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Properties
Property Name | Value |
TranscriptId | 10302 |
Track | FilteredModels2 |
ProteinId | 10216 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_1 | supercontig | scaffold_1:885893..887309 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1534 ID=mRNA_1534|Name=jgi.p|Nanoce1779_2|10216|organism=Nannochloropsis oceanica|type=mRNA|length=851bp ACGCATTACGCTACCAATCGATAATATCGTTCGTTTGGTGATCTGTGCCC CAATGATATCTGTAATTTGGTGCTGAAGCTGTCCATTTCCCTTTCACGCG CAAGACATACAGGCCTTTGCGCCTCTCCCTTCTCTTCCTGTACCATGAGA CGGATTCGCCTAGCCTGGAATGTCTCATCTCACAGCATGAGGAGAGGCAT CGTGCGACTGAGGACACTTGTACCCCCGCATTCTCGAGCCATCACCAGCA AGCCCTACCTATGCAGAAATCAAGACGATAGCAGCAGTAGCGGTCACAAT AGCCCGTTGGTGCCGCCATCCACCTGGTCCCTCCACGATTTGGGATTGCT GCACAAGGATGCAGTCGCGGGGGCAGGGAGCGACGCCTTGAACGAAGACG AGCTATCACGGCTAGCTGGATATGCACATTTGGATTTGGACGGGGTGAAC GTCGATCGGGAGTCCTTGCAGCGGGACCTTGGGGCCATTATCAATTGCAT GACATTGCTGCAGACGGCGGACCTAAGTGACGTGAGCAAGGAGGAGATGT ATGCGCCGCCTGAATACGCCCAAGCATCGGCACGCCTAAGAAAAGATGTG GTCACGGAAGGAGGACTGGACAAGGAGGATCAGGTGCTGGCTAATACCAA GGAGACAGCCCATAATCAGTTTGTCGTCCCGCTCGTCAACTGCAAGTGAG ATTTCGATGCATAAAGTTCCACACAATAAAGTTGATTCAGCGTTAGAAGG GTGGGATTTGTAATTCAAATAAGCTCGACAGTCGGAAGCACCGGTGGACG AAATGCAAGGCATCTTTCCTTTTCCTCCACAGCGACCTCACCGACTGGCT T back to topprotein sequence of jgi.p|Nanoce1779_2|10216 >mRNA_1534-protein ID=mRNA_1534-protein|Name=jgi.p|Nanoce1779_2|10216|organism=Nannochloropsis oceanica|type=polypeptide|length=185bp MRRIRLAWNVSSHSMRRGIVRLRTLVPPHSRAITSKPYLCRNQDDSSSSG HNSPLVPPSTWSLHDLGLLHKDAVAGAGSDALNEDELSRLAGYAHLDLDG VNVDRESLQRDLGAIINCMTLLQTADLSDVSKEEMYAPPEYAQASARLRK DVVTEGGLDKEDQVLANTKETAHNQFVVPLVNCK* back to topmRNA from alignment at scaffold_1:885893..887309- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1534 ID=mRNA_1534|Name=jgi.p|Nanoce1779_2|10216|organism=Nannochloropsis oceanica|type=mRNA|length=1417bp|location=Sequence derived from alignment at scaffold_1:885893..887309- (Nannochloropsis oceanica) ACGCATTACGCTACCAATCGATAATATCGTTCGTTTGGTGATCTGTGCCC
CAATGATATCTGTAATTTGGTGCTGAAGCTGTCCATTTCCCTTTCACGCG
CAAGACATACAGGCCTTTGCGCCTCTCCCTTCTCTTCCTGTACCATGAGA
CGGATTCGCCTAGCCTGGAATGTCTCATCTCACAGCATGAGGAGAGGCAT
CGTGCGACTGAGGTACGTTCGTTGAATTCACCGTCATGTAGTGGCATGTG
TGTGTATGGCGCTTTCCATTCCTTGTCCTCTCCTCAGTTATGTTGCCCCT
CATCTCCTCTCACCTTCACCCAATTGTGCAGGACACTTGTACCCCCGCAT
TCTCGAGCCATCACCAGCAAGCCCTACCTATGCAGAAATCAAGACGATAG
CAGCAGTAGCGGTCACAATAGCCCGTTGGTGCCGCCATCCACCTGGTCCC
TCCACGATTTGGGATTGCTGCACAAGGATGCAGTCGCGGGGGCAGGGAGC
GACGCCTTGAACGAAGACGAGGTAGGGAGATCAGAAGGGGGAGGCATTTT
GCGTCTGAAGCAATTGTTGTTCTCGCCAATAAAAGGATTCAGAAAGTTGT
TGGGAATGGGTGGTGTGTGTACATAGGTTCCAATATATGCAGGCGCTGAG
TCCGCACGTTGCATGTCTCCGTTCAACTTATTTTTCTTTATTTTCCCCCT
TGCTCACGCATATGATAATGGTCAGCTATCACGGCTAGCTGGATATGCAC
ATTTGGATTTGGACGGGGTGAACGTCGATCGGGAGTCCTTGCAGCGGGAC
CTTGGGGCCATTATCAATTGCATGACATTGCTGCAGGTCTGTCTGTTACT
GCTCTCTCTTTAATTGAGTGAATTCGGGACGAGTTGAGGACCATATACTT
CAGAAACAAGGTCAAGGTCATTCAAATCTCTCATACTCATAATATTTTGT
CAAACGTAGACGGCGGACCTAAGTGACGTGAGCAAGGAGGAGATGTATGC
GCCGCCTGAATACGCCCAAGCATCGGCACGCCTAAGAAAAGATGTGGTCA
CGGAAGGAGGTGAGATTGTAGGGAATCGGAGGAAGAGAGCAATATTTTGG
GTGCTTAAACATCTTCAGTCATTTTTGTCACATCATACTCCCACATCTAT
ATACTTCGCCCGCACATCTCTGATTGCAGGACTGGACAAGGAGGATCAGG
TGCTGGCTAATACCAAGGAGACAGCCCATAATCAGTTTGTCGTCCCGCTC
GTCAACTGCAAGTGAGATTTCGATGCATAAAGTTCCACACAATAAAGTTG
ATTCAGCGTTAGAAGGGTGGGATTTGTAATTCAAATAAGCTCGACAGTCG
GAAGCACCGGTGGACGAAATGCAAGGCATCTTTCCTTTTCCTCCACAGCG
ACCTCACCGACTGGCTT back to topCoding sequence (CDS) from alignment at scaffold_1:885893..887309- >mRNA_1534 ID=mRNA_1534|Name=jgi.p|Nanoce1779_2|10216|organism=Nannochloropsis oceanica|type=CDS|length=2775bp|location=Sequence derived from alignment at scaffold_1:885893..887309- (Nannochloropsis oceanica) GACTGGACAAGGAGGATCAGGTGCTGGCTAATACCAAGGAGACAGCCCAT AATCAGTTTGTCGTCCCGCTCGTCAACTGCAAGTGAACGGCGGACCTAAG TGACGTGAGCAAGGAGGAGATGTATGCGCCGCCTGAATACGCCCAAGCAT CGGCACGCCTAAGAAAAGATGTGGTCACGGAAGGAGCTATCACGGCTAGC TGGATATGCACATTTGGATTTGGACGGGGTGAACGTCGATCGGGAGTCCT TGCAGCGGGACCTTGGGGCCATTATCAATTGCATGACATTGCTGCAGGAC ACTTGTACCCCCGCATTCTCGAGCCATCACCAGCAAGCCCTACCTATGCA GAAATCAAGACGATAGCAGCAGTAGCGGTCACAATAGCCCGTTGGTGCCG CCATCCACCTGGTCCCTCCACGATTTGGGATTGCTGCACAAGGATGCAGT CGCGGGGGCAGGGAGCGACGCCTTGAACGAAGACGAGATGAGACGGATTC GCCTAGCCTGGAATGTCTCATCTCACAGCATGAGGAGAGGCATCGTGCGA CTGAGGACTGGACAAGGAGGATCAGGTGCTGGCTAATACCAAGGAGACAG CCCATAATCAGTTTGTCGTCCCGCTCGTCAACTGCAAGTGAACGGCGGAC CTAAGTGACGTGAGCAAGGAGGAGATGTATGCGCCGCCTGAATACGCCCA AGCATCGGCACGCCTAAGAAAAGATGTGGTCACGGAAGGAGCTATCACGG CTAGCTGGATATGCACATTTGGATTTGGACGGGGTGAACGTCGATCGGGA GTCCTTGCAGCGGGACCTTGGGGCCATTATCAATTGCATGACATTGCTGC AGGACACTTGTACCCCCGCATTCTCGAGCCATCACCAGCAAGCCCTACCT ATGCAGAAATCAAGACGATAGCAGCAGTAGCGGTCACAATAGCCCGTTGG TGCCGCCATCCACCTGGTCCCTCCACGATTTGGGATTGCTGCACAAGGAT GCAGTCGCGGGGGCAGGGAGCGACGCCTTGAACGAAGACGAGATGAGACG GATTCGCCTAGCCTGGAATGTCTCATCTCACAGCATGAGGAGAGGCATCG TGCGACTGAGGACTGGACAAGGAGGATCAGGTGCTGGCTAATACCAAGGA GACAGCCCATAATCAGTTTGTCGTCCCGCTCGTCAACTGCAAGTGAACGG CGGACCTAAGTGACGTGAGCAAGGAGGAGATGTATGCGCCGCCTGAATAC GCCCAAGCATCGGCACGCCTAAGAAAAGATGTGGTCACGGAAGGAGCTAT CACGGCTAGCTGGATATGCACATTTGGATTTGGACGGGGTGAACGTCGAT CGGGAGTCCTTGCAGCGGGACCTTGGGGCCATTATCAATTGCATGACATT GCTGCAGGACACTTGTACCCCCGCATTCTCGAGCCATCACCAGCAAGCCC TACCTATGCAGAAATCAAGACGATAGCAGCAGTAGCGGTCACAATAGCCC GTTGGTGCCGCCATCCACCTGGTCCCTCCACGATTTGGGATTGCTGCACA AGGATGCAGTCGCGGGGGCAGGGAGCGACGCCTTGAACGAAGACGAGATG AGACGGATTCGCCTAGCCTGGAATGTCTCATCTCACAGCATGAGGAGAGG CATCGTGCGACTGAGGACTGGACAAGGAGGATCAGGTGCTGGCTAATACC AAGGAGACAGCCCATAATCAGTTTGTCGTCCCGCTCGTCAACTGCAAGTG AACGGCGGACCTAAGTGACGTGAGCAAGGAGGAGATGTATGCGCCGCCTG AATACGCCCAAGCATCGGCACGCCTAAGAAAAGATGTGGTCACGGAAGGA GCTATCACGGCTAGCTGGATATGCACATTTGGATTTGGACGGGGTGAACG TCGATCGGGAGTCCTTGCAGCGGGACCTTGGGGCCATTATCAATTGCATG ACATTGCTGCAGGACACTTGTACCCCCGCATTCTCGAGCCATCACCAGCA AGCCCTACCTATGCAGAAATCAAGACGATAGCAGCAGTAGCGGTCACAAT AGCCCGTTGGTGCCGCCATCCACCTGGTCCCTCCACGATTTGGGATTGCT GCACAAGGATGCAGTCGCGGGGGCAGGGAGCGACGCCTTGAACGAAGACG AGATGAGACGGATTCGCCTAGCCTGGAATGTCTCATCTCACAGCATGAGG AGAGGCATCGTGCGACTGAGGACTGGACAAGGAGGATCAGGTGCTGGCTA ATACCAAGGAGACAGCCCATAATCAGTTTGTCGTCCCGCTCGTCAACTGC AAGTGAACGGCGGACCTAAGTGACGTGAGCAAGGAGGAGATGTATGCGCC GCCTGAATACGCCCAAGCATCGGCACGCCTAAGAAAAGATGTGGTCACGG AAGGAGCTATCACGGCTAGCTGGATATGCACATTTGGATTTGGACGGGGT GAACGTCGATCGGGAGTCCTTGCAGCGGGACCTTGGGGCCATTATCAATT GCATGACATTGCTGCAGGACACTTGTACCCCCGCATTCTCGAGCCATCAC CAGCAAGCCCTACCTATGCAGAAATCAAGACGATAGCAGCAGTAGCGGTC ACAATAGCCCGTTGGTGCCGCCATCCACCTGGTCCCTCCACGATTTGGGA TTGCTGCACAAGGATGCAGTCGCGGGGGCAGGGAGCGACGCCTTGAACGA AGACGAGATGAGACGGATTCGCCTAGCCTGGAATGTCTCATCTCACAGCA TGAGGAGAGGCATCGTGCGACTGAG back to top
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