jgi.p|Nanoce1779_2|592454, mRNA_5417 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|592454
Unique Name	mRNA_5417
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5466
Alignment location	scaffold_13:379824..385289 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	592540
Track	FilteredModels2
ProteinId	592454

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_13	supercontig	scaffold_13:379824..385289 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|592454	gene_5417	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|592454	mRNA_5417-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_5417	CDS_5417	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_13:379824..385289-
coding sequence from alignment at scaffold_13:379824..385289-

mRNA sequence

>mRNA_5417 ID=mRNA_5417|Name=jgi.p|Nanoce1779_2|592454|organism=Nannochloropsis oceanica|type=mRNA|length=5466bp
CAGGTTGCGCTGGCCGTCACCATGGTCGAGCCCATCAATTTGTGTCTGGG
GTACGAACAGCGCGTGTTGGATTCCTTGACGCGACCTTTCATCTTGCCCG
TCACACTCATCACGGGTTTCCTCGGCTCAGGGAAGACAACCCTGCTGCGC
AGCCTCCTAGCGCAAAAGCAGAACCTTCGTATCGCCACTCTGGTCAACGA
CCTCGGAGAATTCAACCACGACGTGCAGTTGTTGGAGCTGGTTACGACTT
CCTCCCTCAAGCCCATGCATCACCCTCTCTCCCACCAGCCTGCCTCAGAT
CGCGTAATCGACCTGCACGGCAACTGTCTCTGCTGCTCAAATCTCCAGCA
AGACATGCGACAGAATGTATGGGAATGCTTGCAAACGCCGGACGGAGAAG
CCCGGGCTGTGGATTACCTGGTGATTGAAACGAGTGGTGTCACTGACCCG
GAGACCCTTATTCGCGCCTTGGACGAGAAATTCGGAAAGATGACTCGCGC
GCGCCTGGACAGTGTCGTGACTGTGGTGGATGCGGATGTATTGTACTCCG
AGCTGACTTCGTCTATGAATTGTGCGACAAAAGCCGCTCCTGATGATGAT
ATTTCGGTGGTGGGAAGAGTAGGAGTATCTGCTCCACCACTTATGTCCAC
CGCACGGCGACACCAACTCGAATGCGCCGATATCATTCTCCTCAACAAGA
TCGATCTCCTACAAGACTCTAGCCAACTAGATATTGTCGAAGCATGCTTG
CAGACACTCAACCCACTTGCTCGTATTCATCGCACGCGCTATGCAGAGGT
CCCTTTGCCCTGTGTCCTCGACGTGGAGCTCCCAGATGTTGGGATAGGCC
AGATGACACACGAGACGGGCACTGCGAACTTCGCCACCCGCAATGCCTCT
ACACTTCGATCTCAGGCCTCGCGCAACGTAACCATCAGAAGGAAGGCGAA
TTGTTTGCTGACAGGATCCACAGCTGCCTGTGCTGCTGATGCTCCGGCTT
TGACGGACAAGAACCCGATGGCTACCCACCTCATCACTGATGGCCTCTCT
GCTCTTACGTTTGAAAGCACCTGTCCATTCCTCCTGTACAAGCTCCAACA
TTTCTTCTCTCATGTTTTCCCTGCTGAGGCCGTGGTTCGCTGCAAAGGGT
TTATGCACGTCAGGGACCTGCCCGGGAGGCGCGTGGCTCTAAGCATGAGC
GGGCGTCGGCGTTTTCACGTCTCGGACGAAGGTCCATGGCAGTCGGCCCC
GAAGACGCAACTGGTCTTTATCGGCCACGAGCCCGGCTTTGATAAAGCAG
TGGTCGAGATTGCATTGACAGAAGCTTGTGCAGGTTGGGATGGGAACGTG
GAGAAAGGAGGAAATGATGATGCCTCAGCCTCAGTTCAATTGGCGGCCAA
AGTACGGGCCCTCGTCGCCCAGGATGAACGGATGGAATTGGTGGACCTCC
ACACACTCCTCGCACCTCTACTGTTCCCGCGTATGCGAGACAAGGCCGAG
GAGTCTATGTCCAGTCTGCCCGTGTGGGCGAACTGTTTGGTGGCATTTCG
CTTGACCGGGGCGCCGTCCTTGGGCGTGACATCGGAGCACCTACGAATGA
CACACGGAGTGGATCTAAATGCAATGAGTCGGGCCTTGCAAGCGAAGGTT
AATTTGGCCGGTGTGCTAGAAATGCCACTCCTACATACGTTGCCATTCGG
GGGGGGGGAAGAGGACGTGGCCTTGTGTTTTGTTGTGAAGGATGGGGAGG
AAGCGGAGGGACGAGGGGAAACGTACTATACCAAGGCGTGGGAGTGGATG
GTGTCAGCGGCGGCCAACACTGTGACTTCTCGCTTCTTGGGTCACTTGAA
GTTGTGCAAGTGCGGCCACTAAATTGTACAAATACCGCACATTATAACAG
AATGAAAGAAAACTTGTTGAACTATGTATCGGGGGACCATGTGAAGTCCG
CTCGCCAAACCATAAGCTCGCCGAGAATTGAAAAGTCATATGGACAACAC
ACACTTTGCATGCACCAACAAAGCCTACGCCAAGCCTATACCAGCCTTGT
AATTGATGAGATGGTTAAGGACGAGTATTCAGACTTGTTATTAGCCCATT
AGACAGATGCATTCTAATGCTGCATCATCATCCAACCCCTGGTCGCTCCT
CCACAGGCAACTCACTTCCGATACAACCACTACACCACACATCCAGCCAC
CCACATCCACATCCACTTCCGTAACGATGGCCACGGAGTCAGACCCGTAC
GACTTCGATGCTCCCCAGTATTTTGACTTCGTCCGTGGGGAGAGCGGCGG
CCCTACCAGCATGCAGGGTCCTCCCCTTTCCATGCCCGCGGCGGCCGCAC
TTCCAACCTCTCCCGATGTCGTGCGCGCCGAGGTCACATCCCGGGACCCC
TGGGACTTCGATGCACCCAACTGGACCGACTTAAGTACCGTTACACCTGC
CCCGTCCTATTCGTTATCGTCCTTGTCCTCGGCGTCACCCATTACCCGTG
TCAGCAGGAGCAGTACCAGCAGCTCCAACCAGCTATCTCAACAGCCACCC
GCGGCTGCCGCGCTCGTGGCGCCCACCCCTTCCACTCCAGCACCAGACCC
TCATAAGCTCCACCAAGGGTTCGGCAAACAGTCTTTCTGTCCAGCTGCCG
GTACCCCTGCTGCTCCGGCTTCTGCAACGACAACGTCAATCCTCCCCAAG
ACTCCCGGGCCCATGGCCCGCAATGGCCCCAGCAGCCCTGCCTCATCTAA
CTCCTCCTCGCCGAGCAGTATTACAAACACTCCTATTGTTCCCCAATGTC
TTAGCACCACTCTTCCGACCACCACCACTGCTGCCACCGCAGCTGCGTCT
ATACACACCTTAATGTCAGCCTCGACGCGTATGCGATCCCCCGAACAAAA
TTTACCGGCGTCGCCCAAATATTCTGCCACTCCTGCAGCCACCGTCCGCA
AGCCTACCACGCCTGTCGGACGCATACCCTCCCCCACCCTTACTCCTTCC
CGTCGTCCAGCCTCACCCGCTGCAGTGGCAGCACCGATCCCTGCTCCCCT
CCCCACAACAGCGGTAGCAGCAGCAGGAGCAGCAGATCGTTCCTTTACGA
ATCGCCCCCGCAAAGAACCCATGGGTCATGCTATTCCCCAACAACACTCC
TACCTCGCTCAAACGTCAGCTACCATCGGTCGCCGCGTTGCCGTCAACAC
CATGGCCTCCTTCCTCCGTCCCACCCTCGCTTCGTGGGGTCGTAATCAGA
AGGACGCCACCACCAACAGTTCTAGCAGCAGCAGCGGCAGCATTATTGAG
AGAAGAAGCAGTGGTCCTACTCTTGTAAATGGACGTCCGTCCAGCAGCAG
CAGCAGCGGGCCTGTGCGGGCCATTGTCACGGGGAGAGGAGGGAACACCA
GCACCAGCACCAGCATCAGCAGGAGAAGTACAAGCAACAGCAGCAGCAGT
AGTAGAACCAACCCCAAAGAATCCACGGAAGAACGATCCTTGCGAATGGG
CATAGAAGCCAGAGAACGTTTAAAGCAACAAGTGCGTGCTAACCGCCTCG
CAGCCGAGCGGAATAAGATGGTGGGCGGTACAGCAGGCTCGGCGCCACTT
CGGTCTACCAAAAGTTTGACCATCCCACAATCTCCCCAGCTCCGTCTGAG
CGCCCGCCACGGTGAGAAGCACCTCAGTGCTAGCAGCATGGGCCAGACCA
AAGATCCCAGCATCGAGATCTACCACAAGCCCCGAGCTCTTTCACCCTCC
ACCTTCGGTAGCAGCAGCAACAGCAGCGGTGGTAATGGTTACAAGGGGCC
TAAACCTCTCACCATTCCTGTAGCCCCCTCCTTCAAGACCGATACTCGAG
CCCTTGCCCGTCGTGCCTCCCCCACCTACAACCAAAACAGTCTCGGCAGC
AGCAGCAGTCAAGCAGAAAATTTCTCCAACAGCCACCCCACTTCCTCCCT
TCGAATCAATAGTAGCAGCAGCAGCTGTGGTGGGATGGGCCTGCGCGAGT
ATGCACCAAAGTTTCCCTCTACCCGCACCTTGACCATCCCCCACACCCCC
AATCTTTCTACTAAAACCCGTGCTGCCGTCCGGAAAGGTTCCACAGGAGG
CGTAGGAGGGACGGAGGGACGGAGGGAGGACCAGCAAGAATGCAGGCAGC
AATTTAAGGCTCGGCCATTGGATAGGCGTATATTGGAGTCAACAGGGGAG
ATGGGTGTGCCTAAGGTGGCAAAGGGAGGGGTGACTCAGCCACAGCCTTT
CCATTTTTCGACCGATTCTAGACTACGCGTGCGGGCTGCTCTAGGCTCGT
CGGATTCGGCGGGGGAGCATGAGCAGCACCAGCAGCGTCGTCATCATCAG
GAAGGGAGATTGTCGGCGCCGAGGCCTTTTCAGCTGGCAACAGAGCAACG
GGGGCAACTGCACAATAGGGCATTTGAGGCTCGGATGACGCAAGACCGAG
AGGCAGAGAAGGCCGCGCGGGAGGTCCACGCCCACCCCGTCCCTCACTTC
CACCAGCAGCAGGCTCACGTCCAGCCCCAGCCCAGCACCCGACTTTTGAC
TAAATTTGAAGAGTTCCATCTCTCTTCCAACCACCGACACGAAGATGCTC
AAGGCATGTGGCAGAGGGATGTGGAGCGGTTGACGGATGAAGAGCGGAAG
CAGGTCCAGGGATCCGGTGCTCGTCGTTTCCCTGTCATGACGTTTCAACG
CGGCTTGGAGACTAAGCTATCCGAGCGAGAGCCGCTCTTCCCTTACAGTC
TCAACCTCAGTACCTCTGCTCGTGCGGGAGAGAGGAAGGCGTTTGCAGCC
GACAAGCAGGTCCGGAACGAGGAGGCCCACTTGGAGAAAGAAGCACAGCG
GAGGGCGAAGCAGAGGGTGGAGCAGGAGAAGATTCGGCATTTGCGCACGA
CGCCTGTAGTAGATTAGGGGGGGCTGAAATTTGTATCGAAGCCGATTCAA
CATAGCAGCCAACCGTTAGCATCTTATCCGTCGACGCGGAAGCTTACTGT
CCCCATTTCCCCGCAGTTCAAAACAACAGAGCGCTCGCACATGCGGCCAC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCGAGTAAAAAGTA
AAGGGAAGAAACGTGGAGACGGAAGATGAGAATGTAAGATTGGAGTGTAG
ACGAACGAGCATTACGACGGTTGGAGCTTTCTCCATGTGTGTATACGATG
CTGATGGTGAAGGAGGGGGGAGGGATGACTTGGGGACTGCAAACGAATTT
CATACCCTCCATCGCCTAGATGATAGAAGTTAAACAGTATGACGACGATC
CGCACTCTCACATGTCGGTGTGCCGTCGTAATAAGAGATAAAGAAAAAGA
AAGGAACTGGGTGTGTTGTGTGGGAGAAAGGGATGGAAAGGATCATAAGA
AAATGTTTCTATCCTACCTTTTCAAAAAGAAACGAAATAGAAATGGAAAC
AACGACAATGGAGGAC

protein sequence of jgi.p|Nanoce1779_2|592454

>mRNA_5417-protein ID=mRNA_5417-protein|Name=jgi.p|Nanoce1779_2|592454|organism=Nannochloropsis oceanica|type=polypeptide|length=617bp
MVEPINLCLGYEQRVLDSLTRPFILPVTLITGFLGSGKTTLLRSLLAQKQ
NLRIATLVNDLGEFNHDVQLLELVTTSSLKPMHHPLSHQPASDRVIDLHG
NCLCCSNLQQDMRQNVWECLQTPDGEARAVDYLVIETSGVTDPETLIRAL
DEKFGKMTRARLDSVVTVVDADVLYSELTSSMNCATKAAPDDDISVVGRV
GVSAPPLMSTARRHQLECADIILLNKIDLLQDSSQLDIVEACLQTLNPLA
RIHRTRYAEVPLPCVLDVELPDVGIGQMTHETGTANFATRNASTLRSQAS
RNVTIRRKANCLLTGSTAACAADAPALTDKNPMATHLITDGLSALTFEST
CPFLLYKLQHFFSHVFPAEAVVRCKGFMHVRDLPGRRVALSMSGRRRFHV
SDEGPWQSAPKTQLVFIGHEPGFDKAVVEIALTEACAGWDGNVEKGGNDD
ASASVQLAAKVRALVAQDERMELVDLHTLLAPLLFPRMRDKAEESMSSLP
VWANCLVAFRLTGAPSLGVTSEHLRMTHGVDLNAMSRALQAKVNLAGVLE
MPLLHTLPFGGGEEDVALCFVVKDGEEAEGRGETYYTKAWEWMVSAAANT
VTSRFLGHLKLCKCGH*

mRNA from alignment at scaffold_13:379824..385289-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5417 ID=mRNA_5417|Name=jgi.p|Nanoce1779_2|592454|organism=Nannochloropsis oceanica|type=mRNA|length=5466bp|location=Sequence derived from alignment at scaffold_13:379824..385289- (Nannochloropsis oceanica)
CAGGTTGCGCTGGCCGTCACCATGGTCGAGCCCATCAATTTGTGTCTGGG
GTACGAACAGCGCGTGTTGGATTCCTTGACGCGACCTTTCATCTTGCCCG
TCACACTCATCACGGGTTTCCTCGGCTCAGGGAAGACAACCCTGCTGCGC
AGCCTCCTAGCGCAAAAGCAGAACCTTCGTATCGCCACTCTGGTCAACGA
CCTCGGAGAATTCAACCACGACGTGCAGTTGTTGGAGCTGGTTACGACTT
CCTCCCTCAAGCCCATGCATCACCCTCTCTCCCACCAGCCTGCCTCAGAT
CGCGTAATCGACCTGCACGGCAACTGTCTCTGCTGCTCAAATCTCCAGCA
AGACATGCGACAGAATGTATGGGAATGCTTGCAAACGCCGGACGGAGAAG
CCCGGGCTGTGGATTACCTGGTGATTGAAACGAGTGGTGTCACTGACCCG
GAGACCCTTATTCGCGCCTTGGACGAGAAATTCGGAAAGATGACTCGCGC
GCGCCTGGACAGTGTCGTGACTGTGGTGGATGCGGATGTATTGTACTCCG
AGCTGACTTCGTCTATGAATTGTGCGACAAAAGCCGCTCCTGATGATGAT
ATTTCGGTGGTGGGAAGAGTAGGAGTATCTGCTCCACCACTTATGTCCAC
CGCACGGCGACACCAACTCGAATGCGCCGATATCATTCTCCTCAACAAGA
TCGATCTCCTACAAGACTCTAGCCAACTAGATATTGTCGAAGCATGCTTG
CAGACACTCAACCCACTTGCTCGTATTCATCGCACGCGCTATGCAGAGGT
CCCTTTGCCCTGTGTCCTCGACGTGGAGCTCCCAGATGTTGGGATAGGCC
AGATGACACACGAGACGGGCACTGCGAACTTCGCCACCCGCAATGCCTCT
ACACTTCGATCTCAGGCCTCGCGCAACGTAACCATCAGAAGGAAGGCGAA
TTGTTTGCTGACAGGATCCACAGCTGCCTGTGCTGCTGATGCTCCGGCTT
TGACGGACAAGAACCCGATGGCTACCCACCTCATCACTGATGGCCTCTCT
GCTCTTACGTTTGAAAGCACCTGTCCATTCCTCCTGTACAAGCTCCAACA
TTTCTTCTCTCATGTTTTCCCTGCTGAGGCCGTGGTTCGCTGCAAAGGGT
TTATGCACGTCAGGGACCTGCCCGGGAGGCGCGTGGCTCTAAGCATGAGC
GGGCGTCGGCGTTTTCACGTCTCGGACGAAGGTCCATGGCAGTCGGCCCC
GAAGACGCAACTGGTCTTTATCGGCCACGAGCCCGGCTTTGATAAAGCAG
TGGTCGAGATTGCATTGACAGAAGCTTGTGCAGGTTGGGATGGGAACGTG
GAGAAAGGAGGAAATGATGATGCCTCAGCCTCAGTTCAATTGGCGGCCAA
AGTACGGGCCCTCGTCGCCCAGGATGAACGGATGGAATTGGTGGACCTCC
ACACACTCCTCGCACCTCTACTGTTCCCGCGTATGCGAGACAAGGCCGAG
GAGTCTATGTCCAGTCTGCCCGTGTGGGCGAACTGTTTGGTGGCATTTCG
CTTGACCGGGGCGCCGTCCTTGGGCGTGACATCGGAGCACCTACGAATGA
CACACGGAGTGGATCTAAATGCAATGAGTCGGGCCTTGCAAGCGAAGGTT
AATTTGGCCGGTGTGCTAGAAATGCCACTCCTACATACGTTGCCATTCGG
GGGGGGGGAAGAGGACGTGGCCTTGTGTTTTGTTGTGAAGGATGGGGAGG
AAGCGGAGGGACGAGGGGAAACGTACTATACCAAGGCGTGGGAGTGGATG
GTGTCAGCGGCGGCCAACACTGTGACTTCTCGCTTCTTGGGTCACTTGAA
GTTGTGCAAGTGCGGCCACTAAATTGTACAAATACCGCACATTATAACAG
AATGAAAGAAAACTTGTTGAACTATGTATCGGGGGACCATGTGAAGTCCG
CTCGCCAAACCATAAGCTCGCCGAGAATTGAAAAGTCATATGGACAACAC
ACACTTTGCATGCACCAACAAAGCCTACGCCAAGCCTATACCAGCCTTGT
AATTGATGAGATGGTTAAGGACGAGTATTCAGACTTGTTATTAGCCCATT
AGACAGATGCATTCTAATGCTGCATCATCATCCAACCCCTGGTCGCTCCT
CCACAGGCAACTCACTTCCGATACAACCACTACACCACACATCCAGCCAC
CCACATCCACATCCACTTCCGTAACGATGGCCACGGAGTCAGACCCGTAC
GACTTCGATGCTCCCCAGTATTTTGACTTCGTCCGTGGGGAGAGCGGCGG
CCCTACCAGCATGCAGGGTCCTCCCCTTTCCATGCCCGCGGCGGCCGCAC
TTCCAACCTCTCCCGATGTCGTGCGCGCCGAGGTCACATCCCGGGACCCC
TGGGACTTCGATGCACCCAACTGGACCGACTTAAGTACCGTTACACCTGC
CCCGTCCTATTCGTTATCGTCCTTGTCCTCGGCGTCACCCATTACCCGTG
TCAGCAGGAGCAGTACCAGCAGCTCCAACCAGCTATCTCAACAGCCACCC
GCGGCTGCCGCGCTCGTGGCGCCCACCCCTTCCACTCCAGCACCAGACCC
TCATAAGCTCCACCAAGGGTTCGGCAAACAGTCTTTCTGTCCAGCTGCCG
GTACCCCTGCTGCTCCGGCTTCTGCAACGACAACGTCAATCCTCCCCAAG
ACTCCCGGGCCCATGGCCCGCAATGGCCCCAGCAGCCCTGCCTCATCTAA
CTCCTCCTCGCCGAGCAGTATTACAAACACTCCTATTGTTCCCCAATGTC
TTAGCACCACTCTTCCGACCACCACCACTGCTGCCACCGCAGCTGCGTCT
ATACACACCTTAATGTCAGCCTCGACGCGTATGCGATCCCCCGAACAAAA
TTTACCGGCGTCGCCCAAATATTCTGCCACTCCTGCAGCCACCGTCCGCA
AGCCTACCACGCCTGTCGGACGCATACCCTCCCCCACCCTTACTCCTTCC
CGTCGTCCAGCCTCACCCGCTGCAGTGGCAGCACCGATCCCTGCTCCCCT
CCCCACAACAGCGGTAGCAGCAGCAGGAGCAGCAGATCGTTCCTTTACGA
ATCGCCCCCGCAAAGAACCCATGGGTCATGCTATTCCCCAACAACACTCC
TACCTCGCTCAAACGTCAGCTACCATCGGTCGCCGCGTTGCCGTCAACAC
CATGGCCTCCTTCCTCCGTCCCACCCTCGCTTCGTGGGGTCGTAATCAGA
AGGACGCCACCACCAACAGTTCTAGCAGCAGCAGCGGCAGCATTATTGAG
AGAAGAAGCAGTGGTCCTACTCTTGTAAATGGACGTCCGTCCAGCAGCAG
CAGCAGCGGGCCTGTGCGGGCCATTGTCACGGGGAGAGGAGGGAACACCA
GCACCAGCACCAGCATCAGCAGGAGAAGTACAAGCAACAGCAGCAGCAGT
AGTAGAACCAACCCCAAAGAATCCACGGAAGAACGATCCTTGCGAATGGG
CATAGAAGCCAGAGAACGTTTAAAGCAACAAGTGCGTGCTAACCGCCTCG
CAGCCGAGCGGAATAAGATGGTGGGCGGTACAGCAGGCTCGGCGCCACTT
CGGTCTACCAAAAGTTTGACCATCCCACAATCTCCCCAGCTCCGTCTGAG
CGCCCGCCACGGTGAGAAGCACCTCAGTGCTAGCAGCATGGGCCAGACCA
AAGATCCCAGCATCGAGATCTACCACAAGCCCCGAGCTCTTTCACCCTCC
ACCTTCGGTAGCAGCAGCAACAGCAGCGGTGGTAATGGTTACAAGGGGCC
TAAACCTCTCACCATTCCTGTAGCCCCCTCCTTCAAGACCGATACTCGAG
CCCTTGCCCGTCGTGCCTCCCCCACCTACAACCAAAACAGTCTCGGCAGC
AGCAGCAGTCAAGCAGAAAATTTCTCCAACAGCCACCCCACTTCCTCCCT
TCGAATCAATAGTAGCAGCAGCAGCTGTGGTGGGATGGGCCTGCGCGAGT
ATGCACCAAAGTTTCCCTCTACCCGCACCTTGACCATCCCCCACACCCCC
AATCTTTCTACTAAAACCCGTGCTGCCGTCCGGAAAGGTTCCACAGGAGG
CGTAGGAGGGACGGAGGGACGGAGGGAGGACCAGCAAGAATGCAGGCAGC
AATTTAAGGCTCGGCCATTGGATAGGCGTATATTGGAGTCAACAGGGGAG
ATGGGTGTGCCTAAGGTGGCAAAGGGAGGGGTGACTCAGCCACAGCCTTT
CCATTTTTCGACCGATTCTAGACTACGCGTGCGGGCTGCTCTAGGCTCGT
CGGATTCGGCGGGGGAGCATGAGCAGCACCAGCAGCGTCGTCATCATCAG
GAAGGGAGATTGTCGGCGCCGAGGCCTTTTCAGCTGGCAACAGAGCAACG
GGGGCAACTGCACAATAGGGCATTTGAGGCTCGGATGACGCAAGACCGAG
AGGCAGAGAAGGCCGCGCGGGAGGTCCACGCCCACCCCGTCCCTCACTTC
CACCAGCAGCAGGCTCACGTCCAGCCCCAGCCCAGCACCCGACTTTTGAC
TAAATTTGAAGAGTTCCATCTCTCTTCCAACCACCGACACGAAGATGCTC
AAGGCATGTGGCAGAGGGATGTGGAGCGGTTGACGGATGAAGAGCGGAAG
CAGGTCCAGGGATCCGGTGCTCGTCGTTTCCCTGTCATGACGTTTCAACG
CGGCTTGGAGACTAAGCTATCCGAGCGAGAGCCGCTCTTCCCTTACAGTC
TCAACCTCAGTACCTCTGCTCGTGCGGGAGAGAGGAAGGCGTTTGCAGCC
GACAAGCAGGTCCGGAACGAGGAGGCCCACTTGGAGAAAGAAGCACAGCG
GAGGGCGAAGCAGAGGGTGGAGCAGGAGAAGATTCGGCATTTGCGCACGA
CGCCTGTAGTAGATTAGGGGGGGCTGAAATTTGTATCGAAGCCGATTCAA
CATAGCAGCCAACCGTTAGCATCTTATCCGTCGACGCGGAAGCTTACTGT
CCCCATTTCCCCGCAGTTCAAAACAACAGAGCGCTCGCACATGCGGCCAC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCGAGTAAAAAGTA
AAGGGAAGAAACGTGGAGACGGAAGATGAGAATGTAAGATTGGAGTGTAG
ACGAACGAGCATTACGACGGTTGGAGCTTTCTCCATGTGTGTATACGATG
CTGATGGTGAAGGAGGGGGGAGGGATGACTTGGGGACTGCAAACGAATTT
CATACCCTCCATCGCCTAGATGATAGAAGTTAAACAGTATGACGACGATC
CGCACTCTCACATGTCGGTGTGCCGTCGTAATAAGAGATAAAGAAAAAGA
AAGGAACTGGGTGTGTTGTGTGGGAGAAAGGGATGGAAAGGATCATAAGA
AAATGTTTCTATCCTACCTTTTCAAAAAGAAACGAAATAGAAATGGAAAC
AACGACAATGGAGGAC

Coding sequence (CDS) from alignment at scaffold_13:379824..385289-

>mRNA_5417 ID=mRNA_5417|Name=jgi.p|Nanoce1779_2|592454|organism=Nannochloropsis oceanica|type=CDS|length=1851bp|location=Sequence derived from alignment at scaffold_13:379824..385289- (Nannochloropsis oceanica)
ATGGTCGAGCCCATCAATTTGTGTCTGGGGTACGAACAGCGCGTGTTGGA
TTCCTTGACGCGACCTTTCATCTTGCCCGTCACACTCATCACGGGTTTCC
TCGGCTCAGGGAAGACAACCCTGCTGCGCAGCCTCCTAGCGCAAAAGCAG
AACCTTCGTATCGCCACTCTGGTCAACGACCTCGGAGAATTCAACCACGA
CGTGCAGTTGTTGGAGCTGGTTACGACTTCCTCCCTCAAGCCCATGCATC
ACCCTCTCTCCCACCAGCCTGCCTCAGATCGCGTAATCGACCTGCACGGC
AACTGTCTCTGCTGCTCAAATCTCCAGCAAGACATGCGACAGAATGTATG
GGAATGCTTGCAAACGCCGGACGGAGAAGCCCGGGCTGTGGATTACCTGG
TGATTGAAACGAGTGGTGTCACTGACCCGGAGACCCTTATTCGCGCCTTG
GACGAGAAATTCGGAAAGATGACTCGCGCGCGCCTGGACAGTGTCGTGAC
TGTGGTGGATGCGGATGTATTGTACTCCGAGCTGACTTCGTCTATGAATT
GTGCGACAAAAGCCGCTCCTGATGATGATATTTCGGTGGTGGGAAGAGTA
GGAGTATCTGCTCCACCACTTATGTCCACCGCACGGCGACACCAACTCGA
ATGCGCCGATATCATTCTCCTCAACAAGATCGATCTCCTACAAGACTCTA
GCCAACTAGATATTGTCGAAGCATGCTTGCAGACACTCAACCCACTTGCT
CGTATTCATCGCACGCGCTATGCAGAGGTCCCTTTGCCCTGTGTCCTCGA
CGTGGAGCTCCCAGATGTTGGGATAGGCCAGATGACACACGAGACGGGCA
CTGCGAACTTCGCCACCCGCAATGCCTCTACACTTCGATCTCAGGCCTCG
CGCAACGTAACCATCAGAAGGAAGGCGAATTGTTTGCTGACAGGATCCAC
AGCTGCCTGTGCTGCTGATGCTCCGGCTTTGACGGACAAGAACCCGATGG
CTACCCACCTCATCACTGATGGCCTCTCTGCTCTTACGTTTGAAAGCACC
TGTCCATTCCTCCTGTACAAGCTCCAACATTTCTTCTCTCATGTTTTCCC
TGCTGAGGCCGTGGTTCGCTGCAAAGGGTTTATGCACGTCAGGGACCTGC
CCGGGAGGCGCGTGGCTCTAAGCATGAGCGGGCGTCGGCGTTTTCACGTC
TCGGACGAAGGTCCATGGCAGTCGGCCCCGAAGACGCAACTGGTCTTTAT
CGGCCACGAGCCCGGCTTTGATAAAGCAGTGGTCGAGATTGCATTGACAG
AAGCTTGTGCAGGTTGGGATGGGAACGTGGAGAAAGGAGGAAATGATGAT
GCCTCAGCCTCAGTTCAATTGGCGGCCAAAGTACGGGCCCTCGTCGCCCA
GGATGAACGGATGGAATTGGTGGACCTCCACACACTCCTCGCACCTCTAC
TGTTCCCGCGTATGCGAGACAAGGCCGAGGAGTCTATGTCCAGTCTGCCC
GTGTGGGCGAACTGTTTGGTGGCATTTCGCTTGACCGGGGCGCCGTCCTT
GGGCGTGACATCGGAGCACCTACGAATGACACACGGAGTGGATCTAAATG
CAATGAGTCGGGCCTTGCAAGCGAAGGTTAATTTGGCCGGTGTGCTAGAA
ATGCCACTCCTACATACGTTGCCATTCGGGGGGGGGGAAGAGGACGTGGC
CTTGTGTTTTGTTGTGAAGGATGGGGAGGAAGCGGAGGGACGAGGGGAAA
CGTACTATACCAAGGCGTGGGAGTGGATGGTGTCAGCGGCGGCCAACACT
GTGACTTCTCGCTTCTTGGGTCACTTGAAGTTGTGCAAGTGCGGCCACTA
A

Synonyms

Publications