jgi.p|Nanoce1779_2|638949, gene_4860 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|638949
Unique Namegene_4860
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:794924..805282 -

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Properties
Property NameValue
TranscriptId639035
ProteinId638949
Product nameAdaptin N terminal region-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:794924..805282 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005198structural molecule activity
GO:0003824catalytic activity
GO:0005515protein binding
GO:0008080N-acetyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0030126COPI vesicle coat
GO:0030117membrane coat
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G02980NO15G02980Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638949mRNA_4860-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638949mRNA_4860Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|638949

>mRNA_4860-protein ID=mRNA_4860-protein|Name=jgi.p|Nanoce1779_2|638949|organism=Nannochloropsis oceanica|type=polypeptide|length=1484bp
MQAHHVMRRLTAADIPKAHELEVLSYPEDEAASLEGMRFRQAQAGPFFYG
LFDQRTSDLLALINGTLCMGTTLEHDTMSTHDPDGSTLCIHSVVVQPHLR
KQGLATSFLRAYIREILAEHPHTLLRMRLITKVHNVGLYQRCGFTFLRPS
PVVHGLEKWFEMGLDRLSLLESEGRAGRGRGREYIQVDAFTQEAFGGNPA
SVVFCRGGETADWMQNWAREFNLSETAFVTPSSSSSSSSSSSSSSSSSTF
ALRWFTPTIEVDLCGHATLAAAHALWVTGRVECKSEIVFETLSGNLVARR
KVEEDAEGGEGGGRGGGGGWIELDFPSEPVVKPVGDSELNKMEKELQKLY
EAFGLTKAEDKRKVRERKRRELVDEQGPESQEEEEEVGSERGGTEEEDDI
VFMARSRMDVLVVLTPGAFRLVKKRKPDMAILRTIECRGIIITCHAERRK
MKREGMDLNAAYEGKDNYDFYSRFFGPRCGIDEDPVTGSAHCCLAPYWHA
RLGKTKLEGYQDSQRGGVVRMVYVPAASRVYLSGQAVVFMPENSATSLML
GPGMAPPRIDGGNSDGALTVSSMMKEIQVLKDKFKNDDEDHFSPYQDLEK
ATVLQECRVFHDANIVTQDPRRCCQLITKLLHILTQGDQLTSVETTTVFF
GVTKLFQSTNQNLRRMMYLFIKEVAETCNPDDVIIVTSSLTKDMNSREDL
YRANAIRVLSKIIDSTMLGAIERYMKQAIVDKNPLVASSALVAGRHLMQR
SPEIVRRWVNEVQEAVNSPHEMVQAHALSLLYEIKHKDRLAVSKLVSQLS
RGSLRSPLAICCLIRYIITLIHDDPQGAAAKSGAQFLEGCLRHKNEMVIY
EAAKAICNLPGVEARDLGPAVTVLQLFLASPRPAFRSSAPCAPFPSYPVV
VTRCNDDMEALLADPNRSIGTLAITTLLKTGEEASIDRLMKQISSYMNDI
ADEFKILIVQSIKQLCTPHKHALLVGFLANFLREEGGFEYKKAITEAIVS
LMDAIPQTKDTSLFHLCEFIEDCEFTDLSTQILHLIGDLGPTAASPARYI
RFIYNRVILENAVVRAAAVSTLAKFAVRVPSLRPSICVLLQRSLQDEDDE
VRDRVTLSLSLLTPSSDPTSASLLLSPLPLPWHNLERAVMQFTQHAAGTK
PLTFQSLPVVEDLPPPPSAHQTPSGAGSTSAGGGKSAPSSSTGATSAAAS
SSSSSRTPPTPSVDAAAALAAVPALASLGRVFRSTFPPVPLTESETEYVV
TCIKHIYEDGQTLVLHFSVVNTIPEQKLLNVRVHVDPQELYTVAGVVPLQ
ALPYGATPGSTYVVLRREPDSVITPESLECQLLFNVMDVDPVSGEVEGDA
AGFAEEYALEALEVNTSDYMAKVAPLGDFKKSWESLGPEQEVMEHFQLQF
KDLNEAIVAVIDYLGMQPCDGTAALGKAGATTHNLHLSGVFVGNQQVLVR
AQLQADQAAGIVLKIAVRSEDVNLSQMVADCIR*
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Synonyms
Publications