jgi.p|Nanoce1779_2|267913, gene_9487 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|267913
Unique Namegene_9487
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_34:108295..115321 -

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Properties
Property NameValue
TranscriptId267999
ProteinId267913
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_34supercontigscaffold_34:108295..115321 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL052ncniL052Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G00500NO21G00500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|267913mRNA_9487-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|267913mRNA_9487Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|267913

>mRNA_9487-protein ID=mRNA_9487-protein|Name=jgi.p|Nanoce1779_2|267913|organism=Nannochloropsis oceanica|type=polypeptide|length=1936bp
MGNVPPFPMLAPATIVTMVQVEAGISIVGLTISLMALAYDHIIAKEPVRF
HAHMTIVLFIFDLLDAIPMVLSRTTFGHPWLCDAQGIAITILEVAIVLWN
SFMALQVYRWILLKQDTTSLRRQLQPAIIFIVSYSLINTIFWRLAVAPMD
GNADLWCWIPKYMPWSRFGSVYVYVYPSMLWVSWVFIQVYRRVVITPRKG
SSASVKQAAARLRVGRKLMLYLFCFLATWTFPVINRTVQMATGKTLPSLL
FLHVISKPSMGLWDSLVYGSVTAVVSSRLKVGKYRRHKQGDNPSLESVDP
AQAEGEGGREEEEGEWADEDVHWLDEPEEVMKLGMGGEVAMMEEGKGGKG
GMGMNGTEAEEAGRGEGERGGGGGGGEGGEGRREDRRRSSSVGASAIITA
AVAAATAAAGGGGKAAAAVASRKEGEDEGEEVVAVQMYDNTTAGLSKSKS
CSSNSSTTNISLISSSSSKRFKKEGAVGMRTSSPSSLVPSNSTSNGMTRS
RSFTTPFSSLTSAASSAAAAAAAALPSRSPKSKFSSPPSSPPVSTNRPSS
LPPPPPPPPLLASIFVSTYNCGSLPPSSLASFSPSSPLSSSPPPSFFLSS
WIPLNHDLYIIGVQELKGLQTLKTLLHAHLGGPSCYQMYGQEIGVVGGSS
AFAERLGAIALLVYARTEDVKRGVFEMTAVPKAGGQQVLQGKNLLVCRAG
NKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNASLRCVFRDADVA
GELFDVHLQYQHTIFLGDLNYRMLGTPEEVLVDIADAATKAKHDTQDHHQ
KKQKKRRRQQQQQQEQRLPMKEKVVVDEEEGRERGKKGSTDIPLVADAAR
TDEVSSPSSFASSPSSSCPPSISTSISTFTSPPAGRRPRSNSNSSSSSSS
SSSSNKTGDGNSSSSDEEVEEEEDETESIAEGTDPSLPPCPHWLAARYRG
LEAGAVPQAPNRRWNALVEARDELRKAQGMGCVLHGFIEHPISFPPSYRR
VRGEKGNAGDYTDVHRLRKAYSTYLDANGKTVEVLPPREGGGEEEGEDRE
EEGPTATPVLSRRGSGDSTPVTEGAKDGAKEGEGGKASWAWEDDDYDNRG
GGGKMIIHDTALAAAATATSSTVTTTTAITAAEAAATCKVRVPSYTDRIW
IHSLPGLGRALSFQAYELCDALLQSDHRPVSAVLTLDLRPALDTHRAYLY
AYAPRTPQQQQQLPPRTPTMIMKSKMSSFFNSASSSSSSSSSSSIKQQLS
AAGVGGGSSRSAKNELPAVCEKVAAGEAGEAGGGGGGGGGGGGGGRTGDS
SISNGGNHSVLVPGGKEGRKEGGKEGGKAGGDVGSKARPLLSLALSSPGP
PAGGDGEEGKEKDVNPSPSFSSSSSARARTPTAGSSTQSSPFTASSPSSP
SPSPSPAPSSSFFSKARARPSLSLPSAPLLHISSLSPSIGGRFKKWGGHK
AHSASSLTPSSSSAAAASATAAMAGVALTASLPSFPASSPTSTPLLVFYI
KLSNMSIAFQTPPFLPGLPPALPSGAPSTSRSMSSRTSGGGKEGGKEGRA
FIRSTSAIPTTHDSTLPPPSLRAPSSSFIGLANSSVLTSNDGTDPLPLPP
PVPPSHPPVARLAVLFPLPSENQLEHTHRTLEYLDATICHEWSTWSRDNK
SLLKSTSYHEWPQAGTEEGIVISAAVKVGGSLHALLKLVDGNGGEMAQAV
IPLPGPREGGREGGKEGGRKRVRVTASLTKHTAYRGELTCDVEVTKVKIH
RDSRGGQSGREGGREGGMTTAPSTAASSPGPSTPRAGTERHRREGGRDGG
REGGPKVHVENMQAVLEGKSFVPPPPPPPLPPPPSPPPSAVNPLRLPTSS
SGSSSSVPSSLPSSRSRIQSSTVPSCLNPSAATAKGGKADSPSRSSPPPS
SSAREEGKEKMGLVMPSVLSSLSVTEEDDDDGMMF*
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Synonyms
Publications