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Properties
Property Name | Value |
TranscriptId | 573415 |
Track | FilteredModels2 |
ProteinId | 573329 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_1 | supercontig | scaffold_1:1413155..1413832 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1756 ID=mRNA_1756|Name=jgi.p|Nanoce1779_2|573329|organism=Nannochloropsis oceanica|type=mRNA|length=589bp CAGCAGATCCACGGGAAGTTGACATGCACGACGACCACCTCTCTGCCACC CACAGCACCTTTGACCCGGCATTGTTTGAAGAACTGGTGTATGCATGCGT TAATCGCGTCCCCCGGGGCCGCGTCACTACCTACGGACACATTGCGCGCC TTTGTCACCATCCAAAGCATGCGCGGCATGTCGGAAAAGCCCTGCAGCGC CTGCCTTCAAATACTCATGTTCCGTGGCAGCGAATTATCAATGCGTCCTA TTCCATTTCCTCGCGGGGGGACGGAGGCGCAGGCGCCCGTCTGCAAGCTG CTAGGTTGGAGGAAGAAGGAGTGGCCCTGACTCAGGATTCCATGGGCGTG TGGAAAGTTTCAGCGGGTGCTATGTGGAAGACAGGCCAGGCACAGTCACT AGAGGACCTCTTAAAGGAAGAAGGTGGAGGGGGCGAGGGAGAAGGAGGGT ACGTGAAGAAGAGTAAGAACGGCAAGGAGCGAAAAAGGGTGAATAAGCAA GTTGTTGTGGATAGAGAGGGAGAAGGAGGGGAAGAGGGGGCACAATGACT CTCTGACTGTATAATCAAGAACTAGTTCGATTATTTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|573329 >mRNA_1756-protein ID=mRNA_1756-protein|Name=jgi.p|Nanoce1779_2|573329|organism=Nannochloropsis oceanica|type=polypeptide|length=175bp MHDDHLSATHSTFDPALFEELVYACVNRVPRGRVTTYGHIARLCHHPKHA RHVGKALQRLPSNTHVPWQRIINASYSISSRGDGGAGARLQAARLEEEGV ALTQDSMGVWKVSAGAMWKTGQAQSLEDLLKEEGGGGEGEGGYVKKSKNG KERKRVNKQVVVDREGEGGEEGAQ* back to topmRNA from alignment at scaffold_1:1413155..1413832+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1756 ID=mRNA_1756|Name=jgi.p|Nanoce1779_2|573329|organism=Nannochloropsis oceanica|type=mRNA|length=678bp|location=Sequence derived from alignment at scaffold_1:1413155..1413832+ (Nannochloropsis oceanica) CAGCAGATCCACGGGAAGTTGACATGCACGACGACCACCTCTCTGCCACC
CACAGCACCTTTGACCCGGCATTGTTTGAAGAACTGGTGTATGCATGCGT
TAATCGCGTCCCCCGGGGCCGCGTCACTACCTACGGTAAGTCGACAGCAA
ACCAGATTCTCTGCTTTTTTTGCTTAGCTGTCTTTCCTTACTATCCTCTT
TTACTACACCGACTCCCAACGCAGGACACATTGCGCGCCTTTGTCACCAT
CCAAAGCATGCGCGGCATGTCGGAAAAGCCCTGCAGCGCCTGCCTTCAAA
TACTCATGTTCCGTGGCAGCGAATTATCAATGCGTCCTATTCCATTTCCT
CGCGGGGGGACGGAGGCGCAGGCGCCCGTCTGCAAGCTGCTAGGTTGGAG
GAAGAAGGAGTGGCCCTGACTCAGGATTCCATGGGCGTGTGGAAAGTTTC
AGCGGGTGCTATGTGGAAGACAGGCCAGGCACAGTCACTAGAGGACCTCT
TAAAGGAAGAAGGTGGAGGGGGCGAGGGAGAAGGAGGGTACGTGAAGAAG
AGTAAGAACGGCAAGGAGCGAAAAAGGGTGAATAAGCAAGTTGTTGTGGA
TAGAGAGGGAGAAGGAGGGGAAGAGGGGGCACAATGACTCTCTGACTGTA
TAATCAAGAACTAGTTCGATTATTTTGA back to topCoding sequence (CDS) from alignment at scaffold_1:1413155..1413832+ >mRNA_1756 ID=mRNA_1756|Name=jgi.p|Nanoce1779_2|573329|organism=Nannochloropsis oceanica|type=CDS|length=1050bp|location=Sequence derived from alignment at scaffold_1:1413155..1413832+ (Nannochloropsis oceanica) ATGCACGACGACCACCTCTCTGCCACCCACAGCACCTTTGACCCGGCATT GTTTGAAGAACTGGTGTATGCATGCGTTAATCGCGTCCCCCGGGGCCGCG TCACTACCTACGGACACATTGCGCGCCTTTGTCACCATCCAAAGCATGCG CGGCATGTCGGAAAAGCCCTGCAGCGCCTGCCTTCAAATACTCATGTTCC GTGGCAGCGAATTATCAATGCGTCCTATTCCATTTCCTCGCGGGGGGACG GAGGCGCAGGCGCCCGTCTGCAAGCTGCTAGGTTGGAGGAAGAAGGAGTG GCCCTGACTCAGGATTCCATGGGCGTGTGGAAAGTTTCAGCGGGTGCTAT GTGGAAGACAGGCCAGGCACAGTCACTAGAGGACCTCTTAAAGGAAGAAG GTGGAGGGGGCGAGGGAGAAGGAGGGTACGTGAAGAAGAGTAAGAACGGC AAGGAGCGAAAAAGGGTGAATAAGCAAGTTGTTGTGGATAGAGAGGGAGA AGGAGGGGAAGAGGGGGCACAATGAATGCACGACGACCACCTCTCTGCCA CCCACAGCACCTTTGACCCGGCATTGTTTGAAGAACTGGTGTATGCATGC GTTAATCGCGTCCCCCGGGGCCGCGTCACTACCTACGGACACATTGCGCG CCTTTGTCACCATCCAAAGCATGCGCGGCATGTCGGAAAAGCCCTGCAGC GCCTGCCTTCAAATACTCATGTTCCGTGGCAGCGAATTATCAATGCGTCC TATTCCATTTCCTCGCGGGGGGACGGAGGCGCAGGCGCCCGTCTGCAAGC TGCTAGGTTGGAGGAAGAAGGAGTGGCCCTGACTCAGGATTCCATGGGCG TGTGGAAAGTTTCAGCGGGTGCTATGTGGAAGACAGGCCAGGCACAGTCA CTAGAGGACCTCTTAAAGGAAGAAGGTGGAGGGGGCGAGGGAGAAGGAGG GTACGTGAAGAAGAGTAAGAACGGCAAGGAGCGAAAAAGGGTGAATAAGC AAGTTGTTGTGGATAGAGAGGGAGAAGGAGGGGAAGAGGGGGCACAATGA back to top
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