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Properties
| Property Name | Value |
|---|
| TranscriptId | 595785 |
| Track | FilteredModels2 |
| ProteinId | 595699 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:343036..345125 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7126 ID=mRNA_7126|Name=jgi.p|Nanoce1779_2|595699|organism=Nannochloropsis oceanica|type=mRNA|length=1818bp
ACAGGTTCCGGCGACCCGAGCCACTACTGGTGGCACCCCCCGTCCGTTCA
TGCATCTGCGTTTCCCTCGCACTTCTCCGCTCAAACTGACCTCAGACTCC
CAACTAGATAATAGAGCTTTCAAGCTTCAGTCGCTGCGCGCGTGAGGGAT
GCCCGCTTCAGGAGCCTTAAGCAAAACATTGGAGAAGGCCAAAGCCGACA
TGTCTGCATCCTCCATGGCCGTGGGCTTGGCAGCTGGCATCTTACTGGCG
GTGGCCGTGCTCTACCCCAAAACTGGGGCCCCAAAGGCCGACGCCGGCAA
GGCCAAGCATGACTCTGACTTGTCGTATCCCGCCACGCTGCCCACGAATG
AAAAAGAAGCTTTCAATGAGATCTGCGACCAGCTTACGGAGGAGATTTTG
TCAGAATTGCAGGGCACCTACGACATGCCTAAGGAGGCGATAGAGTGGGT
TAAAAAGATGATCGAATATAATGTCAAAGGCGGGAAGCTCAACCGGGGCC
TAACTGTGGTTTCTGTCAAGCGCACCATCGACGCCGCCAAGGGAAATGCC
TTGTCCACCCGGGAGTTTGCACGTGCGGCGGTATTGGGGTGGTGCATCGA
GTGGCTGCAGGCCTTTTTTCTGGTGGCAGACGACGTCATGGACGATTCCG
TGACTCGGCGGGGCCAGCCCTGCTGGTTCCGCCTTCCCCAGGTAAAGCTA
ATCGCGGTGAACGACTCCTTTATTCTCGAGTCCAACGTATTCCAGATCCT
GAGACGGCACTTTGGCCATGAGGCGTTCTACACCCCACTCTTCGATCTGT
TCCGCGAGGTGACGCTGCAGACGGAGCTGGGCCAACTGCTGGATCTGACT
TCGCAGCCCATGGATGGCCAGATTGACCTGCACCGCTTTACCCTGCAGCG
ATACCAACTTATCGTCAAGTACAAAACGGCATTTTACACCTTTTATCTGC
CGATCGCCTGCGGCCTTATTCTCTCGGGCATGGGTGAGCCTGGCGCACTG
GCCGCGGCGCGGCGAGTGTGCGTCTTGATGGGCGAGTATTTCCAGGTGCA
GGACGACGTTCTCGACTGCTTCGGCGACCCCAAAGTCATCGGCAAGGTGG
GCACGGACATCCAGGACAACAAGTGCTCCTGGCTCGTGGTGCAGGCCCTC
GACAAGGCCACGCCGGCCCAGCGCAAGATCCTCGAGACACACTACGGCAA
GCACGAGGAGGCCTCGGTGGCGGCCGTCAAGGCGCTCTACCGGGACATGG
GACTGGAGATGCTCTTCAAAAAGTACGAGGAGCAGTCGTATGCGGCTATC
CAGGCCGAGCTTGACGCCCTCCCTGTCAACATACCCCGTCCTGTGTTTGA
GATCTTGCTCAAGAAAATCTACAAGCGCTCCAAGTAGAGAAGGTAGGGAG
AGATAGGGTAGGATGGAGGGGAGTGTAGTAGCCCCTGGAGGCAAGGGAGA
TTGAAGAGCTGGATATGTGTTTGTTTGCTTTCTTCTCCTGCGCCTGATTG
ATTTCTTTTGAAATGATTTAGTACATTGATAGCGAAGTTGCGTGTATCTG
CATGTAAGCTTGTTTTGTTTCCCTTTTCAATTAAAGAAAAAAGCGCCGTG
TCGTCATCAGAGGAACGTTTTAATTGATGTGACTGATACTGATCCCATCC
ACGCAAGGAAAGGAAGGAAATACATACATGAGTGACCATGGATATGCCCT
GTCAATAAATGAATAACTACTACAGAATCCACTCATTTTTTTTCGGACAC
TCACATCGGACAGCTACCTTTTGATCTTGTTTCCTTTTTGCATATTATTT
GTCATCATATGCTATGTA back to topprotein sequence of jgi.p|Nanoce1779_2|595699 >mRNA_7126-protein ID=mRNA_7126-protein|Name=jgi.p|Nanoce1779_2|595699|organism=Nannochloropsis oceanica|type=polypeptide|length=413bp
MPASGALSKTLEKAKADMSASSMAVGLAAGILLAVAVLYPKTGAPKADAG
KAKHDSDLSYPATLPTNEKEAFNEICDQLTEEILSELQGTYDMPKEAIEW
VKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGNALSTREFARAAVLGWCI
EWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQI
LRRHFGHEAFYTPLFDLFREVTLQTELGQLLDLTSQPMDGQIDLHRFTLQ
RYQLIVKYKTAFYTFYLPIACGLILSGMGEPGALAAARRVCVLMGEYFQV
QDDVLDCFGDPKVIGKVGTDIQDNKCSWLVVQALDKATPAQRKILETHYG
KHEEASVAAVKALYRDMGLEMLFKKYEEQSYAAIQAELDALPVNIPRPVF
EILLKKIYKRSK* back to topmRNA from alignment at scaffold_16:343036..345125- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7126 ID=mRNA_7126|Name=jgi.p|Nanoce1779_2|595699|organism=Nannochloropsis oceanica|type=mRNA|length=2090bp|location=Sequence derived from alignment at scaffold_16:343036..345125- (Nannochloropsis oceanica)
ACAGGTTCCGGCGACCCGAGCCACTACTGGTGGCACCCCCCGTCCGTTCA
TGCATCTGCGTTTCCCTCGCACTTCTCCGCTCAAACTGACCTCAGACTCC
CAACTAGATAATAGAGCTTTCAAGCTTCAGTCGCTGCGCGCGTGAGGGAT
GCCCGCTTCAGGAGCCTTAAGGTGAGTAAGTCATGGTATACTGTTATCGT
GTGAGAGATGTCTGTATGGAGACAAGACGCGGAGGAAGATGAGGAACCAA
TAATCAAGAAGGTAATGCTCACACCCACCTTCCCACCCACATACACACCT
ACACACACAAACCCATCCCTCTACTTGCATACTTTCCAACAGCAAAACAT
TGGAGAAGGCCAAAGGTCAGTGTGATATGTGGGGTTGTTCCGACGTCCAT
TTCTTCCTCGTAACGTCCTTTTCCCCTCCTCCGTTGCACCAATATCCCTT
CCGCACAACGACACAGCCGACATGTCTGCATCCTCCATGGCCGTGGGCTT
GGCAGCTGGCATCTTACTGGCGGTGGCCGTGCTCTACCCCAAAACTGGGG
CCCCAAAGGCCGACGCCGGCAAGGCCAAGCATGACTCTGACTTGTCGTAT
CCCGCCACGCTGCCCACGAATGAAAAAGAAGCTTTCAATGAGATCTGCGA
CCAGCTTACGGAGGAGATTTTGTCAGAATTGCAGGGCACCTACGACATGC
CTAAGGAGGCGATAGAGTGGGTTAAAAAGATGATCGAATATAATGTCAAA
GGCGGGAAGCTCAACCGGGGCCTAACTGTGGTTTCTGTCAAGCGCACCAT
CGACGCCGCCAAGGGAAATGCCTTGTCCACCCGGGAGTTTGCACGTGCGG
CGGTATTGGGGTGGTGCATCGAGTGGCTGCAGGCCTTTTTTCTGGTGGCA
GACGACGTCATGGACGATTCCGTGACTCGGCGGGGCCAGCCCTGCTGGTT
CCGCCTTCCCCAGGTAAAGCTAATCGCGGTGAACGACTCCTTTATTCTCG
AGTCCAACGTATTCCAGATCCTGAGACGGCACTTTGGCCATGAGGCGTTC
TACACCCCACTCTTCGATCTGTTCCGCGAGGTGACGCTGCAGACGGAGCT
GGGCCAACTGCTGGATCTGACTTCGCAGCCCATGGATGGCCAGATTGACC
TGCACCGCTTTACCCTGCAGCGATACCAACTTATCGTCAAGTACAAAACG
GCATTTTACACCTTTTATCTGCCGATCGCCTGCGGCCTTATTCTCTCGGG
CATGGGTGAGCCTGGCGCACTGGCCGCGGCGCGGCGAGTGTGCGTCTTGA
TGGGCGAGTATTTCCAGGTGCAGGACGACGTTCTCGACTGCTTCGGCGAC
CCCAAAGTCATCGGCAAGGTGGGCACGGACATCCAGGACAACAAGTGCTC
CTGGCTCGTGGTGCAGGCCCTCGACAAGGCCACGCCGGCCCAGCGCAAGA
TCCTCGAGACACACTACGGCAAGCACGAGGAGGCCTCGGTGGCGGCCGTC
AAGGCGCTCTACCGGGACATGGGACTGGAGATGCTCTTCAAAAAGTACGA
GGAGCAGTCGTATGCGGCTATCCAGGCCGAGCTTGACGCCCTCCCTGTCA
ACATACCCCGTCCTGTGTTTGAGATCTTGCTCAAGAAAATCTACAAGCGC
TCCAAGTAGAGAAGGTAGGGAGAGATAGGGTAGGATGGAGGGGAGTGTAG
TAGCCCCTGGAGGCAAGGGAGATTGAAGAGCTGGATATGTGTTTGTTTGC
TTTCTTCTCCTGCGCCTGATTGATTTCTTTTGAAATGATTTAGTACATTG
ATAGCGAAGTTGCGTGTATCTGCATGTAAGCTTGTTTTGTTTCCCTTTTC
AATTAAAGAAAAAAGCGCCGTGTCGTCATCAGAGGAACGTTTTAATTGAT
GTGACTGATACTGATCCCATCCACGCAAGGAAAGGAAGGAAATACATACA
TGAGTGACCATGGATATGCCCTGTCAATAAATGAATAACTACTACAGAAT
CCACTCATTTTTTTTCGGACACTCACATCGGACAGCTACCTTTTGATCTT
GTTTCCTTTTTGCATATTATTTGTCATCATATGCTATGTA back to topCoding sequence (CDS) from alignment at scaffold_16:343036..345125- >mRNA_7126 ID=mRNA_7126|Name=jgi.p|Nanoce1779_2|595699|organism=Nannochloropsis oceanica|type=CDS|length=3717bp|location=Sequence derived from alignment at scaffold_16:343036..345125- (Nannochloropsis oceanica)
CCGACATGTCTGCATCCTCCATGGCCGTGGGCTTGGCAGCTGGCATCTTA
CTGGCGGTGGCCGTGCTCTACCCCAAAACTGGGGCCCCAAAGGCCGACGC
CGGCAAGGCCAAGCATGACTCTGACTTGTCGTATCCCGCCACGCTGCCCA
CGAATGAAAAAGAAGCTTTCAATGAGATCTGCGACCAGCTTACGGAGGAG
ATTTTGTCAGAATTGCAGGGCACCTACGACATGCCTAAGGAGGCGATAGA
GTGGGTTAAAAAGATGATCGAATATAATGTCAAAGGCGGGAAGCTCAACC
GGGGCCTAACTGTGGTTTCTGTCAAGCGCACCATCGACGCCGCCAAGGGA
AATGCCTTGTCCACCCGGGAGTTTGCACGTGCGGCGGTATTGGGGTGGTG
CATCGAGTGGCTGCAGGCCTTTTTTCTGGTGGCAGACGACGTCATGGACG
ATTCCGTGACTCGGCGGGGCCAGCCCTGCTGGTTCCGCCTTCCCCAGGTA
AAGCTAATCGCGGTGAACGACTCCTTTATTCTCGAGTCCAACGTATTCCA
GATCCTGAGACGGCACTTTGGCCATGAGGCGTTCTACACCCCACTCTTCG
ATCTGTTCCGCGAGGTGACGCTGCAGACGGAGCTGGGCCAACTGCTGGAT
CTGACTTCGCAGCCCATGGATGGCCAGATTGACCTGCACCGCTTTACCCT
GCAGCGATACCAACTTATCGTCAAGTACAAAACGGCATTTTACACCTTTT
ATCTGCCGATCGCCTGCGGCCTTATTCTCTCGGGCATGGGTGAGCCTGGC
GCACTGGCCGCGGCGCGGCGAGTGTGCGTCTTGATGGGCGAGTATTTCCA
GGTGCAGGACGACGTTCTCGACTGCTTCGGCGACCCCAAAGTCATCGGCA
AGGTGGGCACGGACATCCAGGACAACAAGTGCTCCTGGCTCGTGGTGCAG
GCCCTCGACAAGGCCACGCCGGCCCAGCGCAAGATCCTCGAGACACACTA
CGGCAAGCACGAGGAGGCCTCGGTGGCGGCCGTCAAGGCGCTCTACCGGG
ACATGGGACTGGAGATGCTCTTCAAAAAGTACGAGGAGCAGTCGTATGCG
GCTATCCAGGCCGAGCTTGACGCCCTCCCTGTCAACATACCCCGTCCTGT
GTTTGAGATCTTGCTCAAGAAAATCTACAAGCGCTCCAAGTAGCAAAACA
TTGGAGAAGGCCAAAGATGCCCGCTTCAGGAGCCTTAAGCCGACATGTCT
GCATCCTCCATGGCCGTGGGCTTGGCAGCTGGCATCTTACTGGCGGTGGC
CGTGCTCTACCCCAAAACTGGGGCCCCAAAGGCCGACGCCGGCAAGGCCA
AGCATGACTCTGACTTGTCGTATCCCGCCACGCTGCCCACGAATGAAAAA
GAAGCTTTCAATGAGATCTGCGACCAGCTTACGGAGGAGATTTTGTCAGA
ATTGCAGGGCACCTACGACATGCCTAAGGAGGCGATAGAGTGGGTTAAAA
AGATGATCGAATATAATGTCAAAGGCGGGAAGCTCAACCGGGGCCTAACT
GTGGTTTCTGTCAAGCGCACCATCGACGCCGCCAAGGGAAATGCCTTGTC
CACCCGGGAGTTTGCACGTGCGGCGGTATTGGGGTGGTGCATCGAGTGGC
TGCAGGCCTTTTTTCTGGTGGCAGACGACGTCATGGACGATTCCGTGACT
CGGCGGGGCCAGCCCTGCTGGTTCCGCCTTCCCCAGGTAAAGCTAATCGC
GGTGAACGACTCCTTTATTCTCGAGTCCAACGTATTCCAGATCCTGAGAC
GGCACTTTGGCCATGAGGCGTTCTACACCCCACTCTTCGATCTGTTCCGC
GAGGTGACGCTGCAGACGGAGCTGGGCCAACTGCTGGATCTGACTTCGCA
GCCCATGGATGGCCAGATTGACCTGCACCGCTTTACCCTGCAGCGATACC
AACTTATCGTCAAGTACAAAACGGCATTTTACACCTTTTATCTGCCGATC
GCCTGCGGCCTTATTCTCTCGGGCATGGGTGAGCCTGGCGCACTGGCCGC
GGCGCGGCGAGTGTGCGTCTTGATGGGCGAGTATTTCCAGGTGCAGGACG
ACGTTCTCGACTGCTTCGGCGACCCCAAAGTCATCGGCAAGGTGGGCACG
GACATCCAGGACAACAAGTGCTCCTGGCTCGTGGTGCAGGCCCTCGACAA
GGCCACGCCGGCCCAGCGCAAGATCCTCGAGACACACTACGGCAAGCACG
AGGAGGCCTCGGTGGCGGCCGTCAAGGCGCTCTACCGGGACATGGGACTG
GAGATGCTCTTCAAAAAGTACGAGGAGCAGTCGTATGCGGCTATCCAGGC
CGAGCTTGACGCCCTCCCTGTCAACATACCCCGTCCTGTGTTTGAGATCT
TGCTCAAGAAAATCTACAAGCGCTCCAAGTAGCAAAACATTGGAGAAGGC
CAAAGATGCCCGCTTCAGGAGCCTTAAGCCGACATGTCTGCATCCTCCAT
GGCCGTGGGCTTGGCAGCTGGCATCTTACTGGCGGTGGCCGTGCTCTACC
CCAAAACTGGGGCCCCAAAGGCCGACGCCGGCAAGGCCAAGCATGACTCT
GACTTGTCGTATCCCGCCACGCTGCCCACGAATGAAAAAGAAGCTTTCAA
TGAGATCTGCGACCAGCTTACGGAGGAGATTTTGTCAGAATTGCAGGGCA
CCTACGACATGCCTAAGGAGGCGATAGAGTGGGTTAAAAAGATGATCGAA
TATAATGTCAAAGGCGGGAAGCTCAACCGGGGCCTAACTGTGGTTTCTGT
CAAGCGCACCATCGACGCCGCCAAGGGAAATGCCTTGTCCACCCGGGAGT
TTGCACGTGCGGCGGTATTGGGGTGGTGCATCGAGTGGCTGCAGGCCTTT
TTTCTGGTGGCAGACGACGTCATGGACGATTCCGTGACTCGGCGGGGCCA
GCCCTGCTGGTTCCGCCTTCCCCAGGTAAAGCTAATCGCGGTGAACGACT
CCTTTATTCTCGAGTCCAACGTATTCCAGATCCTGAGACGGCACTTTGGC
CATGAGGCGTTCTACACCCCACTCTTCGATCTGTTCCGCGAGGTGACGCT
GCAGACGGAGCTGGGCCAACTGCTGGATCTGACTTCGCAGCCCATGGATG
GCCAGATTGACCTGCACCGCTTTACCCTGCAGCGATACCAACTTATCGTC
AAGTACAAAACGGCATTTTACACCTTTTATCTGCCGATCGCCTGCGGCCT
TATTCTCTCGGGCATGGGTGAGCCTGGCGCACTGGCCGCGGCGCGGCGAG
TGTGCGTCTTGATGGGCGAGTATTTCCAGGTGCAGGACGACGTTCTCGAC
TGCTTCGGCGACCCCAAAGTCATCGGCAAGGTGGGCACGGACATCCAGGA
CAACAAGTGCTCCTGGCTCGTGGTGCAGGCCCTCGACAAGGCCACGCCGG
CCCAGCGCAAGATCCTCGAGACACACTACGGCAAGCACGAGGAGGCCTCG
GTGGCGGCCGTCAAGGCGCTCTACCGGGACATGGGACTGGAGATGCTCTT
CAAAAAGTACGAGGAGCAGTCGTATGCGGCTATCCAGGCCGAGCTTGACG
CCCTCCCTGTCAACATACCCCGTCCTGTGTTTGAGATCTTGCTCAAGAAA
ATCTACAAGCGCTCCAAGTAGCAAAACATTGGAGAAGGCCAAAGATGCCC
GCTTCAGGAGCCTTAAG back to top
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