jgi.p|Nanoce1779_2|629825, gene_4188 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|629825
Unique Namegene_4188
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:1079387..1083808 -

Link to JBrowse

Properties
Property NameValue
TranscriptId629911
ProteinId629825
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:1079387..1083808 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629825mRNA_4188-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629825mRNA_4188Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|629825

>mRNA_4188-protein ID=mRNA_4188-protein|Name=jgi.p|Nanoce1779_2|629825|organism=Nannochloropsis oceanica|type=polypeptide|length=681bp
MNRTDRRSHPSFIVPRPLSYCNPIPISIPHPLPSSLTTNHPAMASDDEDD
MEEELFGLPAGASLGNAVAEEAPAPDLPLLTVVERLVFAGAESTELLGCV
DGVDTVKRGREGGGLPPSILQAARFVLEGKYLCVLTETPVGQTFFAAAAN
AAADPTSGTEERVRQALLAALTSTTNLLGATADSSSNSSSSNSSSTTPER
AFECLCVGIALLNLYLQANYTGPHPDLTVQQAVKSFLSPFLSDSSSSNSR
SNSSSSSSSSDTKADELMAVKNNPFEADEDIALSLLSADGESPYLQCVLP
QALLLARLLLHSLALPSLASYLTPLVLHDTTGKPTLPCNPSLPPFLPPVL
ATSKAWSARACVTHRRLLPGRRPTLGLWTEFSLLLGPQELGEGVREGGRV
CDEWRTREWLERGLGEYHFREGDEGRRAFESAKKEAGMVCRMTAMLGKRT
KFQEKALPQMVLVVESCRGEGGGEGGGKGRGEGPGKPLEVGHGQDSVLLE
KTEFIGQLEDEGKEGEGGEGIEGAKKKLHPLEQAVLLALCLEEGRGSAAS
GDGGLTAEQMTPYVARVLEHPANWMVYSTALLERSWLDFGSSYGRERAVM
QLQALVDQHHPSSSSPSSSSSSSSSSSSSSTDDAPVHVRLRYLHTIFYPA
QWELKRDLAERYASLGVVASAADLFLELAM*
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Synonyms
Publications