CCTTTCCCAGCACGATTATTCCCTGGCTTTGCGCGTGGCCAACGAGCTAG
AGATTGGCATTCAGGCCTCCCTCAATTGGATCAGCTGGCCAAGTACATCT
CCTTCCTAGAAGCCAAGGACGTCACTTCCTCTGTGGCTTAGCGGCCAGGG
AGGCAGGCTGGCATGTGGACGAGAACAAGAACGAAGTCCTACCTCTCCCG
GCCCCACCGGCCCAAGGGGAGCCCCTGGGCCGCGTCCGCCGGGACGAATT
CACTCTTTTGGCCCGAGCCTACAAGCGCCTTAAGCTTACCACTCTGGCCG
TCAAGCTGGGCACTACTCAAGCCGATGCTGTGGCCGTGAGATTCCTTCTG
CCTATGCGGCCATGACAGGCGGGCAGTGGGCGCCGGAGCTCGCCCCCTTG
GTGGAGGCCCTACGGGCGACAACGCCCGACATCTGTGGCGGCGCATCGAC
AGCACCCTCAGAGACGCGCCCACGGCCGAGGCTGAACAGTTACAGCAAGC
CTGGACCGTGGGAAAGTTGTTGTGGGAGCGACGAACCAGTTTGACACAGC
TTACGGCAACCCCCAACTCCTTTTGGCGGCCCAGATCCTTCTTCTTCTCA
TTCTTAACGACCTATGGAAGTCGATGCGCCCGAATCTCCGCCACCGGATG
CCGCTGCTGTGCCTACTACTACCACTACTTCGTCCAAACCTTTGACCGAG
CAACTGGCCAATGCCCTTTCCCAGCACGATTATTCCCTGGCTTTGCGCGT
GGCCAACGAGCTAGAGATTGGCATTCAGGCCTCCCTCAATTGGATCAGCT
GGCCAAGTACATCTCCTTCCTAGAAGCCAAGGACGTCACTTCCTCTGTGG
CTTAGCGGCCAGGGAGGCAGGCTGGCATGTGGACGAGAACAAGAACGAAG
TCCTACCTCTCCCGGCCCCACCGGCCCAAGGGGAGCCCCTGGGCCGCGTC
CGCCGGGACGAATTCACTCTTTTGGCCCGAGCCTACAAGCGCCTTAAGCT
TACCACTCTGGCCGTCAAGCTGGGCACTACTCAAGCCGATGCTGTGGCCG
TGAGATTCCTTCTGCCTATGCGGCCATGACAGGCGGGCAGTGGGCGCCGG
AGCTCGCCCCCTTGGTGGAGGCCCTACGGGCGACAACGCCCGACATCTGT
GGCGGCGCATCGACAGCACCCTCAGAGACGCGCCCACGGCCGAGGCTGAA
CAGTTACAGCAAGCCTGGACCGTGGGAAAGTTGTTGTGGGAGCGACGAAC
CAGTTTGACACAGCTTACGGCAACCCCCAACTCCTTTTGGCGGCCCAGAT
CCTTCTTCTTCTCATTCTTAACGACCTATGGAAGTCGATGCGCCCGAATC
TCCGCCACCGGATGCCGCTGCTGTGCCTACTACTACCACTACTTCGTCCA
AACCTTTGACCGAGCAACTGGCCAATGCCCTTTCCCAGCACGATTATTCC
CTGGCTTTGCGCGTGGCCAACGAGCTAGAGATTGGCATTCAGGCCTCCCT
CAATTGGATCAGCTGGCCAAGTACATCTCCTTCCTAGAAGCCAAGGACGT
CACTTCCTCTGTGGCTTAGCGGCCAGGGAGGCAGGCTGGCATGTGGACGA
GAACAAGAACGAAGTCCTACCTCTCCCGGCCCCACCGGCCCAAGGGGAGC
CCCTGGGCCGCGTCCGCCGGGACGAATTCACTCTTTTGGCCCGAGCCTAC
AAGCGCCTTAAGCTTACCACTCTGGCCGTCAAGCTGGGCACTACTCAAGC
CGATGCTGTGGCCGTGAGATTCCTTCTGCCTATGCGGCCATGACAGGCGG
GCAGTGGGCGCCGGAGCTCGCCCCCTTGGTGGAGGCCCTACGGGCGACAA
CGCCCGACATCTGTGGCGGCGCATCGACAGCACCCTCAGAGACGCGCCCA
CGGCCGAGGCTGAACAGTTACAGCAAGCCTGGACCGTGGGAAAGTTGTTG
TGGGAGCGACGAACCAGTTTGACACAGCTTACGGCAACCCCCAACTCCTT
TTGGCGGCCCAGATCCTTCTTCTTCTCATTCTTAACGACCTATGGAAGTC
GATGCGCCCGAATCTCCGCCACCGGATGCCGCTGCTGTGCCTACTACTAC
CACTACTTCGTCCAAACCTTTGACCGAGCAACTGGCCAATGCCCTTTCCC
AGCACGATTATTCCCTGGCTTTGCGCGTGGCCAACGAGCTAGAGATTGGC
ATTCAGGCCTCCCTCAATTGGATCAGCTGGCCAAGTACATCTCCTTCCTA
GAAGCCAAGGACGTCACTTCCTCTGTGGCTTAGCGGCCAGGGAGGCAGGC
TGGCATGTGGACGAGAACAAGAACGAAGTCCTACCTCTCCCGGCCCCACC
GGCCCAAGGGGAGCCCCTGGGCCGCGTCCGCCGGGACGAATTCACTCTTT
TGGCCCGAGCCTACAAGCGCCTTAAGCTTACCACTCTGGCCGTCAAGCTG
GGCACTACTCAAGCCGATGCTGTGGCCGTGAGATTCCTTCTGCCTATGCG
GCCATGACAGGCGGGCAGTGGGCGCCGGAGCTCGCCCCCTTGGTGGAGGC
CCTACGGGCGACAACGCCCGACATCTGTGGCGGCGCATCGACAGCACCCT
CAGAGACGCGCCCACGGCCGAGGCTGAACAGTTACAGCAAGCCTGGACCG
TGGGAAAGTTGTTGTGGGAGCGACGAACCAGTTTGACACAGCTTACGGCA
ACCCCCAACTCCTTTTGGCGGCCCAGATCCTTCTTCTTCTCATTCTTAAC
GACCTATGGAAGTCGATGCGCCCGAATCTCCGCCACCGGATGCCGCTGCT
GTGCCTACTACTACCACTACTTCGTCCAAACCTTTGACCGAGCAACTGGC
CAATGCCCTTTCCCAGCACGATTATTCCCTGGCTTTGCGCGTGGCCAACG
AGCTAGAGATTGGCATTCAGGCCTCCCTCAATTGGATCAGCTGGCCAAGT
ACATCTCCTTCCTAGAAGCCAAGGACGTCACTTCCTCTGTGGCTTAGCGG
CCAGGGAGGCAGGCTGGCATGTGGACGAGAACAAGAACGAAGTCCTACCT
CTCCCGGCCCCACCGGCCCAAGGGGAGCCCCTGGGCCGCGTCCGCCGGGA
CGAATTCACTCTTTTGGCCCGAGCCTACAAGCGCCTTAAGCTTACCACTC
TGGCCGTCAAGCTGGGCACTACTCAAGCCGATGCTGTGGCCGTGAGATTC
CTTCTGCCTATGCGGCCATGACAGGCGGGCAGTGGGCGCCGGAGCTCGCC
CCCTTGGTGGAGGCCCTACGGGCGACAACGCCCGACATCTGTGGCGGCGC
ATCGACAGCACCCTCAGAGACGCGCCCACGGCCGAGGCTGAACAGTTACA
GCAAGCCTGGACCGTGGGAAAGTTGTTGTGGGAGCGACGAACCAGTTTGA
CACAGCTTACGGCAACCCCCAACTCCTTTTGGCGGCCCAGATCCTTCTTC
TTCTCATTCTTAACGACCTATGGAAGTCGATGCGCCCGAATCTCCGCCAC
CGGATGCCGCTGCTGTGCCTACTACTACCACTACTTCGTCCAAACCTTTG
ACCGAGCAACTGGCCAATGCCCTTTCCCAGCACGATTATTCCCTGGCTTT
GCGCGTGGCCAACGAGCTAGAGATTGGCATTCAGGCCTCCCTCAATTGGA
TCAGCTGGCCAAGTACATCTCCTTCCTAGAAGCCAAGGACGTCACTTCCT
CTGTGGCTTAGCGGCCAGGGAGGCAGGCTGGCATGTGGACGAGAACAAGA
ACGAAGTCCTACCTCTCCCGGCCCCACCGGCCCAAGGGGAGCCCCTGGGC
CGCGTCCGCCGGGACGAATTCACTCTTTTGGCCCGAGCCTACAAGCGCCT
TAAGCTTACCACTCTGGCCGTCAAGCTGGGCACTACTCAAGCCGATGCTG
TGGCCGTGAGATTCCTTCTGCCTATGCGGCCATGACAGGCGGGCAGTGGG
CGCCGGAGCTCGCCCCCTTGGTGGAGGCCCTACGGGCGACAACGCCCGAC
ATCTGTGGCGGCGCATCGACAGCACCCTCAGAGACGCGCCCACGGCCGAG
GCTGAACAGTTACAGCAAGCCTGGACCGTGGGAAAGTTGTTGTGGGAGCG
ACGAACCAGTTTGACACAGCTTACGGCAACCCCCAACTCCTTTTGGCGGC
CCAGATCCTTCTTCTTCTCATTCTTAACGACCTATGGAAGTCGATGCGCC
CGAATCTCCGCCACCGGATGCCGCTGCTGTGCCTACTACTACCACTACTT
CGTCCAAACCTTTGACCGAGCAACTGGCCAATGCCCTTTCCCAGCACGAT
TATTCCCTGGCTTTGCGCGTGGCCAACGAGCTAGAGATTGGCATTCAG back to top
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