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Properties
| Property Name | Value |
|---|
| TranscriptId | 601576 |
| Track | FilteredModels2 |
| ProteinId | 601490 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_23 | supercontig | scaffold_23:309860..313101 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8303 ID=mRNA_8303|Name=jgi.p|Nanoce1779_2|601490|organism=Nannochloropsis oceanica|type=mRNA|length=2628bp
ACAGACACTTCGTTCTCGAGAAAATCAGGAAGCCATGGCTGTAACCAGCC
TCACGGACTTGTGTTTTTGCGGTCCCAAGATCCTCCTTCCTTTCCTAGGA
GGGGCGATGGTGGCCCTGGTGGCTGTCTACGCGGACTGGGCCTTGTACAA
ACGGGCCAATAAAAGCCTAGGCGGGAAGGACGGGAAGAAAGTAGCAGGAT
TCAGCCTTGAGGCCCTGCCGAGCGAGCTCAAGCTCCTGATTTGTGCCGGG
GGGATTTACGCGTCTTATTTGACGTTTGGGGTGTTGCAGGAGCAAATTTT
TAAATACCGGGGGCCGCAGGGGGAGCGATTCACGGCGACTTTATTTTTGC
TGTGGGTTCAGTGTTTGGTGAATGCCTTGTTTGCACTTTGCTTTATGGTG
GGCGGCTCGAGGAGCAAGCAGAAAATCCCCCTCTTCAATTTCGGATTGAC
TGGCACGAGTTATATTCTGGCCATGCTCTTTTCCAATGAGGCGCTGAAGT
ATGTATCGTATCCGACACAGGCCCTGGGCAAGAGCTGCAAGATGGTGCCG
GTCATGCTGTTTGGGGTGCTGATTCGCGGAAAGAAATACCGGCCGGTGGA
GTATTTCTGTGTGTTTTTGGTGACGCTGGGTATCACGATGTTTCAGATGT
ATGGCGGAAAGAAGAAGGCTGCTCCTGCCGTGGGGGGTCACGGAGGGAAG
GAGGAGGGAGGGGACTCGATTTACGGGGTGCTGCTGCTGTTGCTGTCGCT
GGTGATGGATGGGGTGACGGGCGCGGTCCAAGACAAGCTCAAGACGCTGT
GCAAGCCCACGGTGCATGAGTTCATGTTCTACACCAACACGGCGGGTGTG
CTGGTCTGTTCGGTCCTGGTGGTGGCCACGGGGCAGTTCTCCGAGGGGCT
ATCTTTTTGCATGGATCACCCCGCCCTGTTCAGCACCATGTGCTGGTTCT
CTCTCACCTCGGCGCTGGGCCAAAACTTCATCTTTTTGACAATCAAATTT
TTTGATGCTTTGGTCCTGACGACGGTGACGACGACAAGGAAATTCTTCAC
AATCTTGGTGAGTGTGGTCATGTACGGCCATAGCCTGAACAATAAACAGT
GGCTGGCGGTGCTGCTCGTCTTCTTCGGCTTGTCGGGAGAGGTCTACGAC
AAATACGAAAAGAAGAGGAAGGCCCAGCACGCCAAGGCACTTGCGGGGGG
GGTAAAGAAGGAGTAGATGAAGATATGGAAGGAGAGAGGAGAAAGACGTC
CAATGCAACCATCTCTTCTATTCGCCTACATACATCCGGGCGTCACGTTT
CAACACTTTTGCCTGTCCTGTGAAGCTAATTGAGGAATTTCTATCTTTTT
CGATATACTCTAAGACACTTTTTGAGAAAGAACGAGGGATGCAAGTGGAG
GAAAAAGAGAGAGCAAGGGCGCATAATCAGGATTGCCAAAGCAAACTTTG
TGCGTTTCTAAACAAATAAAGGGGCAGGCATTTTTGTGAGGGCTTCAAAA
AATCAAAGCCAGAAGGAAAATAAGTGAATTAGCTTGCTTGAGAGTTTTTT
AGACTTGTTATTTTCCCTTTCTATGAATGTATTGGACTTTCACTAAGGGA
AGGATGAAAGAAGCCAAAGCACAATCAGCAACTGCAAAGGAAGAACAATT
AATTACAGGCACTCCTCTACCAAAAGCAAGTATGTCTGATCACCATTCTA
TCGTATAACAATTTAAACCCCCGTTTGTGCGTGGTGTGAGGGGTGTGTAC
GTGTGTATACGTGTCCAGCTTTATTGTAAAATAATGCTCTATACACGCTT
CTTTCCTGTCCTCTCACAACCCACTTCGTTTCCATTTTTACTCGGAGCGA
GAGGCGAGGTAGAGGGAATGGAGGGTCGCTGATGTGCACAGAAGAATGCT
AAGGGTGCTCCCCACTAGCACCATATGACAGGAGGTTTTATTGAGCACGT
GCTGCTTGCGATGCCGGATCTTGGGAGGGAGGAGAGGAGGGAGGGAAGGA
GGATGGATGGATGGTGTAAGTGTTCTCTCCTCCCTCATGCTAAAATGATG
ACTCGTGCTCCTTTCGCTCCGTCCCCCCGCCGATTTAGCCCATGCCTCGA
GGTAGAAGGCAGGAGGCAAGGCCCTTCTATCTCATTCTCCTCCTCGTCTC
CCTCGCACCCCCCTTACCCCTTCCGATCTGCCCCCCCACTTCCCATTCGT
ACCTTGAGATAGAAGGCGCACGGCAGGGTCAGGCAAAGCAAAAATCCCAT
ACTCGAGCCGCACAGGCTCCAAATAAACTGTTTAATGGATTCGTTCGCGG
CGGAAGCGCACGCGTTGTATAAATAAAAGGTGGGCGAATGAGTGGGTGAG
CAACTGCACACATGTCGCCGTCGTGCCGGGATAATGAGAGAAAAGTGAGA
GACGCGAGACCGACCAAATCGGGGGAAATCAATTTAAATTGAACAAGACA
ATAAACCAATCAATCGAATCAAGCCCGGTTTGCCCCCTTCTTCTCCTGTC
TGTCCGTTTGGTCTTACCCCCCCCTTACCGAGATCCCGGGCGCGGACATG
GCGGCCCGATATCCGCCTATGAGGAGGAAGAGCGTCACCAGAAAGTGCCT
GAGGGCCTGCAGCGCCTCCGCCCTTTCG back to topprotein sequence of jgi.p|Nanoce1779_2|601490 >mRNA_8303-protein ID=mRNA_8303-protein|Name=jgi.p|Nanoce1779_2|601490|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp
MAVTSLTDLCFCGPKILLPFLGGAMVALVAVYADWALYKRANKSLGGKDG
KKVAGFSLEALPSELKLLICAGGIYASYLTFGVLQEQIFKYRGPQGERFT
ATLFLLWVQCLVNALFALCFMVGGSRSKQKIPLFNFGLTGTSYILAMLFS
NEALKYVSYPTQALGKSCKMVPVMLFGVLIRGKKYRPVEYFCVFLVTLGI
TMFQMYGGKKKAAPAVGGHGGKEEGGDSIYGVLLLLLSLVMDGVTGAVQD
KLKTLCKPTVHEFMFYTNTAGVLVCSVLVVATGQFSEGLSFCMDHPALFS
TMCWFSLTSALGQNFIFLTIKFFDALVLTTVTTTRKFFTILVSVVMYGHS
LNNKQWLAVLLVFFGLSGEVYDKYEKKRKAQHAKALAGGVKKE* back to topmRNA from alignment at scaffold_23:309860..313101+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8303 ID=mRNA_8303|Name=jgi.p|Nanoce1779_2|601490|organism=Nannochloropsis oceanica|type=mRNA|length=3242bp|location=Sequence derived from alignment at scaffold_23:309860..313101+ (Nannochloropsis oceanica)
ACAGACACTTCGTTCTCGAGAAAATCAGGAAGCCATGGCTGTAACCAGCC
TCACGGACTTGTGTTTTTGCGGTAAGTCTCAAGTCAAATGCTCTCACTCC
ATCAATGAGCTGCTGTGTGAGGGAGGGATTGAAGTTTGCATGGCAGCCAC
TGCAGCAACAGCCGCACCAGCACTGCTGCCTGCACGCTTGGTGGATGTGT
TGGTGTGCTGGAGCCTGATGTGGCTGGAGCCTGTTGCAAGCCAGGGTTTG
AAAGCATGCAGCGATGGTTGTGCGTGGGCATAGCTAGTGGTTGGGATCGG
GGACAAAAGTCGTGGTGGTTGGGGACGGCCGGGCTGCTGGACTGCTGCGG
AGGCCACGACACGCGGACATGCACACATTTACCAACACACCCTCTCTACC
ACACAAACAAGGCCTTAAAGGCCATATGATTGGATCTCCCTCATCCTCAC
CCGGACTTGCGGGTATTTTCTCCCTCCGTCTGGGAAAAACATTTGTGATT
TTTTGGATTACGACAACTCTCACGCTCTCTCCGACACCATCCAACATAAC
CCGACAAATGAAAGGTCCCAAGATCCTCCTTCCTTTCCTAGGAGGGGCGA
TGGTGGCCCTGGTGGCTGTCTACGCGGACTGGGCCTTGTACAAACGGGCC
AATAAAAGCCTAGGCGGGAAGGACGGGAAGAAAGTAGCAGGATTCAGCCT
TGAGGCCCTGCCGAGCGAGCTCAAGCTCCTGATTTGTGCCGGGGGGATTT
ACGCGTCTTATTTGACGTTTGGGGTGTTGCAGGAGCAAATTTTTAAATAC
CGGGGGCCGCAGGGGGAGCGATTCACGGCGACTTTATTTTTGCTGTGGGT
TCAGTGTTTGGTGAATGCCTTGTTTGCACTTTGCTTTATGGTGGGCGGCT
CGAGGAGCAAGCAGAAAATCCCCCTCTTCAATTTCGGATTGACTGGCACG
AGTTATATTCTGGCCATGCTCTTTTCCAATGAGGCGCTGAAGTATGTATC
GTATCCGACACAGGCCCTGGGCAAGAGCTGCAAGATGGTGCCGGTCATGC
TGTTTGGGGTGCTGATTCGCGGAAAGAAATACCGGCCGGTGGAGTATTTC
TGTGTGTTTTTGGTGACGCTGGGTATCACGATGTTTCAGATGTATGGCGG
AAAGAAGAAGGCTGCTCCTGCCGTGGGGGGTCACGGAGGGAAGGAGGAGG
GAGGGGACTCGATTTACGGGGTGCTGCTGCTGTTGCTGTCGCTGGTGATG
GATGGGGTGACGGGCGCGGTCCAAGACAAGCTCAAGACGCTGTGCAAGCC
CACGGTGCATGAGTTCATGTTCTACACCAACACGGCGGGTGTGCTGGTCT
GTTCGGTCCTGGTGGTGGCCACGGGGCAGTTCTCCGAGGGGCTATCTTTT
TGCATGGATCACCCCGCCCTGTTCAGCACCATGTGCTGGTTCTCTCTCAC
CTCGGCGCTGGGCCAAAACTTCATCTTTTTGACAATCAAATTTTTTGATG
CTTTGGTCCTGACGACGGTGACGACGACAAGGAAATTCTTCACAATCTTG
GTGAGTGTGGTCATGTACGGCCATAGCCTGAACAATAAACAGTGGCTGGC
GGTGCTGCTCGTCTTCTTCGGCTTGTCGGGAGAGGTCTACGACAAATACG
AAAAGAAGAGGAAGGCCCAGCACGCCAAGGCACTTGCGGGGGGGGTAAAG
AAGGAGTAGATGAAGATATGGAAGGAGAGAGGAGAAAGACGTCCAATGCA
ACCATCTCTTCTATTCGCCTACATACATCCGGGCGTCACGTTTCAACACT
TTTGCCTGTCCTGTGAAGCTAATTGAGGAATTTCTATCTTTTTCGATATA
CTCTAAGACACTTTTTGAGAAAGAACGAGGGATGCAAGTGGAGGAAAAAG
AGAGAGCAAGGGCGCATAATCAGGATTGCCAAAGCAAACTTTGTGCGTTT
CTAAACAAATAAAGGGGCAGGCATTTTTGTGAGGGCTTCAAAAAATCAAA
GCCAGAAGGAAAATAAGTGAATTAGCTTGCTTGAGAGTTTTTTAGACTTG
TTATTTTCCCTTTCTATGAATGTATTGGACTTTCACTAAGGGAAGGATGA
AAGAAGCCAAAGCACAATCAGCAACTGCAAAGGAAGAACAATTAATTACA
GGCACTCCTCTACCAAAAGCAAGTATGTCTGATCACCATTCTATCGTATA
ACAATTTAAACCCCCGTTTGTGCGTGGTGTGAGGGGTGTGTACGTGTGTA
TACGTGTCCAGCTTTATTGTAAAATAATGCTCTATACACGCTTCTTTCCT
GTCCTCTCACAACCCACTTCGTTTCCATTTTTACTCGGAGCGAGAGGCGA
GGTAGAGGGAATGGAGGGTCGCTGATGTGCACAGAAGAATGCTAAGGGTG
CTCCCCACTAGCACCATATGACAGGAGGTTTTATTGAGCACGTGCTGCTT
GCGATGCCGGATCTTGGGAGGGAGGAGAGGAGGGAGGGAAGGAGGATGGA
TGGATGGTGTAAGTGTTCTCTCCTCCCTCATGCTAAAATGATGACTCGTG
CTCCTTTCGCTCCGTCCCCCCGCCGATTTAGCCCATGCCTCGAGGTAGAA
GGCAGGAGGCAAGGCCCTTCTATCTCATTCTCCTCCTCGTCTCCCTCGCA
CCCCCCTTACCCCTTCCGATCTGCCCCCCCACTTCCCATTCGTACCTTGA
GATAGAAGGCGCACGGCAGGGTCAGGCAAAGCAAAAATCCCATACTCGAG
CCGCACAGGCTCCAAATAAACTGTTTAATGGATTCGTTCGCGGCGGAAGC
GCACGCGTTGTATAAATAAAAGGTGGGCGAATGAGTGGGTGAGCAACTGC
ACACATGTCGCCGTCGTGCCGGGATAATGAGAGAAAAGTGAGAGACGCGA
GACCGACCAAATCGGGGGAAATCAATTTAAATTGAACAAGACAATAAACC
AATCAATCGAATCAAGCCCGGTTTGCCCCCTTCTTCTCCTGTCTGTCCGT
TTGGTCTTACCCCCCCCTTACCGAGATCCCGGGCGCGGACATGGCGGCCC
GATATCCGCCTATGAGGAGGAAGAGCGTCACCAGAAAGTGCCTGAGGGCC
TGGGAAGGGAGCGACGGAGGGAGAGGGCGAGGAAGCATCAACAAATGTGT
GTTACGTCATTTTCCTCTATTGCTCTTGTCATCCCTCCTTCTTCTCCTTT
CCCCCTTCCTCTTTCCCTACCTGCAGCGCCTCCGCCCTTTCG back to topCoding sequence (CDS) from alignment at scaffold_23:309860..313101+ >mRNA_8303 ID=mRNA_8303|Name=jgi.p|Nanoce1779_2|601490|organism=Nannochloropsis oceanica|type=CDS|length=2364bp|location=Sequence derived from alignment at scaffold_23:309860..313101+ (Nannochloropsis oceanica)
ATGGCTGTAACCAGCCTCACGGACTTGTGTTTTTGCGGTCCCAAGATCCT
CCTTCCTTTCCTAGGAGGGGCGATGGTGGCCCTGGTGGCTGTCTACGCGG
ACTGGGCCTTGTACAAACGGGCCAATAAAAGCCTAGGCGGGAAGGACGGG
AAGAAAGTAGCAGGATTCAGCCTTGAGGCCCTGCCGAGCGAGCTCAAGCT
CCTGATTTGTGCCGGGGGGATTTACGCGTCTTATTTGACGTTTGGGGTGT
TGCAGGAGCAAATTTTTAAATACCGGGGGCCGCAGGGGGAGCGATTCACG
GCGACTTTATTTTTGCTGTGGGTTCAGTGTTTGGTGAATGCCTTGTTTGC
ACTTTGCTTTATGGTGGGCGGCTCGAGGAGCAAGCAGAAAATCCCCCTCT
TCAATTTCGGATTGACTGGCACGAGTTATATTCTGGCCATGCTCTTTTCC
AATGAGGCGCTGAAGTATGTATCGTATCCGACACAGGCCCTGGGCAAGAG
CTGCAAGATGGTGCCGGTCATGCTGTTTGGGGTGCTGATTCGCGGAAAGA
AATACCGGCCGGTGGAGTATTTCTGTGTGTTTTTGGTGACGCTGGGTATC
ACGATGTTTCAGATGTATGGCGGAAAGAAGAAGGCTGCTCCTGCCGTGGG
GGGTCACGGAGGGAAGGAGGAGGGAGGGGACTCGATTTACGGGGTGCTGC
TGCTGTTGCTGTCGCTGGTGATGGATGGGGTGACGGGCGCGGTCCAAGAC
AAGCTCAAGACGCTGTGCAAGCCCACGGTGCATGAGTTCATGTTCTACAC
CAACACGGCGGGTGTGCTGGTCTGTTCGGTCCTGGTGGTGGCCACGGGGC
AGTTCTCCGAGGGGCTATCTTTTTGCATGGATCACCCCGCCCTGTTCAGC
ACCATGTGCTGGTTCTCTCTCACCTCGGCGCTGGGCCAAAACTTCATCTT
TTTGACAATCAAATTTTTTGATGCTTTGGTCCTGACGACGGTGACGACGA
CAAGGAAATTCTTCACAATCTTGGTGAGTGTGGTCATGTACGGCCATAGC
CTGAACAATAAACAGTGGCTGGCGGTGCTGCTCGTCTTCTTCGGCTTGTC
GGGAGAGGTCTACGACAAATACGAAAAGAAGAGGAAGGCCCAGCACGCCA
AGGCACTTGCGGGGGGGGTAAAGAAGGAGTAGATGGCTGTAACCAGCCTC
ACGGACTTGTGTTTTTGCGGTCCCAAGATCCTCCTTCCTTTCCTAGGAGG
GGCGATGGTGGCCCTGGTGGCTGTCTACGCGGACTGGGCCTTGTACAAAC
GGGCCAATAAAAGCCTAGGCGGGAAGGACGGGAAGAAAGTAGCAGGATTC
AGCCTTGAGGCCCTGCCGAGCGAGCTCAAGCTCCTGATTTGTGCCGGGGG
GATTTACGCGTCTTATTTGACGTTTGGGGTGTTGCAGGAGCAAATTTTTA
AATACCGGGGGCCGCAGGGGGAGCGATTCACGGCGACTTTATTTTTGCTG
TGGGTTCAGTGTTTGGTGAATGCCTTGTTTGCACTTTGCTTTATGGTGGG
CGGCTCGAGGAGCAAGCAGAAAATCCCCCTCTTCAATTTCGGATTGACTG
GCACGAGTTATATTCTGGCCATGCTCTTTTCCAATGAGGCGCTGAAGTAT
GTATCGTATCCGACACAGGCCCTGGGCAAGAGCTGCAAGATGGTGCCGGT
CATGCTGTTTGGGGTGCTGATTCGCGGAAAGAAATACCGGCCGGTGGAGT
ATTTCTGTGTGTTTTTGGTGACGCTGGGTATCACGATGTTTCAGATGTAT
GGCGGAAAGAAGAAGGCTGCTCCTGCCGTGGGGGGTCACGGAGGGAAGGA
GGAGGGAGGGGACTCGATTTACGGGGTGCTGCTGCTGTTGCTGTCGCTGG
TGATGGATGGGGTGACGGGCGCGGTCCAAGACAAGCTCAAGACGCTGTGC
AAGCCCACGGTGCATGAGTTCATGTTCTACACCAACACGGCGGGTGTGCT
GGTCTGTTCGGTCCTGGTGGTGGCCACGGGGCAGTTCTCCGAGGGGCTAT
CTTTTTGCATGGATCACCCCGCCCTGTTCAGCACCATGTGCTGGTTCTCT
CTCACCTCGGCGCTGGGCCAAAACTTCATCTTTTTGACAATCAAATTTTT
TGATGCTTTGGTCCTGACGACGGTGACGACGACAAGGAAATTCTTCACAA
TCTTGGTGAGTGTGGTCATGTACGGCCATAGCCTGAACAATAAACAGTGG
CTGGCGGTGCTGCTCGTCTTCTTCGGCTTGTCGGGAGAGGTCTACGACAA
ATACGAAAAGAAGAGGAAGGCCCAGCACGCCAAGGCACTTGCGGGGGGGG
TAAAGAAGGAGTAG back to top
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