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Properties
| Property Name | Value |
|---|
| TranscriptId | 607202 |
| Track | FilteredModels2 |
| ProteinId | 607116 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_37 | supercontig | scaffold_37:159066..162175 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9766 ID=mRNA_9766|Name=jgi.p|Nanoce1779_2|607116|organism=Nannochloropsis oceanica|type=mRNA|length=1668bp
GGGAAGAAGAGAGGGAGGGAGGGAGAAAGGAAGAGAAGATGATTGGAAAT
GAGACAAGGAGAAGGGAGGGAGGGAGGACGGGAGAGAGGGGGGAGGGAGG
GGTCAAACCTACCTCGAGCACGTCTCCGTCCATGAGGCGGTGTCGGAAGC
GGCCGTCGAAGGAGACCCACGCATGCGACCTCACATCTTTGGGCATGCAC
AGGGAAATGACGGCCGAGTCGGGGAAGATCAAAGGACGGAAGGAGAGGGA
GTGGGGGCAGATGGGGGTGAGGAGCAGGGCTTGGATACCCGGATGTACCA
TGGAGCCGCCGGCGGACATGCTGTAGGCCGTAGAGCCTGTTGGTGTGGCG
ATGATGAGACCGTCGGCTTGGACGGTGGTGACGTACTGGTCGTTACAGAA
ACAGTCGAGGGAGGCCAGGTAGGGGGAGGAGCCTCTTTCCACGACGGCAT
CATTCATCACGGCCAGGTCCATAACGACGCTGCCGTTTCGGATGATTCGA
CAACGGAGACGCATCCTCAGGGTTAAACTCACGTCCTGAGTCAGCACACG
CTCGACAGTGGGGTAGATGTCTTCATACTCGAAGGGGAGGAGGAAGCCGA
GGGAGCCGAGGTTAACGGGAAGGATGATGGGGGCCGATTTTTGGAAGAGC
CAGTTGGCGTGCATCAGGAGGCCGTCGCCACCGAGGGTGATGACCAGATC
TACTTCGTGGTGGCTGTGGTTGCGGGCGCTCTGGAGCTCGACCACGTGGA
TGTCGAAGGATTCGAGGAGGTCGTGTTTGACTTGTCGCTCGACCAGCACC
CGCACGCCTTCGCGGGCTTGCAGAAAGTTTGTGATATCGGCCACGCGCTG
AAGGATGTCGCAGGAGCCTCGCTTCATGAGGAGAAGCACGTTCCGGGGCT
CGTCGAGCCAACGGAGGGAGGTCTGCTCTGGCAGCCCTTTTTTGGCCCCC
CCTAAGATCTGCCCGTCCTCAACTACGTCGATGCTCGTCACCGTCTGCCA
CCGCTTGTGCAACTCAAACCGTGCCCGTCTTGGATGCGGTTCCCTGCCTT
TTGCAACAACCGTCTCTCCAAGCGATGCCTCGCTATTCATCTCCTCGTCC
TCCCGGGTATCAGGTGCATCCTTCCCTCCTTCCTTCTCCTCCTCCTCCTC
CTTCTCCTCCTGTCCTTCTGCCACCAGCGGGGGCCAAGGGCGAGGAGGGT
CGGGTCTCCTTCCCCATCCTTCGTCTTTTTCACCAACCTCTTTTCCTTCG
CGGAAAGCACTGAGGGTAATAGAAGAGGTGCTGCTGCTCCTGCAGCTGCT
GCTGCTGCTGTGTCTTATCCGTGGTGTGGAAGCAGAAAGAGAAGAAGGAG
GCAAATGCCAGGCATGCCGCGTCGGGAAGAAGCTTAACAGGACGAGAGAG
AAGAGGAGTAGAGGTTTGGACAGGTTGCGACGAGCATATAGCAGCCAGCG
TGGGAAAGAAGGGGACGAATCGGGGGTGGGAGACGGGAATTGACACGGCG
AGGGCCAGGAGGGGCAGGACTGTGTTGATGTTACTGCGGGGAGGGGGATG
GTGCCAGCGACAATGGCCTCTGCACCCATGGCTGTCTATGCTGTGGCCGT
CGCCGGTGGCCACTTCCTTGGCAAGCTCTTTATCCCCTCAAAGCAGCTAG
TTTGTTTAGGAGGGATCT back to topprotein sequence of jgi.p|Nanoce1779_2|607116 >mRNA_9766-protein ID=mRNA_9766-protein|Name=jgi.p|Nanoce1779_2|607116|organism=Nannochloropsis oceanica|type=polypeptide|length=213bp
MSQEPRFMRRSTFRGSSSQRREVCSGSPFLAPPKICPSSTTSMLVTVCHR
LCNSNRARLGCGSLPFATTVSPSDASLFISSSSRVSGASFPPSFSSSSSF
SSCPSATSGGQGRGGSGLLPHPSSFSPTSFPSRKALRVIEEVLLLLQLLL
LLCLIRGVEAEREEGGKCQACRVGKKLNRTREKRSRGLDRLRRAYSSQRG
KEGDESGVGDGN* back to topmRNA from alignment at scaffold_37:159066..162175- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9766 ID=mRNA_9766|Name=jgi.p|Nanoce1779_2|607116|organism=Nannochloropsis oceanica|type=mRNA|length=3110bp|location=Sequence derived from alignment at scaffold_37:159066..162175- (Nannochloropsis oceanica)
GGGAAGAAGAGAGGGAGGGAGGGAGAAAGGAAGAGAAGATGATTGGAAAT
GAGACAAGGAGAAGGGAGGGAGGGAGGACGGGAGAGAGGGGGGAGGGAGG
GGTCAAACCTACCTCGAGCACGTCTCCGTCCATGAGGCGGTGTCGGAAGC
GGCCGTCGAAGGAGACCCACGCATGCGACCTCACATCTTTGGGCATGCAC
AGGGAAATGACGGCCGAGTCGGGGAAGATCAAAGGACGGAAGGAGAGGGA
GTGGGGGCAGATGGGGGTGAGGAGCAGGGCTTGGATACCCGGATGTACCA
TGGAGCCGCCGGCGGACATGCTGTAGGCCGTAGAGCCTGGAGGGGGGAAG
GGGGGGAGGGAGGGAAGGCGGTGAGCGGCTGAGGGAGGGAGGGAGGGCGG
GAGAGAGGGAGAACCTACCTGTTGGTGTGGCGATGATGAGACCGTCGGCT
TGGACGGTGGTGACGTACTGGTCGTTACAGAAACAGTCGAGGGAGGCCAG
GTAGGGGGAGGAGCCTTGTGCGACAGAGGTAGGGAGGGAGGGAGGGTGGG
AGGGAGGGAGGGTGTTTAGTGAGTGTGACGAAGAGAGGGCCTGCGAATAG
CACAGGACAGGACAGCAACGAATGGAAAGTCGAGACGAAGGGAGTGAGTG
AGGGGGGGAGTGAGGGAGGGAGGGAAGGAGGGAAGGAGGGAGGGAGGGAG
GAGGGACGTACCTCTTTCCACGACGGCATCATTCATCACGGCCAGGTCCA
TAACGACGCTGCCGTTTCGGATGATTCGACAACGGAGACGCATCCTCAGG
GTTAAACTCACGTCCTGAGTCAGCACACGCTCGACAGTGGGGTAGATGTC
TTCATACTCGAAGGGGAGGAGGAAGCCTGCGGGGGGAGGGAGGGAAGAAG
GGAGGAAGGGAGAGAGGGGGGATCTAAGCAAGACGAGAGGTAGGAGGGAG
GGAGGGGGGGAGGGAGGGAGGGAGGAAGGGAGGGGGGGAGGGGGCATCTA
AGAAAGACGAGAGGTAGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGAGAGGTAGGTAGGTAGGTAGGTAGGTAGAGAGGGAGGGAGGGAAGGAG
GGAAGGAGGGAAGGAGGGAGGTACCGAGGGAGCCGAGGTTAACGGGAAGG
ATGATGGGGGCCGATTTTTGGAAGAGCCAGTTGGCGTGCATCAGGAGGCC
GTCGCCTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAG
GGAGGGAGGGTAAGTAGCAGTCGAGGAAGAGGAGGAGAAGGAGGGAGGGG
ATGAACCACCAGCGAGGAGAAGTCTATCGGCGTGCATTAGCGACCATCGT
CGAGGGAGAGAGGAGGGAGGGGGGGAGGGAGGAGGACCCTACCACCGAGG
GTGATGACCAGATCTACTTCGTGGTGGCTGTGGTTGCGGGCGCTCTGGAG
CTCGACCACGTGGATGTCGAAGGATTCGAGGAGGTCGTGTCTCAAGGGAG
GGAGGGAGGGAGGGAGGGAGGAAAGGAGGGAGGAAAGGAGGGTGAGGTTG
TGTCGAGTTTGGGGTGGGAACATGAAAGGGAGGGACGACACAAGCGTTAG
AACATACACACGACGTGCACACTGAAGGAGGGAGGGAGAGAGGGAGGGAG
GGAGGGAGAGAGGGGGGGAGGGAGAAAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGGATGGCGTTGGCTCTTACTTGA
CTTGTCGCTCGACCAGCACCCGCACGCCTTCGCGGGCTTGCAGAAAGTTT
GTGATATCGGCCACGCGCTGAAGGATGTCGCAGGAGCCTCGCTTCATGAG
GAGAAGCACGTTCCGGGGCTCGTCGAGCCAACGGAGGGAGGTCTGAGGGA
AGGAGTAAGGGAGGGAGGGAAGGAGGGAAGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGATGTAAATAAATTGGCGAAGCAACCCCATGCCGTTCCACGTC
TGGCTTACGGAATGACAAGAATGGAAGGAAGAGAGGAGGGGGGAGGGAGG
GAGGGAAGGAGGGAGGGAGGGAGGGAAGGAGGACGTGCCTGCTCTGGCAG
CCCTTTTTTGGCCCCCCCTAAGATCTGCCCGTCCTCAACTACGTCGATGC
TCGTCACCGTCTGCCACCGCCTGCACGAGGAAAACGTCGAGTGAAAATAG
GAGAGAGGGAGAAACGTGAGTCTTGGTATGTATCGAAGCATCAAATACAC
GTGTATACCTCAAGCTGGTTTTCCTTCTCCTCCCTCCCTCCCTCCCTCCC
TCCCTCGTACTTGTGCAACTCAAACCGTGCCCGTCTTGGATGCGGTTCCC
TGCCTTTTGCAACAACCGTCTCTCCAAGCGATGCCTCGCTATTCATCTCC
TCGTCCTCCCGGGTATCAGGTGCATCCTTCCCTCCTTCCTTCTCCTCCTC
CTCCTCCTTCTCCTCCTGTCCTTCTGCCACCAGCGGGGGCCAAGGGCGAG
GAGGGTCGGGTCTCCTTCCCCATCCTTCGTCTTTTTCACCAACCTCTTTT
CCTTCGCGGAAAGCACTGAGGGTAATAGAAGAGGTGCTGCTGCTCCTGCA
GCTGCTGCTGCTGCTGTGTCTTATCCGTGGTGTGGAAGCAGAAAGAGAAG
AAGGAGGCAAATGCCAGGCATGCCGCGTCTAAGTAGAGAAAGAAGGAGGG
AAGGAACGAAGGAAGGTGTATATGTTTCAATAAAAGCTAATGGTCCGAGT
AGGATGGAAAAAAGGAAGGGGGACTGGGAAAACTAAAGCTGCGACTTGGT
TCGGGCAGGCGTACCGGGAAGAAGCTTAACAGGACGAGAGAGAAGAGGAG
TAGAGGTTTGGACAGGTTGCGACGAGCATATAGCAGCCAGCGTGGGAAAG
AAGGGGACGAATCGGGGGTGGGAGACGGGAATTGACACGGCGAGGGCCAG
GAGGGGCAGGACTGTGTTGATGTTACTGCGGGGAGGGGGATGGTGCCAGC
GACAATGGCCTCTGCACCCATGGCTGTCTATGCTGTGGCCGTCGCCGGTG
GCCACTTCCTTGGCAAGCTCTTTATCCCCTCAAAGCAGCTAGTTTGTTTA
GGAGGGATCT back to topCoding sequence (CDS) from alignment at scaffold_37:159066..162175- >mRNA_9766 ID=mRNA_9766|Name=jgi.p|Nanoce1779_2|607116|organism=Nannochloropsis oceanica|type=CDS|length=2556bp|location=Sequence derived from alignment at scaffold_37:159066..162175- (Nannochloropsis oceanica)
CGGGAAGAAGCTTAACAGGACGAGAGAGAAGAGGAGTAGAGGTTTGGACA
GGTTGCGACGAGCATATAGCAGCCAGCGTGGGAAAGAAGGGGACGAATCG
GGGGTGGGAGACGGGAATTGATTGTGCAACTCAAACCGTGCCCGTCTTGG
ATGCGGTTCCCTGCCTTTTGCAACAACCGTCTCTCCAAGCGATGCCTCGC
TATTCATCTCCTCGTCCTCCCGGGTATCAGGTGCATCCTTCCCTCCTTCC
TTCTCCTCCTCCTCCTCCTTCTCCTCCTGTCCTTCTGCCACCAGCGGGGG
CCAAGGGCGAGGAGGGTCGGGTCTCCTTCCCCATCCTTCGTCTTTTTCAC
CAACCTCTTTTCCTTCGCGGAAAGCACTGAGGGTAATAGAAGAGGTGCTG
CTGCTCCTGCAGCTGCTGCTGCTGCTGTGTCTTATCCGTGGTGTGGAAGC
AGAAAGAGAAGAAGGAGGCAAATGCCAGGCATGCCGCGTCTGCTCTGGCA
GCCCTTTTTTGGCCCCCCCTAAGATCTGCCCGTCCTCAACTACGTCGATG
CTCGTCACCGTCTGCCACCGCATGTCGCAGGAGCCTCGCTTCATGAGGAG
AAGCACGTTCCGGGGCTCGTCGAGCCAACGGAGGGAGGTCGGGAAGAAGC
TTAACAGGACGAGAGAGAAGAGGAGTAGAGGTTTGGACAGGTTGCGACGA
GCATATAGCAGCCAGCGTGGGAAAGAAGGGGACGAATCGGGGGTGGGAGA
CGGGAATTGATTGTGCAACTCAAACCGTGCCCGTCTTGGATGCGGTTCCC
TGCCTTTTGCAACAACCGTCTCTCCAAGCGATGCCTCGCTATTCATCTCC
TCGTCCTCCCGGGTATCAGGTGCATCCTTCCCTCCTTCCTTCTCCTCCTC
CTCCTCCTTCTCCTCCTGTCCTTCTGCCACCAGCGGGGGCCAAGGGCGAG
GAGGGTCGGGTCTCCTTCCCCATCCTTCGTCTTTTTCACCAACCTCTTTT
CCTTCGCGGAAAGCACTGAGGGTAATAGAAGAGGTGCTGCTGCTCCTGCA
GCTGCTGCTGCTGCTGTGTCTTATCCGTGGTGTGGAAGCAGAAAGAGAAG
AAGGAGGCAAATGCCAGGCATGCCGCGTCTGCTCTGGCAGCCCTTTTTTG
GCCCCCCCTAAGATCTGCCCGTCCTCAACTACGTCGATGCTCGTCACCGT
CTGCCACCGCATGTCGCAGGAGCCTCGCTTCATGAGGAGAAGCACGTTCC
GGGGCTCGTCGAGCCAACGGAGGGAGGTCGGGAAGAAGCTTAACAGGACG
AGAGAGAAGAGGAGTAGAGGTTTGGACAGGTTGCGACGAGCATATAGCAG
CCAGCGTGGGAAAGAAGGGGACGAATCGGGGGTGGGAGACGGGAATTGAT
TGTGCAACTCAAACCGTGCCCGTCTTGGATGCGGTTCCCTGCCTTTTGCA
ACAACCGTCTCTCCAAGCGATGCCTCGCTATTCATCTCCTCGTCCTCCCG
GGTATCAGGTGCATCCTTCCCTCCTTCCTTCTCCTCCTCCTCCTCCTTCT
CCTCCTGTCCTTCTGCCACCAGCGGGGGCCAAGGGCGAGGAGGGTCGGGT
CTCCTTCCCCATCCTTCGTCTTTTTCACCAACCTCTTTTCCTTCGCGGAA
AGCACTGAGGGTAATAGAAGAGGTGCTGCTGCTCCTGCAGCTGCTGCTGC
TGCTGTGTCTTATCCGTGGTGTGGAAGCAGAAAGAGAAGAAGGAGGCAAA
TGCCAGGCATGCCGCGTCTGCTCTGGCAGCCCTTTTTTGGCCCCCCCTAA
GATCTGCCCGTCCTCAACTACGTCGATGCTCGTCACCGTCTGCCACCGCA
TGTCGCAGGAGCCTCGCTTCATGAGGAGAAGCACGTTCCGGGGCTCGTCG
AGCCAACGGAGGGAGGTCGGGAAGAAGCTTAACAGGACGAGAGAGAAGAG
GAGTAGAGGTTTGGACAGGTTGCGACGAGCATATAGCAGCCAGCGTGGGA
AAGAAGGGGACGAATCGGGGGTGGGAGACGGGAATTGATTGTGCAACTCA
AACCGTGCCCGTCTTGGATGCGGTTCCCTGCCTTTTGCAACAACCGTCTC
TCCAAGCGATGCCTCGCTATTCATCTCCTCGTCCTCCCGGGTATCAGGTG
CATCCTTCCCTCCTTCCTTCTCCTCCTCCTCCTCCTTCTCCTCCTGTCCT
TCTGCCACCAGCGGGGGCCAAGGGCGAGGAGGGTCGGGTCTCCTTCCCCA
TCCTTCGTCTTTTTCACCAACCTCTTTTCCTTCGCGGAAAGCACTGAGGG
TAATAGAAGAGGTGCTGCTGCTCCTGCAGCTGCTGCTGCTGCTGTGTCTT
ATCCGTGGTGTGGAAGCAGAAAGAGAAGAAGGAGGCAAATGCCAGGCATG
CCGCGTCTGCTCTGGCAGCCCTTTTTTGGCCCCCCCTAAGATCTGCCCGT
CCTCAACTACGTCGATGCTCGTCACCGTCTGCCACCGCATGTCGCAGGAG
CCTCGCTTCATGAGGAGAAGCACGTTCCGGGGCTCGTCGAGCCAACGGAG
GGAGGT back to top
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