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Properties
| Property Name | Value |
|---|
| TranscriptId | 589145 |
| Track | FilteredModels2 |
| ProteinId | 589059 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:547559..549063 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4424 ID=mRNA_4424|Name=jgi.p|Nanoce1779_2|589059|organism=Nannochloropsis oceanica|type=mRNA|length=1505bp
ACAGTATAAAGGGTACGCTGCGGTGGTAGCGACGTTGGCTGGGAGCCAGG
TCTTGCCCCCCTCTTGAGTCCTCCCGGCCCAGCTTGCCCTGCCATCCTTT
ATATACCCCCTGTAGCACTCCGGCCACCATGGGCAAAAGGGGCACTGGAC
TGGGCCGTCGGAAGAGCAGCATTGGAAGCCACTCGCGGAAGGATGAATTT
TCGGGGCAACCGGCAGCGGGGGAGCATAGGAACATTGGAAAGCAGCAACG
GGTATGTCCTTTGCGAATTAGTGTGGAAAGCGTAGACAGCGTGCCCATTC
CCGGCAAGATGTCAGTGCATGGCTCCTGAGAAGCAATTTGATGCATCATC
TCTCTTGTGTCACGCGCATATCTACGACATTTCCTTGACTAAAAAACATA
TCCTATCCTTTCTTGTCCCCAAAACAAAACAAGTCCAAAGGCAAACGCTT
CGGAAAGGACGAGGAGCAGCGTTTCGAGCAGCAAGTCGCCGAGTTGGGTG
CCCGCATCGCCATCATGGCATCGGATGGGAACTGTCTCTTTCGTGCCTTA
GCTGACCAATTAAGGGGACGACCTCAGGATCATGGGGAAATGAGACAGCA
CATTGGTGATTTTATGGAGGAGCATGAGGAGGACTTTGCGCCATTTGTGG
AGGACGATGAGAAGTGGTCCGATTACGTTCCGCGCATGCGGTGCGAGGGA
CAGTGGGGAGGGCAGCAGGAGATATGTGCGGCGAGTCGTTGTTTTCGAAT
CAATGTGGTGATTCATCAATTGGATAACCCCCGCTTTGAGTTTTCTTACA
AGACCACAGCCCAAACAGTTCATTTGTCTTTTCACGGGGACGCGCACTAC
AACAGCGTCCGCGCGATGGACGATCCATGCCGGGAAGGTGAACCTGCGAA
AGCCTTTATGAATCTAACTGCCAAGCCTTTCGCAGCATGTAGCTCCTCCA
CCTCCCCGAACACCTCGCCCTCAACCAGGTCTTCGTCCTCCTCGCATCGA
AGGATCAAGGCGAGCGAAATCCAGCGACCACAAGAATTCGAGTTACAATA
TGGAGAAGAAAATGATAACATGACAGGGATCGAAGGATCGGGTGGTGACA
GTGACGGCCAGGGTAACGAAGAAGATGGCGAGGGGGAAGGCGAAGTGGAC
GAGAGATGGGAAGCGGGCATGATAACCAAAGTGGGGGGTCAATGTCCGTG
TGGGTCGGGAAAGAAGTGGCGCAAATGCTGCCGGAAAGCAGAAAGACAAC
GCGAGCGTTACATGAATGGTGGTTGGGTCGGGTCGCGCACAGGTCAGAAG
CAGTGGCAGTCGCGTCCCCTGCAGCAGCGGCATACCGAAGGTAACGATGG
AAATGACACGGAGAGCACAAGGATGTTGACACAGAAGCTGGCGGCGATCG
CATTGTAAAATTGATAGGTCTGTATGCACAAGTAGCGAATGGAATCGATT
CGACTGTAAAGAATGAACAAGGCGGAATAGGCCTGGAATTCACTCCTAAT
AGAAA back to topprotein sequence of jgi.p|Nanoce1779_2|589059 >mRNA_4424-protein ID=mRNA_4424-protein|Name=jgi.p|Nanoce1779_2|589059|organism=Nannochloropsis oceanica|type=polypeptide|length=298bp
MASDGNCLFRALADQLRGRPQDHGEMRQHIGDFMEEHEEDFAPFVEDDEK
WSDYVPRMRCEGQWGGQQEICAASRCFRINVVIHQLDNPRFEFSYKTTAQ
TVHLSFHGDAHYNSVRAMDDPCREGEPAKAFMNLTAKPFAACSSSTSPNT
SPSTRSSSSSHRRIKASEIQRPQEFELQYGEENDNMTGIEGSGGDSDGQG
NEEDGEGEGEVDERWEAGMITKVGGQCPCGSGKKWRKCCRKAERQRERYM
NGGWVGSRTGQKQWQSRPLQQRHTEGNDGNDTESTRMLTQKLAAIAL* back to topmRNA from alignment at scaffold_10:547559..549063- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4424 ID=mRNA_4424|Name=jgi.p|Nanoce1779_2|589059|organism=Nannochloropsis oceanica|type=mRNA|length=1505bp|location=Sequence derived from alignment at scaffold_10:547559..549063- (Nannochloropsis oceanica)
ACAGTATAAAGGGTACGCTGCGGTGGTAGCGACGTTGGCTGGGAGCCAGG
TCTTGCCCCCCTCTTGAGTCCTCCCGGCCCAGCTTGCCCTGCCATCCTTT
ATATACCCCCTGTAGCACTCCGGCCACCATGGGCAAAAGGGGCACTGGAC
TGGGCCGTCGGAAGAGCAGCATTGGAAGCCACTCGCGGAAGGATGAATTT
TCGGGGCAACCGGCAGCGGGGGAGCATAGGAACATTGGAAAGCAGCAACG
GGTATGTCCTTTGCGAATTAGTGTGGAAAGCGTAGACAGCGTGCCCATTC
CCGGCAAGATGTCAGTGCATGGCTCCTGAGAAGCAATTTGATGCATCATC
TCTCTTGTGTCACGCGCATATCTACGACATTTCCTTGACTAAAAAACATA
TCCTATCCTTTCTTGTCCCCAAAACAAAACAAGTCCAAAGGCAAACGCTT
CGGAAAGGACGAGGAGCAGCGTTTCGAGCAGCAAGTCGCCGAGTTGGGTG
CCCGCATCGCCATCATGGCATCGGATGGGAACTGTCTCTTTCGTGCCTTA
GCTGACCAATTAAGGGGACGACCTCAGGATCATGGGGAAATGAGACAGCA
CATTGGTGATTTTATGGAGGAGCATGAGGAGGACTTTGCGCCATTTGTGG
AGGACGATGAGAAGTGGTCCGATTACGTTCCGCGCATGCGGTGCGAGGGA
CAGTGGGGAGGGCAGCAGGAGATATGTGCGGCGAGTCGTTGTTTTCGAAT
CAATGTGGTGATTCATCAATTGGATAACCCCCGCTTTGAGTTTTCTTACA
AGACCACAGCCCAAACAGTTCATTTGTCTTTTCACGGGGACGCGCACTAC
AACAGCGTCCGCGCGATGGACGATCCATGCCGGGAAGGTGAACCTGCGAA
AGCCTTTATGAATCTAACTGCCAAGCCTTTCGCAGCATGTAGCTCCTCCA
CCTCCCCGAACACCTCGCCCTCAACCAGGTCTTCGTCCTCCTCGCATCGA
AGGATCAAGGCGAGCGAAATCCAGCGACCACAAGAATTCGAGTTACAATA
TGGAGAAGAAAATGATAACATGACAGGGATCGAAGGATCGGGTGGTGACA
GTGACGGCCAGGGTAACGAAGAAGATGGCGAGGGGGAAGGCGAAGTGGAC
GAGAGATGGGAAGCGGGCATGATAACCAAAGTGGGGGGTCAATGTCCGTG
TGGGTCGGGAAAGAAGTGGCGCAAATGCTGCCGGAAAGCAGAAAGACAAC
GCGAGCGTTACATGAATGGTGGTTGGGTCGGGTCGCGCACAGGTCAGAAG
CAGTGGCAGTCGCGTCCCCTGCAGCAGCGGCATACCGAAGGTAACGATGG
AAATGACACGGAGAGCACAAGGATGTTGACACAGAAGCTGGCGGCGATCG
CATTGTAAAATTGATAGGTCTGTATGCACAAGTAGCGAATGGAATCGATT
CGACTGTAAAGAATGAACAAGGCGGAATAGGCCTGGAATTCACTCCTAAT
AGAAA back to topCoding sequence (CDS) from alignment at scaffold_10:547559..549063- >mRNA_4424 ID=mRNA_4424|Name=jgi.p|Nanoce1779_2|589059|organism=Nannochloropsis oceanica|type=CDS|length=894bp|location=Sequence derived from alignment at scaffold_10:547559..549063- (Nannochloropsis oceanica)
ATGGCATCGGATGGGAACTGTCTCTTTCGTGCCTTAGCTGACCAATTAAG
GGGACGACCTCAGGATCATGGGGAAATGAGACAGCACATTGGTGATTTTA
TGGAGGAGCATGAGGAGGACTTTGCGCCATTTGTGGAGGACGATGAGAAG
TGGTCCGATTACGTTCCGCGCATGCGGTGCGAGGGACAGTGGGGAGGGCA
GCAGGAGATATGTGCGGCGAGTCGTTGTTTTCGAATCAATGTGGTGATTC
ATCAATTGGATAACCCCCGCTTTGAGTTTTCTTACAAGACCACAGCCCAA
ACAGTTCATTTGTCTTTTCACGGGGACGCGCACTACAACAGCGTCCGCGC
GATGGACGATCCATGCCGGGAAGGTGAACCTGCGAAAGCCTTTATGAATC
TAACTGCCAAGCCTTTCGCAGCATGTAGCTCCTCCACCTCCCCGAACACC
TCGCCCTCAACCAGGTCTTCGTCCTCCTCGCATCGAAGGATCAAGGCGAG
CGAAATCCAGCGACCACAAGAATTCGAGTTACAATATGGAGAAGAAAATG
ATAACATGACAGGGATCGAAGGATCGGGTGGTGACAGTGACGGCCAGGGT
AACGAAGAAGATGGCGAGGGGGAAGGCGAAGTGGACGAGAGATGGGAAGC
GGGCATGATAACCAAAGTGGGGGGTCAATGTCCGTGTGGGTCGGGAAAGA
AGTGGCGCAAATGCTGCCGGAAAGCAGAAAGACAACGCGAGCGTTACATG
AATGGTGGTTGGGTCGGGTCGCGCACAGGTCAGAAGCAGTGGCAGTCGCG
TCCCCTGCAGCAGCGGCATACCGAAGGTAACGATGGAAATGACACGGAGA
GCACAAGGATGTTGACACAGAAGCTGGCGGCGATCGCATTGTAA back to top
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