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Properties
| Property Name | Value |
|---|
| TranscriptId | 543755 |
| Track | FilteredModels2 |
| ProteinId | 543669 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:654848..657094 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6156 ID=mRNA_6156|Name=jgi.p|Nanoce1779_2|543669|organism=Nannochloropsis oceanica|type=mRNA|length=1221bp
CCCCCCCCCCCCCCGGCTCTCAGAATGGTTTTCCGTCCCTGTATCGACCT
GCACGCCGGCAAAGTGAAGCAAATCGTGGGCTCGTCTTTGACAGGGAATG
ACGCTGCACTCGTGACCAATTTCGAGGCCAAGATGAGTGCCGAGGATTTT
GCCAAAATGTACCAATCCGACGACCTCAAAGGGGGGCACGTCATCATGCT
GGGCGATGGCTGTGAAGAGGCCGCTCTTGCCGCCTTGCGTGCGTACCCGG
GGGGTTTGCAGATAGGGGGCGGAGTGACGCCGGAGAGCGCACAGAGATAC
GTAGACGCTGGCGCGAGCCATGTGATTGTGACGTCTTATTTATTCTCGGG
CAAGGAGTTGGATTTTGAGAAATTAAAGAAGATGGAGGGGGTAGTGGGGA
AGGAGAAGCTGGTGGTGGATCTAAGCTGTCGGCGGAAAGCGGAGGACGGC
CCAGAGGGGCCCTACTACGTGGTGAAGGACAAGTGGCAAACGTACACGGA
CTTTCAAATTAACCGAGAGAACCTGGCGAAGCTCTCTAAGCACTGCGACG
AGTTCCTGGTGCACGGCGTGGACGTGGAGGGCCTGAAAGTGGGGATACTG
GAGGACCTCGTGGTCCTTCTCGGGGACATCAGCCCCTTGCCAGTCACCTA
CGCAGGCGGCGCCCGGTCGATCGAAGACTTGCAGCGCGTGACAGAGCTCG
GGAGAGGCAAGGTGGACCTGACAATCGGCAGTGCCTTAGACATCTTTGGT
GGTGCCTTGAGCTACTCGGATGTGGTCGAGTGGGACAAACGCAATGGCTA
CATTTAAATCCCGAAAAAGTGGAAAGCGAGTAAGGGAAGTAGGGAGGACA
GGAGGGTTAGGGGGTTGCTGTAGAATATGCGGCAAATGAGTATGAGTTAA
TAAAACCAAAGCAACTGTGTTAATGCGTCTTGGATGTCATTACTAAACGT
GCCATTTCTTATTTTGGTTGTTTCCTCTTGTCTTTTCCCGCTTTTCTTCC
CAGTCGGGGTCGGACCCCCTGCGGCAAGCACAAGAAGCATCGCCGCGGAA
AAAGTGTGCGTAAAGATTGCCCATCAAGTTGCAGTGCGGTGCAGGCCGAT
TGATTGAATGGCTGGCTGGCGTTTTCTGTTCAGATCACAGCCTTTTCACC
AAACATCTGCATTGTTTGTAAGGCGACGAGGAAGAGTTAAGAACATGCTT
GGTTCTGTCTCGGTGGTCATG back to topprotein sequence of jgi.p|Nanoce1779_2|543669 >mRNA_6156-protein ID=mRNA_6156-protein|Name=jgi.p|Nanoce1779_2|543669|organism=Nannochloropsis oceanica|type=polypeptide|length=261bp
MVFRPCIDLHAGKVKQIVGSSLTGNDAALVTNFEAKMSAEDFAKMYQSDD
LKGGHVIMLGDGCEEAALAALRAYPGGLQIGGGVTPESAQRYVDAGASHV
IVTSYLFSGKELDFEKLKKMEGVVGKEKLVVDLSCRRKAEDGPEGPYYVV
KDKWQTYTDFQINRENLAKLSKHCDEFLVHGVDVEGLKVGILEDLVVLLG
DISPLPVTYAGGARSIEDLQRVTELGRGKVDLTIGSALDIFGGALSYSDV
VEWDKRNGYI* back to topmRNA from alignment at scaffold_14:654848..657094- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6156 ID=mRNA_6156|Name=jgi.p|Nanoce1779_2|543669|organism=Nannochloropsis oceanica|type=mRNA|length=2247bp|location=Sequence derived from alignment at scaffold_14:654848..657094- (Nannochloropsis oceanica)
CCCCCCCCCCCCCCGGCTCTCAGAATGGTTTTCCGTCCCTGTATCGACCT
GCACGCCGGCAAAGTGAAGCAAATCGTGGGCTCGTCTTTGACAGGGAATG
ACGCTGCACTCGTGACCAATTTCGAGGCCAAGATGAGTGCCGAGGATTTT
GCCAAGTAAGAAGGAAGGAGGTTTTGAAGGGACGGGAGGGATGCAGGGAG
GGAGACAGGCGAAAAAGGTAGCGTGCTTGGTCCCTGACAGAGTTCGATGC
GACTTGAGGTAGTTAAGTGTATTGTACAACAAAACTTGGCGTTGCTCATG
CTAAGTTAAGGGCACCAGAAGGGACCTAAGAAACTCATCTTCATTGCTCT
TTCCCTCTTTACTTACACACTCTCCCTCCCTCTCTTTCACATACACTCTC
TCTCTCCCTCCTTTCCTCTTACTCCCTCCTCCTCGCTCAGAATGTACCAA
TCCGACGACCTCAAAGGGGGGCACGTCATCATGCTGGGCGATGGCTGTGA
AGAGGCCGCTCTTGCCGCCTTGCGTGCGTACCCGGGGGGTTTGCAGATAG
GGGGCGGAGTGACGCCGGAGAGCGCACAGAGATACGTAGACGCTGGCGCG
AGCCATGTGATTGTGACGTCTTATTTATTCTCGGGCAAGGAGTTGGATTT
TGAGAAATTAAAGAAGATGGAGGGGGTAGTGGGGAAGGAGAAGCTGGTAC
GTAGAAGCATGGAGGGACGATAAAGAGGAGGAGGACGGAAGCTTACACAC
ACGTCTTCTCTCGTACCATGTCCTCTTTTCTCTTTCATTTTTTTTCCCCT
TTTCCCTTCACACTCATGATTTGCCGGGACTGACCGTCCAGGTGGTGGAT
CTAAGCTGTCGGCGGAAAGCGGAGGACGGCCCAGAGGGGCCCTACTACGT
GGTGAAGGACAAGTGGCAAACGTACACGGACTTTCAAATTAAGTGAGCAA
AGAGGGTGGGACGGAGGGAGGGGGGGAGGGGGGAAGGAAGAAACGAGCCA
CATGGACGCCCATCGCCGGATCACTCTCTCCCTGCAAACCCCCCTTCCTC
CATTTTTGTGCCATGAAATCCTGCCCGAACTACCTTTGGGGGCACAGACG
TAAGTGAGAGGCACTTACCCTCTCCCTGCCTCCCTCACTCCCTGCCTCCC
TCAGCCGAGAGAACCTGGCGAAGCTCTCTAAGCACTGCGACGAGTTCCTG
GTGCACGGCGTGGACGTGGAGGGCCTGAAAGTGGGGATACTGGTGCGTGG
CTGTAGACTACTAGCTGTCTCGTAGTGAGAGAAGACTGGCAGACGGGGGC
TGGGATTGCACCAGCTGTTGCCACTTTCCTTCCTTTCTGTTTTTGATGAA
TGAATGAGTTGATTTTCCCTTCATTTCTGAAGATTAACCATTCCACTCCT
TTTGTTTCTCCCCTCCCTCCCAACGTGTCGCAACAGGAGGACCTCGTGGT
CCTTCTCGGGGACATCAGCCCCTTGCCAGTCACCTACGCAGGCGGCGCCC
GGTCGATCGAAGACTTGCAGCGCGTGACAGAGCTCGGGAGAGGCAAGGTA
CGCACGAGCACTTCGTCTTCAGTCGTTTTCCTGATTGTGAAGGTGTACAT
GCTACTTAAAGAAAAGCAATAAGTATAATAGATGTATTGTTGTGTACATG
AATACTTTCCGCAGGCGATGTAAGTCACGATCAACAAAACAATCAAAAAC
ATGAGAAGAGAATTTAACGATATATACATCGAAATAGGTGGACCTGACAA
TCGGCAGTGCCTTAGACATCTTTGGTGGTGCCTTGAGCTACTCGGATGTG
GTCGAGTGGGACAAACGCAATGGCTACATTTAAATCCCGAAAAAGTGGAA
AGCGAGTAAGGGAAGTAGGGAGGACAGGAGGGTTAGGGGGTTGCTGTAGA
ATATGCGGCAAATGAGTATGAGTTAATAAAACCAAAGCAACTGTGTTAAT
GCGTCTTGGATGTCATTACTAAACGTGCCATTTCTTATTTTGGTTGTTTC
CTCTTGTCTTTTCCCGCTTTTCTTCCCAGTCGGGGTCGGACCCCCTGCGG
CAAGCACAAGAAGCATCGCCGCGGAAAAAGTGTGCGTAAAGATTGCCCAT
CAAGTTGCAGTGCGGTGCAGGCCGATTGATTGAATGGCTGGCTGGCGTTT
TCTGTTCAGATCACAGCCTTTTCACCAAACATCTGCATTGTTTGTAAGGC
GACGAGGAAGAGTTAAGAACATGCTTGGTTCTGTCTCGGTGGTCATG back to topCoding sequence (CDS) from alignment at scaffold_14:654848..657094- >mRNA_6156 ID=mRNA_6156|Name=jgi.p|Nanoce1779_2|543669|organism=Nannochloropsis oceanica|type=CDS|length=4698bp|location=Sequence derived from alignment at scaffold_14:654848..657094- (Nannochloropsis oceanica)
GTGGACCTGACAATCGGCAGTGCCTTAGACATCTTTGGTGGTGCCTTGAG
CTACTCGGATGTGGTCGAGTGGGACAAACGCAATGGCTACATTTAAGAGG
ACCTCGTGGTCCTTCTCGGGGACATCAGCCCCTTGCCAGTCACCTACGCA
GGCGGCGCCCGGTCGATCGAAGACTTGCAGCGCGTGACAGAGCTCGGGAG
AGGCAAGCCGAGAGAACCTGGCGAAGCTCTCTAAGCACTGCGACGAGTTC
CTGGTGCACGGCGTGGACGTGGAGGGCCTGAAAGTGGGGATACTGGTGGT
GGATCTAAGCTGTCGGCGGAAAGCGGAGGACGGCCCAGAGGGGCCCTACT
ACGTGGTGAAGGACAAGTGGCAAACGTACACGGACTTTCAAATTAAAATG
TACCAATCCGACGACCTCAAAGGGGGGCACGTCATCATGCTGGGCGATGG
CTGTGAAGAGGCCGCTCTTGCCGCCTTGCGTGCGTACCCGGGGGGTTTGC
AGATAGGGGGCGGAGTGACGCCGGAGAGCGCACAGAGATACGTAGACGCT
GGCGCGAGCCATGTGATTGTGACGTCTTATTTATTCTCGGGCAAGGAGTT
GGATTTTGAGAAATTAAAGAAGATGGAGGGGGTAGTGGGGAAGGAGAAGC
TGATGGTTTTCCGTCCCTGTATCGACCTGCACGCCGGCAAAGTGAAGCAA
ATCGTGGGCTCGTCTTTGACAGGGAATGACGCTGCACTCGTGACCAATTT
CGAGGCCAAGATGAGTGCCGAGGATTTTGCCAAGTGGACCTGACAATCGG
CAGTGCCTTAGACATCTTTGGTGGTGCCTTGAGCTACTCGGATGTGGTCG
AGTGGGACAAACGCAATGGCTACATTTAAGAGGACCTCGTGGTCCTTCTC
GGGGACATCAGCCCCTTGCCAGTCACCTACGCAGGCGGCGCCCGGTCGAT
CGAAGACTTGCAGCGCGTGACAGAGCTCGGGAGAGGCAAGCCGAGAGAAC
CTGGCGAAGCTCTCTAAGCACTGCGACGAGTTCCTGGTGCACGGCGTGGA
CGTGGAGGGCCTGAAAGTGGGGATACTGGTGGTGGATCTAAGCTGTCGGC
GGAAAGCGGAGGACGGCCCAGAGGGGCCCTACTACGTGGTGAAGGACAAG
TGGCAAACGTACACGGACTTTCAAATTAAAATGTACCAATCCGACGACCT
CAAAGGGGGGCACGTCATCATGCTGGGCGATGGCTGTGAAGAGGCCGCTC
TTGCCGCCTTGCGTGCGTACCCGGGGGGTTTGCAGATAGGGGGCGGAGTG
ACGCCGGAGAGCGCACAGAGATACGTAGACGCTGGCGCGAGCCATGTGAT
TGTGACGTCTTATTTATTCTCGGGCAAGGAGTTGGATTTTGAGAAATTAA
AGAAGATGGAGGGGGTAGTGGGGAAGGAGAAGCTGATGGTTTTCCGTCCC
TGTATCGACCTGCACGCCGGCAAAGTGAAGCAAATCGTGGGCTCGTCTTT
GACAGGGAATGACGCTGCACTCGTGACCAATTTCGAGGCCAAGATGAGTG
CCGAGGATTTTGCCAAGTGGACCTGACAATCGGCAGTGCCTTAGACATCT
TTGGTGGTGCCTTGAGCTACTCGGATGTGGTCGAGTGGGACAAACGCAAT
GGCTACATTTAAGAGGACCTCGTGGTCCTTCTCGGGGACATCAGCCCCTT
GCCAGTCACCTACGCAGGCGGCGCCCGGTCGATCGAAGACTTGCAGCGCG
TGACAGAGCTCGGGAGAGGCAAGCCGAGAGAACCTGGCGAAGCTCTCTAA
GCACTGCGACGAGTTCCTGGTGCACGGCGTGGACGTGGAGGGCCTGAAAG
TGGGGATACTGGTGGTGGATCTAAGCTGTCGGCGGAAAGCGGAGGACGGC
CCAGAGGGGCCCTACTACGTGGTGAAGGACAAGTGGCAAACGTACACGGA
CTTTCAAATTAAAATGTACCAATCCGACGACCTCAAAGGGGGGCACGTCA
TCATGCTGGGCGATGGCTGTGAAGAGGCCGCTCTTGCCGCCTTGCGTGCG
TACCCGGGGGGTTTGCAGATAGGGGGCGGAGTGACGCCGGAGAGCGCACA
GAGATACGTAGACGCTGGCGCGAGCCATGTGATTGTGACGTCTTATTTAT
TCTCGGGCAAGGAGTTGGATTTTGAGAAATTAAAGAAGATGGAGGGGGTA
GTGGGGAAGGAGAAGCTGATGGTTTTCCGTCCCTGTATCGACCTGCACGC
CGGCAAAGTGAAGCAAATCGTGGGCTCGTCTTTGACAGGGAATGACGCTG
CACTCGTGACCAATTTCGAGGCCAAGATGAGTGCCGAGGATTTTGCCAAG
TGGACCTGACAATCGGCAGTGCCTTAGACATCTTTGGTGGTGCCTTGAGC
TACTCGGATGTGGTCGAGTGGGACAAACGCAATGGCTACATTTAAGAGGA
CCTCGTGGTCCTTCTCGGGGACATCAGCCCCTTGCCAGTCACCTACGCAG
GCGGCGCCCGGTCGATCGAAGACTTGCAGCGCGTGACAGAGCTCGGGAGA
GGCAAGCCGAGAGAACCTGGCGAAGCTCTCTAAGCACTGCGACGAGTTCC
TGGTGCACGGCGTGGACGTGGAGGGCCTGAAAGTGGGGATACTGGTGGTG
GATCTAAGCTGTCGGCGGAAAGCGGAGGACGGCCCAGAGGGGCCCTACTA
CGTGGTGAAGGACAAGTGGCAAACGTACACGGACTTTCAAATTAAAATGT
ACCAATCCGACGACCTCAAAGGGGGGCACGTCATCATGCTGGGCGATGGC
TGTGAAGAGGCCGCTCTTGCCGCCTTGCGTGCGTACCCGGGGGGTTTGCA
GATAGGGGGCGGAGTGACGCCGGAGAGCGCACAGAGATACGTAGACGCTG
GCGCGAGCCATGTGATTGTGACGTCTTATTTATTCTCGGGCAAGGAGTTG
GATTTTGAGAAATTAAAGAAGATGGAGGGGGTAGTGGGGAAGGAGAAGCT
GATGGTTTTCCGTCCCTGTATCGACCTGCACGCCGGCAAAGTGAAGCAAA
TCGTGGGCTCGTCTTTGACAGGGAATGACGCTGCACTCGTGACCAATTTC
GAGGCCAAGATGAGTGCCGAGGATTTTGCCAAGTGGACCTGACAATCGGC
AGTGCCTTAGACATCTTTGGTGGTGCCTTGAGCTACTCGGATGTGGTCGA
GTGGGACAAACGCAATGGCTACATTTAAGAGGACCTCGTGGTCCTTCTCG
GGGACATCAGCCCCTTGCCAGTCACCTACGCAGGCGGCGCCCGGTCGATC
GAAGACTTGCAGCGCGTGACAGAGCTCGGGAGAGGCAAGCCGAGAGAACC
TGGCGAAGCTCTCTAAGCACTGCGACGAGTTCCTGGTGCACGGCGTGGAC
GTGGAGGGCCTGAAAGTGGGGATACTGGTGGTGGATCTAAGCTGTCGGCG
GAAAGCGGAGGACGGCCCAGAGGGGCCCTACTACGTGGTGAAGGACAAGT
GGCAAACGTACACGGACTTTCAAATTAAAATGTACCAATCCGACGACCTC
AAAGGGGGGCACGTCATCATGCTGGGCGATGGCTGTGAAGAGGCCGCTCT
TGCCGCCTTGCGTGCGTACCCGGGGGGTTTGCAGATAGGGGGCGGAGTGA
CGCCGGAGAGCGCACAGAGATACGTAGACGCTGGCGCGAGCCATGTGATT
GTGACGTCTTATTTATTCTCGGGCAAGGAGTTGGATTTTGAGAAATTAAA
GAAGATGGAGGGGGTAGTGGGGAAGGAGAAGCTGATGGTTTTCCGTCCCT
GTATCGACCTGCACGCCGGCAAAGTGAAGCAAATCGTGGGCTCGTCTTTG
ACAGGGAATGACGCTGCACTCGTGACCAATTTCGAGGCCAAGATGAGTGC
CGAGGATTTTGCCAAGTGGACCTGACAATCGGCAGTGCCTTAGACATCTT
TGGTGGTGCCTTGAGCTACTCGGATGTGGTCGAGTGGGACAAACGCAATG
GCTACATTTAAGAGGACCTCGTGGTCCTTCTCGGGGACATCAGCCCCTTG
CCAGTCACCTACGCAGGCGGCGCCCGGTCGATCGAAGACTTGCAGCGCGT
GACAGAGCTCGGGAGAGGCAAGCCGAGAGAACCTGGCGAAGCTCTCTAAG
CACTGCGACGAGTTCCTGGTGCACGGCGTGGACGTGGAGGGCCTGAAAGT
GGGGATACTGGTGGTGGATCTAAGCTGTCGGCGGAAAGCGGAGGACGGCC
CAGAGGGGCCCTACTACGTGGTGAAGGACAAGTGGCAAACGTACACGGAC
TTTCAAATTAAAATGTACCAATCCGACGACCTCAAAGGGGGGCACGTCAT
CATGCTGGGCGATGGCTGTGAAGAGGCCGCTCTTGCCGCCTTGCGTGCGT
ACCCGGGGGGTTTGCAGATAGGGGGCGGAGTGACGCCGGAGAGCGCACAG
AGATACGTAGACGCTGGCGCGAGCCATGTGATTGTGACGTCTTATTTATT
CTCGGGCAAGGAGTTGGATTTTGAGAAATTAAAGAAGATGGAGGGGGTAG
TGGGGAAGGAGAAGCTGATGGTTTTCCGTCCCTGTATCGACCTGCACGCC
GGCAAAGTGAAGCAAATCGTGGGCTCGTCTTTGACAGGGAATGACGCTGC
ACTCGTGACCAATTTCGAGGCCAAGATGAGTGCCGAGGATTTTGCCAA back to top
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