jgi.p|Nanoce1779_2|670379, gene_4579 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|670379
Unique Namegene_4579
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:58854..67764 -

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Properties
Property NameValue
TranscriptId670465
ProteinId670379
Product namecarboxylase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:58854..67764 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0009374biotin binding
GO:0003989acetyl-CoA carboxylase activity
GO:0003824catalytic activity
GO:0016874ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006633fatty acid biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0009317acetyl-CoA carboxylase complex
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G00270NO15G00270Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670379mRNA_4579-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670379mRNA_4579Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|670379

>mRNA_4579-protein ID=mRNA_4579-protein|Name=jgi.p|Nanoce1779_2|670379|organism=Nannochloropsis oceanica|type=polypeptide|length=1307bp
MGDKGQPLFTDVCSTDLLGFAFAGRSYKDQLDEAIAKTQGFCGVDVTRRT
LSYKGLAVPVVWVEHNFAFLGGSLGCAEGERITRAFELAKEEHLPIVVQC
NSGGARMQEGTLSLMQMAKVAVAVEALRRDGIPFLSVLVDPTYGGVSASY
AMQADVRLAVADARIGFAGPAVILNTMCQMDQAKYDKTCPSMFQSAEYVS
EHGQIDYVVDPAKEGLDRQAAVDVACARVLSLLCFSSSLTKASSSTAFSS
SSSSSSISHPAEELSETTAQSEGKGEDEGEGGREGGWRTSFDYTQSRKID
RLQCQDIMEGIFEDFTELKGDGRVASDVCIKGGLARFGSQQVLVIGCTKG
HTPQAMQASNYGMPAPAGYRTALRLFALAERFKLPIITLVDTCGAWPSFQ
AESDGQSEAIATNLTAMSSLTVPIVTVIVGEGGSGGALGIGMGNKIGMLS
GAYFGVISPEGAASILGRYQDEAHKAQQFPEDCQALATAQQIYANQLQEL
GVVDKILYEKPGESFEHCPHLRASLRNFLADSLKELGALSADELINQRFQ
KYRAMGKYALYDEGKKHALLKEITAAVGDRRKPKKTASKHNPTPGRLLSF
IAHETVHGERSFFKGKALLSSLPKVAPSIPCLRHAFEGFHAANGPPRTAK
MVLDSQGPEAVAIWVLEQKGVLVTDTTMRDAHQSLLATRVRTVDIVEGAK
IANQVLSSAFSFECWGGATYDVCYRFLHEDPWERLEGIRKALPHSLLQML
VRGANAVGYTSYPDNVVEEFIALAAKKGIDLFRIFDCFNDVSQMKVSIDA
VRKAGKIAEVCICYTGDVLTSTIYNVDYYRTLTQQCVAAGAHIIAIKDMA
GLLKPRAAAPLMQAIKEVTNLPVHFHTHDTSGASIASAMAMANAGCHIID
FATAALANCTSQPSLNAFLAAMAGDDRDPGINYLAVEPYDMYWAKVREMY
APFECGMKSGTARVYDHEIPGGQYSNLMVQCQAMGIWDRWEAVLDMYRDV
NTLFGDVVKVTPSSKCVGDLAIYLVTRGLSVADVTDESKAAGIDFPASVI
DLLEGRLGFPHRGFPAQVQKSILRGRPPLSVTPSAALAPADFAAEKRKLD
SKWGIDATPEDVISSLLYPKVFADYLKFFSTHGPGPRFLPTPCFYYGMEI
GKEFTQTFSLPSSLVKQELGLENNSSSTSSDDDSLSVSVTLNRVGPLRKG
EYRTLYFSVNGQAMEVEVQDTSGEALFDGPMADKAVAGQVGSPMPGAVDK
ILVGAGTRVEADTPLCVIVAMKMEVMVKAPKAGLVEEMYVEEGGKVVEGA
LLMSIV*
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Synonyms
Publications