Properties
| Property Name | Value |
|---|
| TranscriptId | 525748 |
| Track | FilteredModels2 |
| ProteinId | 525662 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:11252..12299 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3327 ID=mRNA_3327|Name=jgi.p|Nanoce1779_2|525662|organism=Nannochloropsis oceanica|type=mRNA|length=894bp
ATGGAGGGAGAAAGCGGAAGGGAACAGCCCCAGGATCAGTTCTGTCCTTA
TTTGTTGTCTTTTTATGATGCATATGCGGACTTTAAGTCATCGCGGCTAT
GCTTGGTGTATGAGGATGGTGGTTCGCTTGAAGACCTGGTCCGTGCTGGC
GGCTTTCGCGACGAGGACTTCCTGGCCGACGTGTCATATAACGTCTTGCG
GGGCTTGCACTACCTGCACGAGCGACACATGATCCATCGGGATATCAAGC
CGGGGAACCTCCTCATCTCATCTGACGGCTTTGTCAAGATCGGCGACTTC
GGCCTGGCTGTCTCTCTGGATGCGGCCCAAGATCAAGTGCAGGGAACGCA
ACGGTACATTGCGCCGGAGCGTCTCGAAGACGAGAAAGACCAACTGAGCC
CCAAGGCCGACATTTGGAGTTTCGGCCTATCGCTGTGGGCGCTTGCCGAG
GGAAAGTTTCCGTACGAGGACGCCGTGGGCGATGAGTTTGACTTGAGAAT
GGCGATTGTGAATCAGAACCTGGAACTTTCCTCTCAGGACTTTTCGCCCA
ATTTTCGAGAGTTCGTTTCCTTGTGCCTGAAGAAGAAGCCAGGGGAGCGC
TGGAGCGCTGAGGAGCTGCTTGACCACCCGTTCATCACGACCAAGGCTAG
TGTGCACTTGAAGGAGGCGGAGCTCCTGCAAATTTGCGAGGCGATGAAAA
CGTACCTGACCACGAACCGCGAGAACGCCGTATTTTCGCATCAGATGATT
CGGCGGCTGGCAGAAGAGTTGCGGTTAGACCAGGCGTTTGTGGAGCACAC
AGTCAGGGAGCAGTTGGCGGGCGTGCCGTATGCGATGGAAACCCCGCGGA
TGCCCCAGAAGCTGTGGACGAAAATGAATCAGTGGTTTAAGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|525662 >mRNA_3327-protein ID=mRNA_3327-protein|Name=jgi.p|Nanoce1779_2|525662|organism=Nannochloropsis oceanica|type=polypeptide|length=298bp
MEGESGREQPQDQFCPYLLSFYDAYADFKSSRLCLVYEDGGSLEDLVRAG
GFRDEDFLADVSYNVLRGLHYLHERHMIHRDIKPGNLLISSDGFVKIGDF
GLAVSLDAAQDQVQGTQRYIAPERLEDEKDQLSPKADIWSFGLSLWALAE
GKFPYEDAVGDEFDLRMAIVNQNLELSSQDFSPNFREFVSLCLKKKPGER
WSAEELLDHPFITTKASVHLKEAELLQICEAMKTYLTTNRENAVFSHQMI
RRLAEELRLDQAFVEHTVREQLAGVPYAMETPRMPQKLWTKMNQWFK* back to topmRNA from alignment at scaffold_6:11252..12299- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3327 ID=mRNA_3327|Name=jgi.p|Nanoce1779_2|525662|organism=Nannochloropsis oceanica|type=mRNA|length=1048bp|location=Sequence derived from alignment at scaffold_6:11252..12299- (Nannochloropsis oceanica)
ATGGAGGGAGAAAGCGGAAGGGAACAGCCCCAGGATCAGTTCTGTCCTTA
TTTGTTGTCTTTTTATGATGCATATGCGGACTTTAAGTCATCGCGGCTAT
GCTTGGTGTATGAGTACATGTACGTTTGAGGGTATCAGGTTGGAGGGGCG
AAAGGAGAAAATGAGGAAGGATACGTGGTCGTCGTTCGTATACCTTTTTT
CCTTCACTGTTTTCTAACTCCACCACAATTCGTGCCCCTCTCTGTCTATC
GCTTTTAAATTAACCAGGGATGGTGGTTCGCTTGAAGACCTGGTCCGTGC
TGGCGGCTTTCGCGACGAGGACTTCCTGGCCGACGTGTCATATAACGTCT
TGCGGGGCTTGCACTACCTGCACGAGCGACACATGATCCATCGGGATATC
AAGCCGGGGAACCTCCTCATCTCATCTGACGGCTTTGTCAAGATCGGCGA
CTTCGGCCTGGCTGTCTCTCTGGATGCGGCCCAAGATCAAGTGCAGGGAA
CGCAACGGTACATTGCGCCGGAGCGTCTCGAAGACGAGAAAGACCAACTG
AGCCCCAAGGCCGACATTTGGAGTTTCGGCCTATCGCTGTGGGCGCTTGC
CGAGGGAAAGTTTCCGTACGAGGACGCCGTGGGCGATGAGTTTGACTTGA
GAATGGCGATTGTGAATCAGAACCTGGAACTTTCCTCTCAGGACTTTTCG
CCCAATTTTCGAGAGTTCGTTTCCTTGTGCCTGAAGAAGAAGCCAGGGGA
GCGCTGGAGCGCTGAGGAGCTGCTTGACCACCCGTTCATCACGACCAAGG
CTAGTGTGCACTTGAAGGAGGCGGAGCTCCTGCAAATTTGCGAGGCGATG
AAAACGTACCTGACCACGAACCGCGAGAACGCCGTATTTTCGCATCAGAT
GATTCGGCGGCTGGCAGAAGAGTTGCGGTTAGACCAGGCGTTTGTGGAGC
ACACAGTCAGGGAGCAGTTGGCGGGCGTGCCGTATGCGATGGAAACCCCG
CGGATGCCCCAGAAGCTGTGGACGAAAATGAATCAGTGGTTTAAGTAG back to topCoding sequence (CDS) from alignment at scaffold_6:11252..12299- >mRNA_3327 ID=mRNA_3327|Name=jgi.p|Nanoce1779_2|525662|organism=Nannochloropsis oceanica|type=CDS|length=1788bp|location=Sequence derived from alignment at scaffold_6:11252..12299- (Nannochloropsis oceanica)
GGATGGTGGTTCGCTTGAAGACCTGGTCCGTGCTGGCGGCTTTCGCGACG
AGGACTTCCTGGCCGACGTGTCATATAACGTCTTGCGGGGCTTGCACTAC
CTGCACGAGCGACACATGATCCATCGGGATATCAAGCCGGGGAACCTCCT
CATCTCATCTGACGGCTTTGTCAAGATCGGCGACTTCGGCCTGGCTGTCT
CTCTGGATGCGGCCCAAGATCAAGTGCAGGGAACGCAACGGTACATTGCG
CCGGAGCGTCTCGAAGACGAGAAAGACCAACTGAGCCCCAAGGCCGACAT
TTGGAGTTTCGGCCTATCGCTGTGGGCGCTTGCCGAGGGAAAGTTTCCGT
ACGAGGACGCCGTGGGCGATGAGTTTGACTTGAGAATGGCGATTGTGAAT
CAGAACCTGGAACTTTCCTCTCAGGACTTTTCGCCCAATTTTCGAGAGTT
CGTTTCCTTGTGCCTGAAGAAGAAGCCAGGGGAGCGCTGGAGCGCTGAGG
AGCTGCTTGACCACCCGTTCATCACGACCAAGGCTAGTGTGCACTTGAAG
GAGGCGGAGCTCCTGCAAATTTGCGAGGCGATGAAAACGTACCTGACCAC
GAACCGCGAGAACGCCGTATTTTCGCATCAGATGATTCGGCGGCTGGCAG
AAGAGTTGCGGTTAGACCAGGCGTTTGTGGAGCACACAGTCAGGGAGCAG
TTGGCGGGCGTGCCGTATGCGATGGAAACCCCGCGGATGCCCCAGAAGCT
GTGGACGAAAATGAATCAGTGGTTTAAGTAGATGGAGGGAGAAAGCGGAA
GGGAACAGCCCCAGGATCAGTTCTGTCCTTATTTGTTGTCTTTTTATGAT
GCATATGCGGACTTTAAGTCATCGCGGCTATGCTTGGTGTATGAGGATGG
TGGTTCGCTTGAAGACCTGGTCCGTGCTGGCGGCTTTCGCGACGAGGACT
TCCTGGCCGACGTGTCATATAACGTCTTGCGGGGCTTGCACTACCTGCAC
GAGCGACACATGATCCATCGGGATATCAAGCCGGGGAACCTCCTCATCTC
ATCTGACGGCTTTGTCAAGATCGGCGACTTCGGCCTGGCTGTCTCTCTGG
ATGCGGCCCAAGATCAAGTGCAGGGAACGCAACGGTACATTGCGCCGGAG
CGTCTCGAAGACGAGAAAGACCAACTGAGCCCCAAGGCCGACATTTGGAG
TTTCGGCCTATCGCTGTGGGCGCTTGCCGAGGGAAAGTTTCCGTACGAGG
ACGCCGTGGGCGATGAGTTTGACTTGAGAATGGCGATTGTGAATCAGAAC
CTGGAACTTTCCTCTCAGGACTTTTCGCCCAATTTTCGAGAGTTCGTTTC
CTTGTGCCTGAAGAAGAAGCCAGGGGAGCGCTGGAGCGCTGAGGAGCTGC
TTGACCACCCGTTCATCACGACCAAGGCTAGTGTGCACTTGAAGGAGGCG
GAGCTCCTGCAAATTTGCGAGGCGATGAAAACGTACCTGACCACGAACCG
CGAGAACGCCGTATTTTCGCATCAGATGATTCGGCGGCTGGCAGAAGAGT
TGCGGTTAGACCAGGCGTTTGTGGAGCACACAGTCAGGGAGCAGTTGGCG
GGCGTGCCGTATGCGATGGAAACCCCGCGGATGCCCCAGAAGCTGTGGAC
GAAAATGAATCAGTGGTTTAAGTAGATGGAGGGAGAAAGCGGAAGGGAAC
AGCCCCAGGATCAGTTCTGTCCTTATTTGTTGTCTTTTTATGATGCATAT
GCGGACTTTAAGTCATCGCGGCTATGCTTGGTGTATGA back to top
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