jgi.p|Nanoce1779_2|542585, gene_5099 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|542585
Unique Namegene_5099
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:456622..460984 +

Link to JBrowse

Properties
Property NameValue
TranscriptId542671
ProteinId542585
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:456622..460984 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02090NO11G02090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|542585mRNA_5099-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|542585mRNA_5099Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|542585

>mRNA_5099-protein ID=mRNA_5099-protein|Name=jgi.p|Nanoce1779_2|542585|organism=Nannochloropsis oceanica|type=polypeptide|length=1194bp
MSNNFSKRLNERTPPGSASPRPPAPPYVYPPPQPSIISPGHEMMGHPRPM
MHFRPPLPSSFQLHTSHALLAPPPTMMPTPTTFLSRGSWEEGLGELLKNE
SNTRLLSVAKYGLRMEVPVVGKTTPYTATTTLTAASAPADDMMSHRLPQH
EQQQQQEEDAAQSWNSDPRAALDLGVITTFGSIEEVEEETYVPKGYEGAP
AIILSMHKHMLGEEGGEDEDEKGQDNGEGMLNRMIVGEGKREKRKRSQPS
CVSRSMRIINEAPGPYLLREVLILPRDEKCAALWVEVEVGGRVYSSKTGL
EPFLRERSPGKSTAPAVGTDSLLVGGITEGCVSVLAMPGTESSTVKKWVL
LRVEGPGVGPAHDLLYHSFVVARKVVATVVDASAQSLLNVEARPFVPRAL
KQYFDAPYNVIFAHPSTPPPFQPKGMASVLQALPQHFLSKNLQTRLAAYK
AAPAGSRGDPYVFFNVTQNPKTVGDYCGNMQAMLFLEEAQTAEDIKRYDL
FGVPIIYQERPVGRLDMPLVATITVPGASEKRPPLAYGDEVLLRPACPPS
FASGGEKVIMEIRAAVLETKEERVKLLLPSNFPTETLPSESRFHVRFTYD
RYGYRFLHQALQHFMKSATQKGREMTSAGHCLFPCADGEGEAEGGKEETE
VEGREGGKVVVAEEGGMRWVNSLINKEQRQAVMDIVNRTHGRLPYILYGP
PGTGKTLTVIEAILQICRHHPEARVLAVAPSDVAADILAERLAEYLTPTR
LFRLNWYQRLTASMKPALLRYSCWDPSSSLFSLPANDPCSILARQVIVST
CATSGILSLLQRPGQPLISFTHILVDEASQALQPEVMVPLSFAGPDTGVV
LAGDPKQLGAITRNPLVQELGLAQSLQERLMETRAVYSVPHTAAASTAAA
NEDGGEGGRSGHGRCLLMLFRNYRSHQAIIEVPSRLFYSQTLEQHGDESL
INSCLSWEMLPGSSSATARGMSPYSQAGGGGFPILFWGCLGDHMHELDSP
SFFNVVECGKVLEMVQALLGSKKVQVRLQDIAIISAFRKQVLKLRSLLRE
NGYGAINVGQVEDFQGQETKVVIISTVLSGRHPNEVNEQLGFLGHPKRFN
VAITRAQALTVIVGNPYALWEDVGGWRQLLEFCAAHGAVRGSSGPLGTPD
VESVESLLDAIANESLLGKASSSDIYPTQLEDYFSDSPWRLLL*
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Synonyms
Publications