Properties
| Property Name | Value |
|---|
| TranscriptId | 567750 |
| Track | FilteredModels2 |
| ProteinId | 567664 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:346871..347591 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6642 ID=mRNA_6642|Name=jgi.p|Nanoce1779_2|567664|organism=Nannochloropsis oceanica|type=mRNA|length=495bp
ATGCTTTGGAGCTCTGCCACGAAGGCTGGAGCCATGATGTGGAGAGGGGT
TGTGGCTTCGCGTTCAGGGAAGGGACGCGTACTGCGAGGGGCGTTCTCCT
CGGCTACCGACACGGGGGCGCGCACGAGCAGTAGAGGGGAGTCTGGAAAG
CCCTTGAAGGGAGATTACCAGCCCATTGGTGTGGTGGCTGCGGTTGCGGG
CTCTACCGCTTACGGCGTCCACCATCTTGACCAGATGGAGATAAAGCGCA
TCGAGAGTGAGAGCAAGTCGGAGGTTGCTCGTATCCAGGAGAAGGCGGCG
ACGGAGGTTGCTCGTATTGAGGGCGACCGAAAGTTGTCAGAGCTTTTCTG
GAAGGCAGAGGTAGAGCGGTACAAGCACGACCTCCAACTTGCGTACACGG
AAGACTATGAGCCCTATCAGGCCGCAGTTTCGAAGACAAGAAATAAAACA
AGGGGAGGAAACGGAGTATCCGAGGAGGATGAGAAGAAGGGCTAG back to topprotein sequence of jgi.p|Nanoce1779_2|567664 >mRNA_6642-protein ID=mRNA_6642-protein|Name=jgi.p|Nanoce1779_2|567664|organism=Nannochloropsis oceanica|type=polypeptide|length=165bp
MLWSSATKAGAMMWRGVVASRSGKGRVLRGAFSSATDTGARTSSRGESGK
PLKGDYQPIGVVAAVAGSTAYGVHHLDQMEIKRIESESKSEVARIQEKAA
TEVARIEGDRKLSELFWKAEVERYKHDLQLAYTEDYEPYQAAVSKTRNKT
RGGNGVSEEDEKKG* back to topmRNA from alignment at scaffold_18:346871..347591+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6642 ID=mRNA_6642|Name=jgi.p|Nanoce1779_2|567664|organism=Nannochloropsis oceanica|type=mRNA|length=721bp|location=Sequence derived from alignment at scaffold_18:346871..347591+ (Nannochloropsis oceanica)
ATGCTTTGGAGCTCTGCCACGAAGGCTGGAGCCATGATGTGGAGAGGGGT
TGTGGCTTCGCGTTCAGGTAAGGTGGCATATTGTAATGCATTTTGGAAGG
AGGGCTTGGTGGCTATTGGTAAGGGGTGGGGGGGGGGGGGGGGGACGTTT
GGTGCACGCGACCGCATACTGCCCGAGGGATGTTGGTTCGTTTTTATCTG
CACGTCTATCTCGTTTGAGGTGCAATCTGTGTTGTGCGGACAAGGGCCGG
TGCCAAGGTGCTCATGCACGAGCACATTCATACACGCCGACAGGGAAGGG
ACGCGTACTGCGAGGGGCGTTCTCCTCGGCTACCGACACGGGGGCGCGCA
CGAGCAGTAGAGGGGAGTCTGGAAAGCCCTTGAAGGGAGATTACCAGCCC
ATTGGTGTGGTGGCTGCGGTTGCGGGCTCTACCGCTTACGGCGTCCACCA
TCTTGACCAGATGGAGATAAAGCGCATCGAGAGTGAGAGCAAGTCGGAGG
TTGCTCGTATCCAGGAGAAGGCGGCGACGGAGGTTGCTCGTATTGAGGGC
GACCGAAAGTTGTCAGAGCTTTTCTGGAAGGCAGAGGTAGAGCGGTACAA
GCACGACCTCCAACTTGCGTACACGGAAGACTATGAGCCCTATCAGGCCG
CAGTTTCGAAGACAAGAAATAAAACAAGGGGAGGAAACGGAGTATCCGAG
GAGGATGAGAAGAAGGGCTAG back to topCoding sequence (CDS) from alignment at scaffold_18:346871..347591+ >mRNA_6642 ID=mRNA_6642|Name=jgi.p|Nanoce1779_2|567664|organism=Nannochloropsis oceanica|type=CDS|length=990bp|location=Sequence derived from alignment at scaffold_18:346871..347591+ (Nannochloropsis oceanica)
ATGCTTTGGAGCTCTGCCACGAAGGCTGGAGCCATGATGTGGAGAGGGGT
TGTGGCTTCGCGTTCAGGGAAGGGACGCGTACTGCGAGGGGCGTTCTCCT
CGGCTACCGACACGGGGGCGCGCACGAGCAGTAGAGGGGAGTCTGGAAAG
CCCTTGAAGGGAGATTACCAGCCCATTGGTGTGGTGGCTGCGGTTGCGGG
CTCTACCGCTTACGGCGTCCACCATCTTGACCAGATGGAGATAAAGCGCA
TCGAGAGTGAGAGCAAGTCGGAGGTTGCTCGTATCCAGGAGAAGGCGGCG
ACGGAGGTTGCTCGTATTGAGGGCGACCGAAAGTTGTCAGAGCTTTTCTG
GAAGGCAGAGGTAGAGCGGTACAAGCACGACCTCCAACTTGCGTACACGG
AAGACTATGAGCCCTATCAGGCCGCAGTTTCGAAGACAAGAAATAAAACA
AGGGGAGGAAACGGAGTATCCGAGGAGGATGAGAAGAAGGGCTAGATGCT
TTGGAGCTCTGCCACGAAGGCTGGAGCCATGATGTGGAGAGGGGTTGTGG
CTTCGCGTTCAGGGAAGGGACGCGTACTGCGAGGGGCGTTCTCCTCGGCT
ACCGACACGGGGGCGCGCACGAGCAGTAGAGGGGAGTCTGGAAAGCCCTT
GAAGGGAGATTACCAGCCCATTGGTGTGGTGGCTGCGGTTGCGGGCTCTA
CCGCTTACGGCGTCCACCATCTTGACCAGATGGAGATAAAGCGCATCGAG
AGTGAGAGCAAGTCGGAGGTTGCTCGTATCCAGGAGAAGGCGGCGACGGA
GGTTGCTCGTATTGAGGGCGACCGAAAGTTGTCAGAGCTTTTCTGGAAGG
CAGAGGTAGAGCGGTACAAGCACGACCTCCAACTTGCGTACACGGAAGAC
TATGAGCCCTATCAGGCCGCAGTTTCGAAGACAAGAAATAAAACAAGGGG
AGGAAACGGAGTATCCGAGGAGGATGAGAAGAAGGGCTAG back to top
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