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Properties
| Property Name | Value |
|---|
| TranscriptId | 571590 |
| Track | FilteredModels2 |
| ProteinId | 571504 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:118940..120154 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1257 ID=mRNA_1257|Name=jgi.p|Nanoce1779_2|571504|organism=Nannochloropsis oceanica|type=mRNA|length=1112bp
GGAAAGAGAGAGAGTACCAATCAAGGTTCTGGTGGAGGATTGTCTGTTGG
AAGTCCGTCAAGGGGGAGGGAGGGAGGGAGGAAGGGAGAGGGGAAAGTGG
AGAAGCTTCGCGGTGGAGGGACGCATGGAGGATGTGCAGCTGTTTCTGTC
CGGCACGAAGCTGGGCAGATGGGTGTATGAGGGAGCGAGAAACGGGCAGG
CGGTACTCAACAGCTATCCGGGATTTTTGATGCGCTTAAAGGAGGATACA
GGGAGGGAGGGAAGGAAGGAAGAAGGCTTTGAAGGGAGAGGGAAAGGAAA
GGAGAGAAAAGCGAAGGGACAAGTCAAAACGCACCTACAGGAGAAGGAGG
CGAAGAACGACAACGACGGCGAGGACGAGGACGAGGACGTGAAGGAGGGC
AAGAAGGAGGGCGAGGTGCCTGCGACGAGACCAGCCCTCCCAGAGGTTTG
CCCCGTATCTGCCGCAGCTGTGGCGGCGCTCACAGCTTCTACTTTGTACC
CTATCCCGCCCCTACCCCTCAATCCGTATCGGGGGATTAAAAAGGCGTGT
AAACTCAAGCAGGTTAGTCTGGTCTGTGTGCGGCACCCAAAGACGGGCAA
GTTCTTGGCAGTGGAAGAAACGAGAGACAGAGGCTGGTGGCTCCCTGCCG
GAAATGTGGACCCGGGGGAAACATTTGCCCAAGCCGCGTACAGGGAGACG
TTGGAAGAAGCAGGGATAGGGATCAAAATTGAGGGGCTGTTGCGGGTGGA
ACACCGTCGGACAGAGGCGACCAGCGGGCGGATGAGGGTGGTTTTTTATG
GATCTCCGATTCACGAGGATGCTCCGTTGAAAAGTACGCCGGATGGGGAA
AGTTTGCGCGCGAAATGGATGACGCCGAAGGACATGAAGGGGTTGAAGCT
GAGGAGTCGGGAGGTGATTGAGTGGGCGGAATATGTGGAGGGAGGAGGGG
TTATTTATCCCCTTAGTCTATTGGCGGAGGAGGGAGAACCGGTATTATCG
CGGTAGCCCATCCCTCCCTCCCTCTCTACCTCTTGGGCTTGGGATTATGA
AGAAAGGTTTGGAGGTCGAGGGCGCAAAGGCAGTGTGGGATTGGGGGTGG
GGGGAGAGGGGC back to topprotein sequence of jgi.p|Nanoce1779_2|571504 >mRNA_1257-protein ID=mRNA_1257-protein|Name=jgi.p|Nanoce1779_2|571504|organism=Nannochloropsis oceanica|type=polypeptide|length=294bp
MEDVQLFLSGTKLGRWVYEGARNGQAVLNSYPGFLMRLKEDTGREGRKEE
GFEGRGKGKERKAKGQVKTHLQEKEAKNDNDGEDEDEDVKEGKKEGEVPA
TRPALPEVCPVSAAAVAALTASTLYPIPPLPLNPYRGIKKACKLKQVSLV
CVRHPKTGKFLAVEETRDRGWWLPAGNVDPGETFAQAAYRETLEEAGIGI
KIEGLLRVEHRRTEATSGRMRVVFYGSPIHEDAPLKSTPDGESLRAKWMT
PKDMKGLKLRSREVIEWAEYVEGGGVIYPLSLLAEEGEPVLSR* back to topmRNA from alignment at scaffold_1:118940..120154- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1257 ID=mRNA_1257|Name=jgi.p|Nanoce1779_2|571504|organism=Nannochloropsis oceanica|type=mRNA|length=1215bp|location=Sequence derived from alignment at scaffold_1:118940..120154- (Nannochloropsis oceanica)
GGAAAGAGAGAGAGTACCAATCAAGGTTCTGGTGGAGGATTGTCTGTTGG
AAGTCCGTCAAGGGGGAGGGAGGGAGGGAGGAAGGGAGAGGGGAAAGTGG
AGAAGCTTCGCGGTGGAGGGACGCATGGAGGATGTGCAGCTGTTTCTGTC
CGGCACGAAGCTGGGCAGATGGGTGTATGAGGGAGCGAGAAACGGGCAGG
CGGTACTCAACAGCTATCCGGGATTTTTGATGCGCTTAAAGGAGGATACA
GGGAGGGAGGGAAGGAAGGAAGAAGGCTTTGAAGGGAGAGGGAAAGGAAA
GGAGAGAAAAGCGAAGGGACAAGTCAAAACGCACCTACAGGAGAAGGAGG
CGAAGAACGACAACGACGGCGAGGACGAGGACGAGGACGTGAAGGAGGGC
AAGAAGGAGGGCGAGGTGCCTGCGACGAGACCAGCCCTCCCAGAGGTTTG
CCCCGTATCTGCCGCAGCTGTGGCGGCGCTCACAGCTTCTACTTTGTACC
CTATCCCGCCCCTACCCCTCAATCCGTATCGGGGGATTAAAAAGGCGTGT
AAACTCAAGCAGGTTAGTCTGGTCTGTGTGCGGCACCCAAAGACGGGCAA
GTTCTTGGCAGTGGAAGAAACGAGAGGTAAGAGACGAGGGAGAAAGGGAG
GGAGGGAGGGAGGGAGGGGGATATGGGGGTGGGGAGGATTATTTTGAAAC
TGAATTGCTCCCTCCTTCCCATCCAACAGACAGAGGCTGGTGGCTCCCTG
CCGGAAATGTGGACCCGGGGGAAACATTTGCCCAAGCCGCGTACAGGGAG
ACGTTGGAAGAAGCAGGGATAGGGATCAAAATTGAGGGGCTGTTGCGGGT
GGAACACCGTCGGACAGAGGCGACCAGCGGGCGGATGAGGGTGGTTTTTT
ATGGATCTCCGATTCACGAGGATGCTCCGTTGAAAAGTACGCCGGATGGG
GAAAGTTTGCGCGCGAAATGGATGACGCCGAAGGACATGAAGGGGTTGAA
GCTGAGGAGTCGGGAGGTGATTGAGTGGGCGGAATATGTGGAGGGAGGAG
GGGTTATTTATCCCCTTAGTCTATTGGCGGAGGAGGGAGAACCGGTATTA
TCGCGGTAGCCCATCCCTCCCTCCCTCTCTACCTCTTGGGCTTGGGATTA
TGAAGAAAGGTTTGGAGGTCGAGGGCGCAAAGGCAGTGTGGGATTGGGGG
TGGGGGGAGAGGGGC back to topCoding sequence (CDS) from alignment at scaffold_1:118940..120154- >mRNA_1257 ID=mRNA_1257|Name=jgi.p|Nanoce1779_2|571504|organism=Nannochloropsis oceanica|type=CDS|length=1764bp|location=Sequence derived from alignment at scaffold_1:118940..120154- (Nannochloropsis oceanica)
ACAGAGGCTGGTGGCTCCCTGCCGGAAATGTGGACCCGGGGGAAACATTT
GCCCAAGCCGCGTACAGGGAGACGTTGGAAGAAGCAGGGATAGGGATCAA
AATTGAGGGGCTGTTGCGGGTGGAACACCGTCGGACAGAGGCGACCAGCG
GGCGGATGAGGGTGGTTTTTTATGGATCTCCGATTCACGAGGATGCTCCG
TTGAAAAGTACGCCGGATGGGGAAAGTTTGCGCGCGAAATGGATGACGCC
GAAGGACATGAAGGGGTTGAAGCTGAGGAGTCGGGAGGTGATTGAGTGGG
CGGAATATGTGGAGGGAGGAGGGGTTATTTATCCCCTTAGTCTATTGGCG
GAGGAGGGAGAACCGGTATTATCGCGGTAGATGGAGGATGTGCAGCTGTT
TCTGTCCGGCACGAAGCTGGGCAGATGGGTGTATGAGGGAGCGAGAAACG
GGCAGGCGGTACTCAACAGCTATCCGGGATTTTTGATGCGCTTAAAGGAG
GATACAGGGAGGGAGGGAAGGAAGGAAGAAGGCTTTGAAGGGAGAGGGAA
AGGAAAGGAGAGAAAAGCGAAGGGACAAGTCAAAACGCACCTACAGGAGA
AGGAGGCGAAGAACGACAACGACGGCGAGGACGAGGACGAGGACGTGAAG
GAGGGCAAGAAGGAGGGCGAGGTGCCTGCGACGAGACCAGCCCTCCCAGA
GGTTTGCCCCGTATCTGCCGCAGCTGTGGCGGCGCTCACAGCTTCTACTT
TGTACCCTATCCCGCCCCTACCCCTCAATCCGTATCGGGGGATTAAAAAG
GCGTGTAAACTCAAGCAGGTTAGTCTGGTCTGTGTGCGGCACCCAAAGAC
GGGCAAGTTCTTGGCAGTGGAAGAAACGAGAGACAGAGGCTGGTGGCTCC
CTGCCGGAAATGTGGACCCGGGGGAAACATTTGCCCAAGCCGCGTACAGG
GAGACGTTGGAAGAAGCAGGGATAGGGATCAAAATTGAGGGGCTGTTGCG
GGTGGAACACCGTCGGACAGAGGCGACCAGCGGGCGGATGAGGGTGGTTT
TTTATGGATCTCCGATTCACGAGGATGCTCCGTTGAAAAGTACGCCGGAT
GGGGAAAGTTTGCGCGCGAAATGGATGACGCCGAAGGACATGAAGGGGTT
GAAGCTGAGGAGTCGGGAGGTGATTGAGTGGGCGGAATATGTGGAGGGAG
GAGGGGTTATTTATCCCCTTAGTCTATTGGCGGAGGAGGGAGAACCGGTA
TTATCGCGGTAGATGGAGGATGTGCAGCTGTTTCTGTCCGGCACGAAGCT
GGGCAGATGGGTGTATGAGGGAGCGAGAAACGGGCAGGCGGTACTCAACA
GCTATCCGGGATTTTTGATGCGCTTAAAGGAGGATACAGGGAGGGAGGGA
AGGAAGGAAGAAGGCTTTGAAGGGAGAGGGAAAGGAAAGGAGAGAAAAGC
GAAGGGACAAGTCAAAACGCACCTACAGGAGAAGGAGGCGAAGAACGACA
ACGACGGCGAGGACGAGGACGAGGACGTGAAGGAGGGCAAGAAGGAGGGC
GAGGTGCCTGCGACGAGACCAGCCCTCCCAGAGGTTTGCCCCGTATCTGC
CGCAGCTGTGGCGGCGCTCACAGCTTCTACTTTGTACCCTATCCCGCCCC
TACCCCTCAATCCGTATCGGGGGATTAAAAAGGCGTGTAAACTCAAGCAG
GTTAGTCTGGTCTGTGTGCGGCACCCAAAGACGGGCAAGTTCTTGGCAGT
GGAAGAAACGAGAG back to top
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