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Properties
| Property Name | Value |
|---|
| TranscriptId | 536070 |
| Track | FilteredModels2 |
| ProteinId | 535984 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:1268701..1270370 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1698 ID=mRNA_1698|Name=jgi.p|Nanoce1779_2|535984|organism=Nannochloropsis oceanica|type=mRNA|length=1670bp
AAATCATCATTTCCATTTTCATTTTATCTTTTTTGTTGTTGATTCTTCCG
AGAGATCAATATTGATTATGCCGTAGCCTCTTTATACATCGAAATATTTG
ATTGTCGTTTGTATCCATCAACAGGGACGGGGGGGTGTTGGCGAATAATC
CAGGCTTCATCCAACCTCCTACCATTCTCCTTTCTTCGATGGGGGACAAT
AGAAGAGCTGTAGCTCTCTTACGGATGGTGATGGAATAGTGATCGTATTC
TTTGGATAATCACAGATTCATTAGTATCCTATGTACGATAGTCTGGCCCA
GTATAATAAGCGTCTAAACCCTTAAAGGACTGATAAACAATGTAGTCCAT
GAAGCCCTACCACTATACCCCGTCTCTTGTTCTGTTCTGTGCATCGTTCT
TGTGCAGTGTGTGTGTGCTCTCTAAATTTTGGCTGACAGAATATTTGGGT
GTATCGTAGTTAGGAAAGCTGCCGTGTTTGTTGTCCCATCCTGCCCTACA
ATTAAAGCTCGCCTTTCTCATCATCTTTTCCTCCTCCCCCACTCATCAGC
CCCCCCTCTCGTCTCCACCGCCGCCCGTGCCATCCTTTACATGGCCTCTC
TTCGCCAGGGAGCTCCACGCTATTTGATATCGCTCGCACTTTTCTTCTCT
TCGTCGTTACCCTTCCAGCTTACGCAGCACTTCGTCCTCGCGCACGCTCA
GATGGCCTCTACACTCAAGCAGTCCGCGGCCCCCAGCTCTTTGCAAGACG
CGGGGGTCATTCCGGACGTCTTGGACTGCTTCTCCCCAGGTATACAGATC
CGCGTTGCGTATGATAATCATTTAGTCACTCCAGGTGCGACCCTTCTTCC
TGTTCAAGCCGTGCACATGCCCACGGTAACGCTCGAAGGCTCCTACCCAG
GTCGGCTCTACACTCTTGTCATGTCCGATCCTGATGCTCCCTCCCCCGAG
CACCCTACCCACCGTGAATGGCTGCATTGGATCGTCACAGACATCCCAGG
AGGTGCAAAAGACATAGCGGAAGGCACGCAAGTCGCGGCTTACATGCCTC
CGACCCCTCCGAAGGGAACACATCGATATGTGTTTACTGTTATGGAACAA
CCGGGGCGCGAATCACGGGTTTTGCGTCCACCCATGCAACGGGGAGGGTT
TCGGACCCGTGCCTTCTTGAAGGAGGGGGGAATGGAGGTGGTAGGAGCGA
CGTTCTTCTATGCAGCGCATCAGAATAATTAAGACGGGGGAAGTAGAAGG
GAGCGAAGGAGGGAGGTGGAAATAAATTAATGGACTAAGGTGACGGAGGG
AGGGCCAGGGGTTAAGTTAAAGAAGCAAAGACAACGGTGCCCAAGACTGT
TGTACCCTGAGGGGCCGTTAAGCGGCTATCACTTGTACATACAGCGACGG
AGAGAGAGTGGGGAATTTACGGTCTAGCAGGAATTGTTCAAGGTTTAAAT
ATCCGTTTAGCATGGCCGTTATATTCATTGGCACAAAAGACAAACACGCT
TGAGATTGAGAAGATGGTTCGCACGATAGAAGTCGGGGTTGGAGGTCGAT
GGAATTCCCTATGCGATGGCCGTCATCAATAATAGGCCATGACAGCCAGG
GAAGATTCGCAGCTTGGCAATGACCGACATTGAGTCAAACAAACCGAGGC
AAAACAACCAAAACAGCGTC back to topprotein sequence of jgi.p|Nanoce1779_2|535984 >mRNA_1698-protein ID=mRNA_1698-protein|Name=jgi.p|Nanoce1779_2|535984|organism=Nannochloropsis oceanica|type=polypeptide|length=214bp
MASLRQGAPRYLISLALFFSSSLPFQLTQHFVLAHAQMASTLKQSAAPSS
LQDAGVIPDVLDCFSPGIQIRVAYDNHLVTPGATLLPVQAVHMPTVTLEG
SYPGRLYTLVMSDPDAPSPEHPTHREWLHWIVTDIPGGAKDIAEGTQVAA
YMPPTPPKGTHRYVFTVMEQPGRESRVLRPPMQRGGFRTRAFLKEGGMEV
VGATFFYAAHQNN* back to topmRNA from alignment at scaffold_1:1268701..1270370- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1698 ID=mRNA_1698|Name=jgi.p|Nanoce1779_2|535984|organism=Nannochloropsis oceanica|type=mRNA|length=1670bp|location=Sequence derived from alignment at scaffold_1:1268701..1270370- (Nannochloropsis oceanica)
AAATCATCATTTCCATTTTCATTTTATCTTTTTTGTTGTTGATTCTTCCG
AGAGATCAATATTGATTATGCCGTAGCCTCTTTATACATCGAAATATTTG
ATTGTCGTTTGTATCCATCAACAGGGACGGGGGGGTGTTGGCGAATAATC
CAGGCTTCATCCAACCTCCTACCATTCTCCTTTCTTCGATGGGGGACAAT
AGAAGAGCTGTAGCTCTCTTACGGATGGTGATGGAATAGTGATCGTATTC
TTTGGATAATCACAGATTCATTAGTATCCTATGTACGATAGTCTGGCCCA
GTATAATAAGCGTCTAAACCCTTAAAGGACTGATAAACAATGTAGTCCAT
GAAGCCCTACCACTATACCCCGTCTCTTGTTCTGTTCTGTGCATCGTTCT
TGTGCAGTGTGTGTGTGCTCTCTAAATTTTGGCTGACAGAATATTTGGGT
GTATCGTAGTTAGGAAAGCTGCCGTGTTTGTTGTCCCATCCTGCCCTACA
ATTAAAGCTCGCCTTTCTCATCATCTTTTCCTCCTCCCCCACTCATCAGC
CCCCCCTCTCGTCTCCACCGCCGCCCGTGCCATCCTTTACATGGCCTCTC
TTCGCCAGGGAGCTCCACGCTATTTGATATCGCTCGCACTTTTCTTCTCT
TCGTCGTTACCCTTCCAGCTTACGCAGCACTTCGTCCTCGCGCACGCTCA
GATGGCCTCTACACTCAAGCAGTCCGCGGCCCCCAGCTCTTTGCAAGACG
CGGGGGTCATTCCGGACGTCTTGGACTGCTTCTCCCCAGGTATACAGATC
CGCGTTGCGTATGATAATCATTTAGTCACTCCAGGTGCGACCCTTCTTCC
TGTTCAAGCCGTGCACATGCCCACGGTAACGCTCGAAGGCTCCTACCCAG
GTCGGCTCTACACTCTTGTCATGTCCGATCCTGATGCTCCCTCCCCCGAG
CACCCTACCCACCGTGAATGGCTGCATTGGATCGTCACAGACATCCCAGG
AGGTGCAAAAGACATAGCGGAAGGCACGCAAGTCGCGGCTTACATGCCTC
CGACCCCTCCGAAGGGAACACATCGATATGTGTTTACTGTTATGGAACAA
CCGGGGCGCGAATCACGGGTTTTGCGTCCACCCATGCAACGGGGAGGGTT
TCGGACCCGTGCCTTCTTGAAGGAGGGGGGAATGGAGGTGGTAGGAGCGA
CGTTCTTCTATGCAGCGCATCAGAATAATTAAGACGGGGGAAGTAGAAGG
GAGCGAAGGAGGGAGGTGGAAATAAATTAATGGACTAAGGTGACGGAGGG
AGGGCCAGGGGTTAAGTTAAAGAAGCAAAGACAACGGTGCCCAAGACTGT
TGTACCCTGAGGGGCCGTTAAGCGGCTATCACTTGTACATACAGCGACGG
AGAGAGAGTGGGGAATTTACGGTCTAGCAGGAATTGTTCAAGGTTTAAAT
ATCCGTTTAGCATGGCCGTTATATTCATTGGCACAAAAGACAAACACGCT
TGAGATTGAGAAGATGGTTCGCACGATAGAAGTCGGGGTTGGAGGTCGAT
GGAATTCCCTATGCGATGGCCGTCATCAATAATAGGCCATGACAGCCAGG
GAAGATTCGCAGCTTGGCAATGACCGACATTGAGTCAAACAAACCGAGGC
AAAACAACCAAAACAGCGTC back to topCoding sequence (CDS) from alignment at scaffold_1:1268701..1270370- >mRNA_1698 ID=mRNA_1698|Name=jgi.p|Nanoce1779_2|535984|organism=Nannochloropsis oceanica|type=CDS|length=642bp|location=Sequence derived from alignment at scaffold_1:1268701..1270370- (Nannochloropsis oceanica)
ATGGCCTCTCTTCGCCAGGGAGCTCCACGCTATTTGATATCGCTCGCACT
TTTCTTCTCTTCGTCGTTACCCTTCCAGCTTACGCAGCACTTCGTCCTCG
CGCACGCTCAGATGGCCTCTACACTCAAGCAGTCCGCGGCCCCCAGCTCT
TTGCAAGACGCGGGGGTCATTCCGGACGTCTTGGACTGCTTCTCCCCAGG
TATACAGATCCGCGTTGCGTATGATAATCATTTAGTCACTCCAGGTGCGA
CCCTTCTTCCTGTTCAAGCCGTGCACATGCCCACGGTAACGCTCGAAGGC
TCCTACCCAGGTCGGCTCTACACTCTTGTCATGTCCGATCCTGATGCTCC
CTCCCCCGAGCACCCTACCCACCGTGAATGGCTGCATTGGATCGTCACAG
ACATCCCAGGAGGTGCAAAAGACATAGCGGAAGGCACGCAAGTCGCGGCT
TACATGCCTCCGACCCCTCCGAAGGGAACACATCGATATGTGTTTACTGT
TATGGAACAACCGGGGCGCGAATCACGGGTTTTGCGTCCACCCATGCAAC
GGGGAGGGTTTCGGACCCGTGCCTTCTTGAAGGAGGGGGGAATGGAGGTG
GTAGGAGCGACGTTCTTCTATGCAGCGCATCAGAATAATTAA back to top
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