jgi.p|Nanoce1779_2|344442, gene_10472 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|344442
Unique Namegene_10472
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_52:2339..6233 -

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Properties
Property NameValue
TranscriptId344528
ProteinId344442
Product nameSignal peptide peptidase-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_52supercontigscaffold_52:2339..6233 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0042500aspartic endopeptidase activity, intramembrane cleaving
GO:0004190aspartic-type endopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL074ncniL074Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO30G00300NO30G00300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|344442mRNA_10472-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|344442mRNA_10472Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|344442

>mRNA_10472-protein ID=mRNA_10472-protein|Name=jgi.p|Nanoce1779_2|344442|organism=Nannochloropsis oceanica|type=polypeptide|length=458bp
MDWPWFIWAGLPTILSSTFVCYVGAMRHRDVKKVMAANKRRGGAAAEETQ
AQNVVLSARSALLMPVAGSLLLCTFYFLFSHLQLLVLLYMLAASFASLFF
VLAAPCGRMLHPLCPRRRQQQGVVGAVAGGLLLAWLMTGHYVLNNALGAC
LCVSMISFLHLPNLRIAALCLGSLFIYDIFWVFFSASVFGSNVMVEVATK
AALNPAASMGEALHLPLLKNAPASLQLPLKLLFPYYPSGPHHDRLAYSML
GLGDMAIPGLFLSFLLSFDDFLKATISKPSTPPSLQPSSYSYFSTGLVGY
VIGMCMALFCTRFFNIAQPVLLYLVPCMMGPVGMKAWRDSPHLSQLWSGE
FDASSALLPFLPPALDSGPQENGSDGQEEKGREGGREGGRGGGRKRILSW
GVGTVMGVEGGQEEGEGRKGKKEGGMAGGREGEKEGSMVLVPETECERGM
LPLASLV*
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Synonyms
Publications