jgi.p|Nanoce1779_2|557757, mRNA_6816 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|557757
Unique Name	mRNA_6816
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4724
Alignment location	scaffold_17:170143..174866 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	557843
Track	FilteredModels2
ProteinId	557757

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_17	supercontig	scaffold_17:170143..174866 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|557757	gene_6816	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|557757	mRNA_6816-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_6816	CDS_6816	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_17:170143..174866-
coding sequence from alignment at scaffold_17:170143..174866-

mRNA sequence

>mRNA_6816 ID=mRNA_6816|Name=jgi.p|Nanoce1779_2|557757|organism=Nannochloropsis oceanica|type=mRNA|length=4724bp
CAGACCGATGCTGCCCGAAGAACAAAATAAAACAGGGCAGGTGCTTCCCG
GAAGCTAAACTAGCCCGCAAGGCTGCTATCCAGCAAGACAATGCCTTCCC
TTCCCGGCTCCCCCACCACCATTATCTTCTTGGCGTTTGGTACGCGGGGC
GACGTCCAGCCCCTCGCGCTTTTGGCCGCTGCTTTAGCCACGGTGAATCA
TCACCATATCCGATTCATCTCACATGCCCAGCATGAATCGATACTTCAGG
AGTTGTGGGCTAAATCCACAACTGCTATTGATTTTTTTGTGCCCAGCCCC
AGCCCTCCACACGCCGCCAACGTTGTGGCAGATAACAGCATCGATAGCAC
GTTGCGACCGCGCGCGCACTTAGAAGTATGCATTAAGACCGTTGAGCAGG
TGCTGAAATTGTCTTCTACTTCGTCGCCTTTGTTTCCCGGTCAAGTGCTT
TTGATTGCCAATCTTTTTGCCTTAGAAGCCGTCCATCTGGCCGAGGTTTT
TGACTTACCTCTTATCATGGCCCACCCCTTCCCTGCGCCTGCCTCTTTTC
CTTTCAACTTTAAGGCGCAATTTCGGCGGGCGGACCCTTTGCAATACAAA
TGTTTGAGAGAGAATGGCCGGGGTGAAGGAGGGAGGGAGGGAGGACAGGA
CGAAGCAACAGTTAGAGGCGACGAGAGAATGGTATCATGGAAAGATGTGG
AGCACTGGCTTTGGCCGGCATTCGCCGACTCGTGGTCGTCCTTTCGATGC
ATGCTGCTGGGATTTGACGAGGAGAGTGAGGGCTGCGACGAGCTGCCACT
ACCGTGGCTGGCAGGAAGACCGGCAATTCCGCTACTGTACTTGTACAGTG
AGAGCATCATGCCCCGCCCACAGTTCTTTCCAGAACACGCTCATGTCGTA
GGATACATGTGGCCAGAGGAAATAAGGGAATCGTACATCCCCTCTTTGGC
TTTGGCGGCATTTCTGGCTGGAGGGGCAGCGGTGGGTAAAGCGAAGGGAG
GTGGAGCTGCATCCCCAGCAGCATCAGCAACGACAGCGGGACTTGTTTGG
AAGGATGAAGACAGAGATATGAGACCACTCGCAACACCAACACCAGTAGC
ATCCACAAGATTTTTCTTGCCAGCGGCAGGTCCTATCTTATTTACTTTTG
GTACGATGATCTCTCTCGGGGCTTTGGGTAATTTGACCCGTGCTGCGACA
ACGGTGGTCGAGGCGGTGTTGTCATTTCCTTCTTCCTCCTCGTCCTCCTC
CTTCTCTTCCAGTTCCTCCTCCTTTTTGTCTTCATCTTGTTCCACAAGTT
CCACCACAATCTTGAAAATGCAACCAGCACAACGGTGCGTGATTGATGCG
GCGGGTTCGCCGAGCTGGGCCGCTGCCCTCAGGGAAGCCTTGTCTGCCCA
TCAGCAGCGACAGGAGGCGCAGCAGCTGGAGCACCAGGAGGGGGGTCAAG
ACAACAGACTCCGGGTTTTCATCCTGGAGGAGACTGTACCACATTCTTGG
CTCTTGCCGCAATGCAGTGTCGTCGTGCATCATGGAGGGAGTGGAACGAC
AGCAGCGGCGTTGCGGGCAGGGATAGCCCAAGTGACGGTCCCAGCAATGA
TGGATCAATTTCAATGGGCGGAACGCGTGGCATGGCTTGACTTGGGGCCA
TCGCCTTTGAGTCTAGCAAGAATATTCCCCCATGACGATGGTGAGGGAGA
AGATGGACTTGAGACCGAGAAGTCGCCCTCTTGCCTTCTCTCGAAGGCGA
TTAATCAGGCGTCGCATCCTCCATGTCGGCTTCGGGCCGCTGCCGCTGGA
CGTCGTTTGCGTGCGGAGCCTTCGGGTGCAACAATGTGTATAAATGTCAT
TCATGCCCACTTGGAGGAATGGAAGGGTTTTTTTAGGTCTTCCATTAACT
CTCTCAAACGTCCTTCTCTCCCAGTGCCCTTACCCGCCGGATGTGAATTT
TTGACCCTGGGGCTCTTTGAGGGCGATGACATGAACGAGAGCATGAGCAA
CAATGAGAGGATACAGAAATACGAGACTAACGAGAACAACTGCGATGATG
CAAAAAGAGCAACCGTTGTAGCAACAGCAGCGTCGTCAGCCCTGACGATT
GTGGCCTTACAAGGAAGTGAATCTGAGGTTGCCTTCATCCATCAAGAGAT
CTTCCCACCCCCCAGACGACAAGAAAGTAGGGGATGGGGCTACCTGAAGC
ACGGTGTGCATGTGAAAGAAGGGGATGTGATCTTGGATATAGGTGCCAAC
ATTGGTTTGTTTGCATTGTATCTTGATTTATACGTGATGGAAGAGCCCGA
GCAAATCTTCGTTCTTGCTGTTGAGCCCGCGCCATCCACCTTTGCAGCAC
TTCAGTACAATCTGGCCGCGCATGGAGTCAAAGTTGTGGCGTGTGTGCAG
CAAGCTGTTGGTGCTGGGACGACCAATACCATCAGCGATGGACCGGATCA
GGATCAGGAGGCAGCGCCGTCAAAGGGGATGCTTCGCTTTTTCCCCCACG
CCCCTGGTAATAGCAGCTTGTTTCTAGCCCGTAACTCTTCTGCAGGTGGT
AAGAATTATTTTCAAGGACTGAATCCACGATTACGGGCACACTTGGAGAA
AGGAGTGGAGGATATGCTTGTAGAAATGACAACGATTTCCGCCTTGGTCT
GCAATCATTCTCTCTCTCGTGTAGACCTGTTGAAAGTAGACGTTGAGGGT
TCAGAGGAGATGGCATTGAAAGGGATAGATGAGAAGACTTGGCCGTTGAT
TCGACAGGTTGTCATGGAGGTGCATAATTTTGATGGGCGGGAAGAGAGAA
TTGATGCTGTGTTGCGGAGCAAGGGCTTTGGGAAGGTGGTGTGGGAGACA
CCGCAGTGGACTGAGGGGGATGGTGGTGTTAGCACCAGAGGTGAGGTGAA
TAATCGGATGGTGTTTGCTTGTAGGACGTAGCGCTGCCCTTTAGAGGGTA
GGAGAGAGAAGATACTTCTAATGTGCATAAACCAAAGTGTGCAAAGACGG
TGGGCCTGCTTTTTTGTTCGCCACCGTGCATCTTACGTCCACATTTCCCC
CCACTTGATCCGTGCCTATCTTCATGTCGCCTTGTGATGATATACGACTC
TAGCATTACAAGCAGATCTAGCAGGACACTGGCATTGTTCCGTGCGCTTC
AAAGCTGCATGGCCATAGGCAAGAATCTTCCCACTCTTTCGGAGGTGGCT
TCATATGCGATGCAATATAGATGTACAAGGAATTCTGTCGTCCAAAAGTT
GTGCGTAACTTTATTTACATTACCACTGCTTGTACTAGTAATTACCTATC
TACCTATGCTAGCCCCTCCTCTTCCCGGTTTCCCATTTTTTTGCATCCGC
TCGTAAACCGTTTCGACCCGTTGCCTCTCCTCCATATGAAGCACGGCCGG
GTCCCGGTCCAATACCATAAGCGTCCTCTGAATCGTCTGCCGGGCCTGGG
CCTCGGCCCCGTCCGCGGTGGCTTGGAGAAAGGGATGCTGCAAGAGACTT
GAGGTTCCACCAGCGATGGGGGGTCTTGCGGTGGGATCCCGCCGCAAGCA
CTGCTGGATGGTATCACGCATGTCCGGATGCAACACATGGGCCTTCTCAT
CAGGAAAAGCAATCTGGTACCGCTCATCCACGATGCAATGCAACTTCTGA
ATCAAGTTCAAATCCGCAAAGGGCGTCTTCCCGTAGACAAGCTGGTACAA
AATACACCCCAACGACCACACATCGCTGGCCCTCCCAATCTTCATGCATG
GCGCCCTCCTTCCGCCCATCCCCGGCTGCTCCCGCCCATTCCCCGTATCC
AGAATCGCTTCAGGAGACATGTAATTGACCGTGCCCACCTGCGACTCACG
CATGATGTTCGTGGTATCATTTCCAATCGCCTTGGCTATCCCGAAATCAA
TCAATTTCAGCCTCCCCCGGACAAAGACAAAGTTAGCCGGCTTCAAGTCC
CCGTGCACGATCCGTTCCTCATGCACGCAATGTACCGCCCGCAACATCTG
CTCCCAGACAAACCTCACAAAATTCAAGCTCAATCTTCCTGTAACTTTCC
CTTCCCCATCGCTGTCCGTCGCCTCGGCTGCTGCCTGCTGTGCCAAGAGC
TTGCTCAGGTCGATCTCGCCCAGTTCCATCAACATGAGAACCAAGCCCGT
CGCCCTGTCCACTGACGAATCCACCAACTGAATTATACACGGATGTCCCC
GCAAGCGCGCCAAAAGAGTGATTTCATTGGCGAACGATTCAAGGGCCTTC
CCATCTTTAGGTGGGACCCGCACGCGTTTAAGTGCATATATGTGCCCGGT
ATCAGAGAGGACACGAAAGACCTTGCTGCTCCCTCCTCGGCCAACAACAT
CCAGGCGCAAGTATTGGATTTTGTTTAAAGTCATAAAATTACGGGAGGCG
AGGAGGGTTTCGAAGGAGAACTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGATGATGATGATGATGTTGTTGTTCTTGTT
GGTGATGCTGGAGCTGGTGCTGGAGCTGGTGCTGCGGGGGAGTGTAAGAT
TGGGTAAAGGCGGGTTGATTGTGCTTTGGATGGTGCTGTTGTTGCTCCTG
CTGCTGGTGGTGATGGAGCGGAGAAGGAGGAGGAGCCTTGGTCGCAGAGG
TCGTGCTAGCACTTTGTGGTTTCGTGACGCTGTGTAGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGC

protein sequence of jgi.p|Nanoce1779_2|557757

>mRNA_6816-protein ID=mRNA_6816-protein|Name=jgi.p|Nanoce1779_2|557757|organism=Nannochloropsis oceanica|type=polypeptide|length=947bp
MPSLPGSPTTIIFLAFGTRGDVQPLALLAAALATVNHHHIRFISHAQHES
ILQELWAKSTTAIDFFVPSPSPPHAANVVADNSIDSTLRPRAHLEVCIKT
VEQVLKLSSTSSPLFPGQVLLIANLFALEAVHLAEVFDLPLIMAHPFPAP
ASFPFNFKAQFRRADPLQYKCLRENGRGEGGREGGQDEATVRGDERMVSW
KDVEHWLWPAFADSWSSFRCMLLGFDEESEGCDELPLPWLAGRPAIPLLY
LYSESIMPRPQFFPEHAHVVGYMWPEEIRESYIPSLALAAFLAGGAAVGK
AKGGGAASPAASATTAGLVWKDEDRDMRPLATPTPVASTRFFLPAAGPIL
FTFGTMISLGALGNLTRAATTVVEAVLSFPSSSSSSSFSSSSSSFLSSSC
STSSTTILKMQPAQRCVIDAAGSPSWAAALREALSAHQQRQEAQQLEHQE
GGQDNRLRVFILEETVPHSWLLPQCSVVVHHGGSGTTAAALRAGIAQVTV
PAMMDQFQWAERVAWLDLGPSPLSLARIFPHDDGEGEDGLETEKSPSCLL
SKAINQASHPPCRLRAAAAGRRLRAEPSGATMCINVIHAHLEEWKGFFRS
SINSLKRPSLPVPLPAGCEFLTLGLFEGDDMNESMSNNERIQKYETNENN
CDDAKRATVVATAASSALTIVALQGSESEVAFIHQEIFPPPRRQESRGWG
YLKHGVHVKEGDVILDIGANIGLFALYLDLYVMEEPEQIFVLAVEPAPST
FAALQYNLAAHGVKVVACVQQAVGAGTTNTISDGPDQDQEAAPSKGMLRF
FPHAPGNSSLFLARNSSAGGKNYFQGLNPRLRAHLEKGVEDMLVEMTTIS
ALVCNHSLSRVDLLKVDVEGSEEMALKGIDEKTWPLIRQVVMEVHNFDGR
EERIDAVLRSKGFGKVVWETPQWTEGDGGVSTRGEVNNRMVFACRT*

mRNA from alignment at scaffold_17:170143..174866-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6816 ID=mRNA_6816|Name=jgi.p|Nanoce1779_2|557757|organism=Nannochloropsis oceanica|type=mRNA|length=4724bp|location=Sequence derived from alignment at scaffold_17:170143..174866- (Nannochloropsis oceanica)
CAGACCGATGCTGCCCGAAGAACAAAATAAAACAGGGCAGGTGCTTCCCG
GAAGCTAAACTAGCCCGCAAGGCTGCTATCCAGCAAGACAATGCCTTCCC
TTCCCGGCTCCCCCACCACCATTATCTTCTTGGCGTTTGGTACGCGGGGC
GACGTCCAGCCCCTCGCGCTTTTGGCCGCTGCTTTAGCCACGGTGAATCA
TCACCATATCCGATTCATCTCACATGCCCAGCATGAATCGATACTTCAGG
AGTTGTGGGCTAAATCCACAACTGCTATTGATTTTTTTGTGCCCAGCCCC
AGCCCTCCACACGCCGCCAACGTTGTGGCAGATAACAGCATCGATAGCAC
GTTGCGACCGCGCGCGCACTTAGAAGTATGCATTAAGACCGTTGAGCAGG
TGCTGAAATTGTCTTCTACTTCGTCGCCTTTGTTTCCCGGTCAAGTGCTT
TTGATTGCCAATCTTTTTGCCTTAGAAGCCGTCCATCTGGCCGAGGTTTT
TGACTTACCTCTTATCATGGCCCACCCCTTCCCTGCGCCTGCCTCTTTTC
CTTTCAACTTTAAGGCGCAATTTCGGCGGGCGGACCCTTTGCAATACAAA
TGTTTGAGAGAGAATGGCCGGGGTGAAGGAGGGAGGGAGGGAGGACAGGA
CGAAGCAACAGTTAGAGGCGACGAGAGAATGGTATCATGGAAAGATGTGG
AGCACTGGCTTTGGCCGGCATTCGCCGACTCGTGGTCGTCCTTTCGATGC
ATGCTGCTGGGATTTGACGAGGAGAGTGAGGGCTGCGACGAGCTGCCACT
ACCGTGGCTGGCAGGAAGACCGGCAATTCCGCTACTGTACTTGTACAGTG
AGAGCATCATGCCCCGCCCACAGTTCTTTCCAGAACACGCTCATGTCGTA
GGATACATGTGGCCAGAGGAAATAAGGGAATCGTACATCCCCTCTTTGGC
TTTGGCGGCATTTCTGGCTGGAGGGGCAGCGGTGGGTAAAGCGAAGGGAG
GTGGAGCTGCATCCCCAGCAGCATCAGCAACGACAGCGGGACTTGTTTGG
AAGGATGAAGACAGAGATATGAGACCACTCGCAACACCAACACCAGTAGC
ATCCACAAGATTTTTCTTGCCAGCGGCAGGTCCTATCTTATTTACTTTTG
GTACGATGATCTCTCTCGGGGCTTTGGGTAATTTGACCCGTGCTGCGACA
ACGGTGGTCGAGGCGGTGTTGTCATTTCCTTCTTCCTCCTCGTCCTCCTC
CTTCTCTTCCAGTTCCTCCTCCTTTTTGTCTTCATCTTGTTCCACAAGTT
CCACCACAATCTTGAAAATGCAACCAGCACAACGGTGCGTGATTGATGCG
GCGGGTTCGCCGAGCTGGGCCGCTGCCCTCAGGGAAGCCTTGTCTGCCCA
TCAGCAGCGACAGGAGGCGCAGCAGCTGGAGCACCAGGAGGGGGGTCAAG
ACAACAGACTCCGGGTTTTCATCCTGGAGGAGACTGTACCACATTCTTGG
CTCTTGCCGCAATGCAGTGTCGTCGTGCATCATGGAGGGAGTGGAACGAC
AGCAGCGGCGTTGCGGGCAGGGATAGCCCAAGTGACGGTCCCAGCAATGA
TGGATCAATTTCAATGGGCGGAACGCGTGGCATGGCTTGACTTGGGGCCA
TCGCCTTTGAGTCTAGCAAGAATATTCCCCCATGACGATGGTGAGGGAGA
AGATGGACTTGAGACCGAGAAGTCGCCCTCTTGCCTTCTCTCGAAGGCGA
TTAATCAGGCGTCGCATCCTCCATGTCGGCTTCGGGCCGCTGCCGCTGGA
CGTCGTTTGCGTGCGGAGCCTTCGGGTGCAACAATGTGTATAAATGTCAT
TCATGCCCACTTGGAGGAATGGAAGGGTTTTTTTAGGTCTTCCATTAACT
CTCTCAAACGTCCTTCTCTCCCAGTGCCCTTACCCGCCGGATGTGAATTT
TTGACCCTGGGGCTCTTTGAGGGCGATGACATGAACGAGAGCATGAGCAA
CAATGAGAGGATACAGAAATACGAGACTAACGAGAACAACTGCGATGATG
CAAAAAGAGCAACCGTTGTAGCAACAGCAGCGTCGTCAGCCCTGACGATT
GTGGCCTTACAAGGAAGTGAATCTGAGGTTGCCTTCATCCATCAAGAGAT
CTTCCCACCCCCCAGACGACAAGAAAGTAGGGGATGGGGCTACCTGAAGC
ACGGTGTGCATGTGAAAGAAGGGGATGTGATCTTGGATATAGGTGCCAAC
ATTGGTTTGTTTGCATTGTATCTTGATTTATACGTGATGGAAGAGCCCGA
GCAAATCTTCGTTCTTGCTGTTGAGCCCGCGCCATCCACCTTTGCAGCAC
TTCAGTACAATCTGGCCGCGCATGGAGTCAAAGTTGTGGCGTGTGTGCAG
CAAGCTGTTGGTGCTGGGACGACCAATACCATCAGCGATGGACCGGATCA
GGATCAGGAGGCAGCGCCGTCAAAGGGGATGCTTCGCTTTTTCCCCCACG
CCCCTGGTAATAGCAGCTTGTTTCTAGCCCGTAACTCTTCTGCAGGTGGT
AAGAATTATTTTCAAGGACTGAATCCACGATTACGGGCACACTTGGAGAA
AGGAGTGGAGGATATGCTTGTAGAAATGACAACGATTTCCGCCTTGGTCT
GCAATCATTCTCTCTCTCGTGTAGACCTGTTGAAAGTAGACGTTGAGGGT
TCAGAGGAGATGGCATTGAAAGGGATAGATGAGAAGACTTGGCCGTTGAT
TCGACAGGTTGTCATGGAGGTGCATAATTTTGATGGGCGGGAAGAGAGAA
TTGATGCTGTGTTGCGGAGCAAGGGCTTTGGGAAGGTGGTGTGGGAGACA
CCGCAGTGGACTGAGGGGGATGGTGGTGTTAGCACCAGAGGTGAGGTGAA
TAATCGGATGGTGTTTGCTTGTAGGACGTAGCGCTGCCCTTTAGAGGGTA
GGAGAGAGAAGATACTTCTAATGTGCATAAACCAAAGTGTGCAAAGACGG
TGGGCCTGCTTTTTTGTTCGCCACCGTGCATCTTACGTCCACATTTCCCC
CCACTTGATCCGTGCCTATCTTCATGTCGCCTTGTGATGATATACGACTC
TAGCATTACAAGCAGATCTAGCAGGACACTGGCATTGTTCCGTGCGCTTC
AAAGCTGCATGGCCATAGGCAAGAATCTTCCCACTCTTTCGGAGGTGGCT
TCATATGCGATGCAATATAGATGTACAAGGAATTCTGTCGTCCAAAAGTT
GTGCGTAACTTTATTTACATTACCACTGCTTGTACTAGTAATTACCTATC
TACCTATGCTAGCCCCTCCTCTTCCCGGTTTCCCATTTTTTTGCATCCGC
TCGTAAACCGTTTCGACCCGTTGCCTCTCCTCCATATGAAGCACGGCCGG
GTCCCGGTCCAATACCATAAGCGTCCTCTGAATCGTCTGCCGGGCCTGGG
CCTCGGCCCCGTCCGCGGTGGCTTGGAGAAAGGGATGCTGCAAGAGACTT
GAGGTTCCACCAGCGATGGGGGGTCTTGCGGTGGGATCCCGCCGCAAGCA
CTGCTGGATGGTATCACGCATGTCCGGATGCAACACATGGGCCTTCTCAT
CAGGAAAAGCAATCTGGTACCGCTCATCCACGATGCAATGCAACTTCTGA
ATCAAGTTCAAATCCGCAAAGGGCGTCTTCCCGTAGACAAGCTGGTACAA
AATACACCCCAACGACCACACATCGCTGGCCCTCCCAATCTTCATGCATG
GCGCCCTCCTTCCGCCCATCCCCGGCTGCTCCCGCCCATTCCCCGTATCC
AGAATCGCTTCAGGAGACATGTAATTGACCGTGCCCACCTGCGACTCACG
CATGATGTTCGTGGTATCATTTCCAATCGCCTTGGCTATCCCGAAATCAA
TCAATTTCAGCCTCCCCCGGACAAAGACAAAGTTAGCCGGCTTCAAGTCC
CCGTGCACGATCCGTTCCTCATGCACGCAATGTACCGCCCGCAACATCTG
CTCCCAGACAAACCTCACAAAATTCAAGCTCAATCTTCCTGTAACTTTCC
CTTCCCCATCGCTGTCCGTCGCCTCGGCTGCTGCCTGCTGTGCCAAGAGC
TTGCTCAGGTCGATCTCGCCCAGTTCCATCAACATGAGAACCAAGCCCGT
CGCCCTGTCCACTGACGAATCCACCAACTGAATTATACACGGATGTCCCC
GCAAGCGCGCCAAAAGAGTGATTTCATTGGCGAACGATTCAAGGGCCTTC
CCATCTTTAGGTGGGACCCGCACGCGTTTAAGTGCATATATGTGCCCGGT
ATCAGAGAGGACACGAAAGACCTTGCTGCTCCCTCCTCGGCCAACAACAT
CCAGGCGCAAGTATTGGATTTTGTTTAAAGTCATAAAATTACGGGAGGCG
AGGAGGGTTTCGAAGGAGAACTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGATGATGATGATGATGTTGTTGTTCTTGTT
GGTGATGCTGGAGCTGGTGCTGGAGCTGGTGCTGCGGGGGAGTGTAAGAT
TGGGTAAAGGCGGGTTGATTGTGCTTTGGATGGTGCTGTTGTTGCTCCTG
CTGCTGGTGGTGATGGAGCGGAGAAGGAGGAGGAGCCTTGGTCGCAGAGG
TCGTGCTAGCACTTTGTGGTTTCGTGACGCTGTGTAGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGC

Coding sequence (CDS) from alignment at scaffold_17:170143..174866-

>mRNA_6816 ID=mRNA_6816|Name=jgi.p|Nanoce1779_2|557757|organism=Nannochloropsis oceanica|type=CDS|length=2841bp|location=Sequence derived from alignment at scaffold_17:170143..174866- (Nannochloropsis oceanica)
ATGCCTTCCCTTCCCGGCTCCCCCACCACCATTATCTTCTTGGCGTTTGG
TACGCGGGGCGACGTCCAGCCCCTCGCGCTTTTGGCCGCTGCTTTAGCCA
CGGTGAATCATCACCATATCCGATTCATCTCACATGCCCAGCATGAATCG
ATACTTCAGGAGTTGTGGGCTAAATCCACAACTGCTATTGATTTTTTTGT
GCCCAGCCCCAGCCCTCCACACGCCGCCAACGTTGTGGCAGATAACAGCA
TCGATAGCACGTTGCGACCGCGCGCGCACTTAGAAGTATGCATTAAGACC
GTTGAGCAGGTGCTGAAATTGTCTTCTACTTCGTCGCCTTTGTTTCCCGG
TCAAGTGCTTTTGATTGCCAATCTTTTTGCCTTAGAAGCCGTCCATCTGG
CCGAGGTTTTTGACTTACCTCTTATCATGGCCCACCCCTTCCCTGCGCCT
GCCTCTTTTCCTTTCAACTTTAAGGCGCAATTTCGGCGGGCGGACCCTTT
GCAATACAAATGTTTGAGAGAGAATGGCCGGGGTGAAGGAGGGAGGGAGG
GAGGACAGGACGAAGCAACAGTTAGAGGCGACGAGAGAATGGTATCATGG
AAAGATGTGGAGCACTGGCTTTGGCCGGCATTCGCCGACTCGTGGTCGTC
CTTTCGATGCATGCTGCTGGGATTTGACGAGGAGAGTGAGGGCTGCGACG
AGCTGCCACTACCGTGGCTGGCAGGAAGACCGGCAATTCCGCTACTGTAC
TTGTACAGTGAGAGCATCATGCCCCGCCCACAGTTCTTTCCAGAACACGC
TCATGTCGTAGGATACATGTGGCCAGAGGAAATAAGGGAATCGTACATCC
CCTCTTTGGCTTTGGCGGCATTTCTGGCTGGAGGGGCAGCGGTGGGTAAA
GCGAAGGGAGGTGGAGCTGCATCCCCAGCAGCATCAGCAACGACAGCGGG
ACTTGTTTGGAAGGATGAAGACAGAGATATGAGACCACTCGCAACACCAA
CACCAGTAGCATCCACAAGATTTTTCTTGCCAGCGGCAGGTCCTATCTTA
TTTACTTTTGGTACGATGATCTCTCTCGGGGCTTTGGGTAATTTGACCCG
TGCTGCGACAACGGTGGTCGAGGCGGTGTTGTCATTTCCTTCTTCCTCCT
CGTCCTCCTCCTTCTCTTCCAGTTCCTCCTCCTTTTTGTCTTCATCTTGT
TCCACAAGTTCCACCACAATCTTGAAAATGCAACCAGCACAACGGTGCGT
GATTGATGCGGCGGGTTCGCCGAGCTGGGCCGCTGCCCTCAGGGAAGCCT
TGTCTGCCCATCAGCAGCGACAGGAGGCGCAGCAGCTGGAGCACCAGGAG
GGGGGTCAAGACAACAGACTCCGGGTTTTCATCCTGGAGGAGACTGTACC
ACATTCTTGGCTCTTGCCGCAATGCAGTGTCGTCGTGCATCATGGAGGGA
GTGGAACGACAGCAGCGGCGTTGCGGGCAGGGATAGCCCAAGTGACGGTC
CCAGCAATGATGGATCAATTTCAATGGGCGGAACGCGTGGCATGGCTTGA
CTTGGGGCCATCGCCTTTGAGTCTAGCAAGAATATTCCCCCATGACGATG
GTGAGGGAGAAGATGGACTTGAGACCGAGAAGTCGCCCTCTTGCCTTCTC
TCGAAGGCGATTAATCAGGCGTCGCATCCTCCATGTCGGCTTCGGGCCGC
TGCCGCTGGACGTCGTTTGCGTGCGGAGCCTTCGGGTGCAACAATGTGTA
TAAATGTCATTCATGCCCACTTGGAGGAATGGAAGGGTTTTTTTAGGTCT
TCCATTAACTCTCTCAAACGTCCTTCTCTCCCAGTGCCCTTACCCGCCGG
ATGTGAATTTTTGACCCTGGGGCTCTTTGAGGGCGATGACATGAACGAGA
GCATGAGCAACAATGAGAGGATACAGAAATACGAGACTAACGAGAACAAC
TGCGATGATGCAAAAAGAGCAACCGTTGTAGCAACAGCAGCGTCGTCAGC
CCTGACGATTGTGGCCTTACAAGGAAGTGAATCTGAGGTTGCCTTCATCC
ATCAAGAGATCTTCCCACCCCCCAGACGACAAGAAAGTAGGGGATGGGGC
TACCTGAAGCACGGTGTGCATGTGAAAGAAGGGGATGTGATCTTGGATAT
AGGTGCCAACATTGGTTTGTTTGCATTGTATCTTGATTTATACGTGATGG
AAGAGCCCGAGCAAATCTTCGTTCTTGCTGTTGAGCCCGCGCCATCCACC
TTTGCAGCACTTCAGTACAATCTGGCCGCGCATGGAGTCAAAGTTGTGGC
GTGTGTGCAGCAAGCTGTTGGTGCTGGGACGACCAATACCATCAGCGATG
GACCGGATCAGGATCAGGAGGCAGCGCCGTCAAAGGGGATGCTTCGCTTT
TTCCCCCACGCCCCTGGTAATAGCAGCTTGTTTCTAGCCCGTAACTCTTC
TGCAGGTGGTAAGAATTATTTTCAAGGACTGAATCCACGATTACGGGCAC
ACTTGGAGAAAGGAGTGGAGGATATGCTTGTAGAAATGACAACGATTTCC
GCCTTGGTCTGCAATCATTCTCTCTCTCGTGTAGACCTGTTGAAAGTAGA
CGTTGAGGGTTCAGAGGAGATGGCATTGAAAGGGATAGATGAGAAGACTT
GGCCGTTGATTCGACAGGTTGTCATGGAGGTGCATAATTTTGATGGGCGG
GAAGAGAGAATTGATGCTGTGTTGCGGAGCAAGGGCTTTGGGAAGGTGGT
GTGGGAGACACCGCAGTGGACTGAGGGGGATGGTGGTGTTAGCACCAGAG
GTGAGGTGAATAATCGGATGGTGTTTGCTTGTAGGACGTAG

Synonyms

Publications